RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 IL27Q8NEV9 243 aa6.89□□□□□ -1.31
HERC1-211ENST00000560983 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
HERC1-211ENST00000560983 MADDQ8WXG6 1647 aa6.89□□□□□ -1.31
HERC1-211ENST00000560983 FBXO45P0C2W1 286 aa6.88□□□□□ -1.31
HERC1-211ENST00000560983 FOXD4L5Q5VV16 416 aaPredicted RBP6.88□□□□□ -1.31
HERC1-211ENST00000560983 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
HERC1-211ENST00000560983 CUL7Q14999 1698 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 SENP3-EIF4A1A0A087X0R7 540 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 FIGNL2A6NMB9 653 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 PTGIRP43119 386 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 RELBQ01201 579 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 CCDC125Q86Z20 511 aa6.87□□□□□ -1.31
HERC1-211ENST00000560983 INSM2Q96T92 566 aaPredicted RBP6.87□□□□□ -1.31
HERC1-211ENST00000560983 PHLDB1Q86UU1 1377 aa6.86□□□□□ -1.31
HERC1-211ENST00000560983 BCORL1Q5H9F3 1711 aa6.86□□□□□ -1.31
HERC1-211ENST00000560983 LTBP4Q8N2S1 1624 aa6.86□□□□□ -1.31
HERC1-211ENST00000560983 DISP1Q96F81 1524 aa6.86□□□□□ -1.31
HERC1-211ENST00000560983 UBAP1LF5GYI3 381 aa6.85□□□□□ -1.31
HERC1-211ENST00000560983 GIGYF1O75420 1035 aaPredicted RBP6.85□□□□□ -1.31
HERC1-211ENST00000560983 MTMR14Q8NCE2 650 aa6.85□□□□□ -1.31
HERC1-211ENST00000560983 PTPRTO14522 1441 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 ITGA6P23229 1130 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 HSPA1LP34931 641 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 CEBPAP49715 358 aaPredicted RBP6.84□□□□□ -1.31
HERC1-211ENST00000560983 MCCD1P59942 119 aaPredicted RBP6.84□□□□□ -1.31
HERC1-211ENST00000560983 ERVK-9P63128 1117 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 NR1H3Q13133 447 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 ZNF395Q9H8N7 513 aaPredicted RBP6.84□□□□□ -1.31
HERC1-211ENST00000560983 IQSEC2Q5JU85 1478 aa6.84□□□□□ -1.31
HERC1-211ENST00000560983 ZCCHC11Q5TAX3 1644 aaKnown RBP6.83□□□□□ -1.32
HERC1-211ENST00000560983 RNF144AP50876 292 aaPredicted RBP6.83□□□□□ -1.32
HERC1-211ENST00000560983 RAB15P59190 212 aa6.83□□□□□ -1.32
HERC1-211ENST00000560983 POLMQ9NP87 494 aaPredicted RBP6.83□□□□□ -1.32
HERC1-211ENST00000560983 SRCAPQ6ZRS2 3230 aa6.83□□□□□ -1.32
HERC1-211ENST00000560983 MLECQ14165 292 aa6.82□□□□□ -1.32
HERC1-211ENST00000560983 TRIM52Q96A61 297 aa6.82□□□□□ -1.32
HERC1-211ENST00000560983 CYLDQ9NQC7 956 aa6.82□□□□□ -1.32
HERC1-211ENST00000560983 PCDHB9Q9Y5E1 797 aa6.82□□□□□ -1.32
HERC1-211ENST00000560983 GPC1P35052 558 aa6.81□□□□□ -1.32
HERC1-211ENST00000560983 GSK3AP49840 483 aa6.81□□□□□ -1.32
HERC1-211ENST00000560983 RNFT1Q5M7Z0 435 aa6.81□□□□□ -1.32
HERC1-211ENST00000560983 COL25A1Q9BXS0 654 aaPredicted RBP6.81□□□□□ -1.32
HERC1-211ENST00000560983 CARMIL1Q5VZK9 1371 aa6.81□□□□□ -1.32
HERC1-211ENST00000560983 RIMS1Q86UR5 1692 aaKnown RBP6.81□□□□□ -1.32
HERC1-211ENST00000560983 BIVM-ERCC5R4GMW8 1640 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 STRCQ7RTU9 1775 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 TRAK2O60296 914 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 SLURP2P0DP57 97 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 RNF20Q5VTR2 975 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 CC2D2BQ6DHV5 1058 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 LYSMD3Q7Z3D4 306 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 CNTNAP3BQ96NU0 1288 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 CNTNAP3Q9BZ76 1288 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 SNRKQ9NRH2 765 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 RGS17Q9UGC6 210 aaPredicted RBP6.8□□□□□ -1.32
HERC1-211ENST00000560983 NDUFB9Q9Y6M9 179 aa6.8□□□□□ -1.32
HERC1-211ENST00000560983 MED1Q15648 1581 aaPredicted RBP6.79□□□□□ -1.32
HERC1-211ENST00000560983 ATP5J2-PTCD1G3V325 749 aa6.79□□□□□ -1.32
HERC1-211ENST00000560983 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
HERC1-211ENST00000560983 VWA5B2Q8N398 1253 aa6.79□□□□□ -1.32
HERC1-211ENST00000560983 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
HERC1-211ENST00000560983 CFAP43Q8NDM7 1665 aa6.79□□□□□ -1.32
HERC1-211ENST00000560983 POGZQ7Z3K3 1410 aa6.78□□□□□ -1.32
HERC1-211ENST00000560983 SCTRP47872 440 aa6.78□□□□□ -1.32
HERC1-211ENST00000560983 KCNMA1Q12791 1236 aa6.78□□□□□ -1.32
HERC1-211ENST00000560983 ZNF385CQ66K41 422 aaPredicted RBP6.78□□□□□ -1.32
HERC1-211ENST00000560983 OSBPL3Q9H4L5 887 aa6.78□□□□□ -1.32
HERC1-211ENST00000560983 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
HERC1-211ENST00000560983 ZNF335Q9H4Z2 1342 aaPredicted RBP6.77□□□□□ -1.32
HERC1-211ENST00000560983 A0A1W2PRU2 124 aa6.77□□□□□ -1.33
HERC1-211ENST00000560983 NEO1Q92859 1461 aa6.77□□□□□ -1.33
HERC1-211ENST00000560983 FRMPD1Q5SYB0 1578 aa6.77□□□□□ -1.33
HERC1-211ENST00000560983 APBB1O00213 710 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 ARHGEF15O94989 841 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 CLN3Q13286 438 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 GAS6Q14393 721 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 GMCL1Q96IK5 515 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 GRIP2Q9C0E4 1043 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
HERC1-211ENST00000560983 UGGT2Q9NYU1 1516 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 FHOD3Q2V2M9 1422 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 UHRF1BP1Q6BDS2 1440 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 AKNAQ7Z591 1439 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 KIF27Q86VH2 1401 aa6.76□□□□□ -1.33
HERC1-211ENST00000560983 IQGAP2Q13576 1575 aa6.75□□□□□ -1.33
HERC1-211ENST00000560983 ARID3CA6NKF2 412 aa6.75□□□□□ -1.33
HERC1-211ENST00000560983 SPATA31C2B4DYI2 1134 aa6.75□□□□□ -1.33
HERC1-211ENST00000560983 PIP4K2BP78356 416 aa6.75□□□□□ -1.33
HERC1-211ENST00000560983 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
HERC1-211ENST00000560983 FANCAO15360 1455 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 CDC14CA4D256 554 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 IRF5Q13568 498 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 TPRNQ4KMQ1 711 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 WDR44Q5JSH3 913 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 PRICKLE2Q7Z3G6 844 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 TRIM22Q8IYM9 498 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 PHTF2Q8N3S3 785 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
HERC1-211ENST00000560983 ZNF837Q96EG3 531 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms