RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 POLR3EQ9NVU0 708 aa9.52□□□□□ -0.89
USP8-216ENST00000561206 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
USP8-216ENST00000561206 C2CD2LO14523 706 aa9.51□□□□□ -0.89
USP8-216ENST00000561206 CC2D2BQ6DHV5 1058 aa9.51□□□□□ -0.89
USP8-216ENST00000561206 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
USP8-216ENST00000561206 AMPD1P23109 780 aa9.5□□□□□ -0.89
USP8-216ENST00000561206 PDE4DQ08499 809 aa9.5□□□□□ -0.89
USP8-216ENST00000561206 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
USP8-216ENST00000561206 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
USP8-216ENST00000561206 EPS8L1Q8TE68 723 aa9.5□□□□□ -0.89
USP8-216ENST00000561206 NDFIP2Q9NV92 336 aa9.5□□□□□ -0.89
USP8-216ENST00000561206 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
USP8-216ENST00000561206 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
USP8-216ENST00000561206 CYP2U1Q7Z449 544 aa9.49□□□□□ -0.89
USP8-216ENST00000561206 TRAK2O60296 914 aa9.48□□□□□ -0.89
USP8-216ENST00000561206 RSPO4Q2I0M5 234 aaPredicted RBP9.48□□□□□ -0.89
USP8-216ENST00000561206 ARTNQ5T4W7 220 aa9.48□□□□□ -0.89
USP8-216ENST00000561206 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
USP8-216ENST00000561206 GIGYF1O75420 1035 aaPredicted RBP9.47□□□□□ -0.89
USP8-216ENST00000561206 ARAFP10398 606 aa9.47□□□□□ -0.89
USP8-216ENST00000561206 BMP4P12644 408 aa9.47□□□□□ -0.89
USP8-216ENST00000561206 GATA4P43694 442 aa9.47□□□□□ -0.89
USP8-216ENST00000561206 NKAPLQ5M9Q1 402 aa9.47□□□□□ -0.89
USP8-216ENST00000561206 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
USP8-216ENST00000561206 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
USP8-216ENST00000561206 FGFR3P22607 806 aa9.45□□□□□ -0.9
USP8-216ENST00000561206 GPAMQ9HCL2 828 aa9.45□□□□□ -0.9
USP8-216ENST00000561206 HMX1Q9NP08 348 aaPredicted RBP9.44□□□□□ -0.9
USP8-216ENST00000561206 ZFP64Q9NPA5 681 aa9.44□□□□□ -0.9
USP8-216ENST00000561206 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
USP8-216ENST00000561206 SCO2A0A1W2PP80 73 aa9.43□□□□□ -0.9
USP8-216ENST00000561206 CTBSQ01459 385 aa9.43□□□□□ -0.9
USP8-216ENST00000561206 SKIV2LQ15477 1246 aaKnown RBP9.43□□□□□ -0.9
USP8-216ENST00000561206 OSBPL3Q9H4L5 887 aa9.43□□□□□ -0.9
USP8-216ENST00000561206 ARHGEF10LQ9HCE6 1279 aa9.43□□□□□ -0.9
USP8-216ENST00000561206 BNIP3LO60238 219 aa9.42□□□□□ -0.9
USP8-216ENST00000561206 SCTRP47872 440 aa9.42□□□□□ -0.9
USP8-216ENST00000561206 RNF20Q5VTR2 975 aa9.42□□□□□ -0.9
USP8-216ENST00000561206 ABHD17AQ96GS6 310 aa9.42□□□□□ -0.9
USP8-216ENST00000561206 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
USP8-216ENST00000561206 SPATA31C1P0DKV0 1188 aa9.41□□□□□ -0.9
USP8-216ENST00000561206 GNRH1P01148 92 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 CSB-PGBD3P0DP91 1061 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 CHSY3Q70JA7 882 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 PGBD3Q8N328 593 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 TRIM11Q96F44 468 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 CRISPLD1Q9H336 500 aa9.4□□□□□ -0.9
USP8-216ENST00000561206 DYRK3O43781 588 aa9.39□□□□□ -0.91
USP8-216ENST00000561206 AP1G2O75843 785 aa9.39□□□□□ -0.91
USP8-216ENST00000561206 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
USP8-216ENST00000561206 CENPCQ03188 943 aa9.39□□□□□ -0.91
USP8-216ENST00000561206 RUBCNLQ9H714 662 aa9.39□□□□□ -0.91
USP8-216ENST00000561206 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
USP8-216ENST00000561206 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 IL2RAP01589 272 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 MSX1P28360 303 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 SH3D19Q5HYK7 790 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 CNKSR1Q969H4 720 aa9.38□□□□□ -0.91
USP8-216ENST00000561206 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
USP8-216ENST00000561206 GOLGA2P5Q9HBQ8 144 aa9.37□□□□□ -0.91
USP8-216ENST00000561206 PCDHB9Q9Y5E1 797 aa9.37□□□□□ -0.91
USP8-216ENST00000561206 PHKA2P46019 1235 aa9.36□□□□□ -0.91
USP8-216ENST00000561206 MCCD1P59942 119 aaPredicted RBP9.36□□□□□ -0.91
USP8-216ENST00000561206 ZSCAN10Q96SZ4 725 aaPredicted RBP9.36□□□□□ -0.91
USP8-216ENST00000561206 TRIM34Q9BYJ4 488 aa9.36□□□□□ -0.91
USP8-216ENST00000561206 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
USP8-216ENST00000561206 ADH6P28332 368 aa9.35□□□□□ -0.91
USP8-216ENST00000561206 C4orf17Q53FE4 359 aa9.35□□□□□ -0.91
USP8-216ENST00000561206 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
USP8-216ENST00000561206 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
USP8-216ENST00000561206 XAGE2Q96GT9 111 aa9.35□□□□□ -0.91
USP8-216ENST00000561206 DNAAF2Q9NVR5 837 aaKnown RBP9.35□□□□□ -0.91
USP8-216ENST00000561206 KLF15Q9UIH9 416 aa9.35□□□□□ -0.91
USP8-216ENST00000561206 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
USP8-216ENST00000561206 FIGNL1Q6PIW4 674 aa9.34□□□□□ -0.91
USP8-216ENST00000561206 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
USP8-216ENST00000561206 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
USP8-216ENST00000561206 RAB6BQ9NRW1 208 aa9.33□□□□□ -0.92
USP8-216ENST00000561206 PCDHGC4Q9Y5F7 938 aa9.33□□□□□ -0.92
USP8-216ENST00000561206 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
USP8-216ENST00000561206 NBPF11Q86T75 865 aa9.32□□□□□ -0.92
USP8-216ENST00000561206 PRSS36Q5K4E3 855 aa9.31□□□□□ -0.92
USP8-216ENST00000561206 PCDHB11Q9Y5F2 797 aa9.31□□□□□ -0.92
USP8-216ENST00000561206 LRP8Q14114 963 aa9.3□□□□□ -0.92
USP8-216ENST00000561206 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
USP8-216ENST00000561206 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
USP8-216ENST00000561206 HCN2Q9UL51 889 aa9.3□□□□□ -0.92
USP8-216ENST00000561206 TMEM214Q6NUQ4 689 aaKnown RBP9.29□□□□□ -0.92
USP8-216ENST00000561206 RHBDD1Q8TEB9 315 aa9.29□□□□□ -0.92
USP8-216ENST00000561206 ZCCHC2Q9C0B9 1178 aaKnown RBP9.29□□□□□ -0.92
USP8-216ENST00000561206 SPDYE3A6NKU9 549 aa9.28□□□□□ -0.92
USP8-216ENST00000561206 GTF2E1P29083 439 aaPredicted RBP9.28□□□□□ -0.92
USP8-216ENST00000561206 PPARGC1BQ86YN6 1023 aaKnown RBP9.28□□□□□ -0.92
USP8-216ENST00000561206 C1orf216Q8TAB5 229 aa9.28□□□□□ -0.92
USP8-216ENST00000561206 MDFIQ99750 246 aa9.27□□□□□ -0.93
USP8-216ENST00000561206 ESF1Q9H501 851 aaKnown RBP9.27□□□□□ -0.93
USP8-216ENST00000561206 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
USP8-216ENST00000561206 H2AFB2P0C5Z0 115 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms