RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 LRRN4Q8WUT4 740 aa9.2□□□□□ -0.94
USP8-210ENST00000560379 CHMP4AQ9BY43 222 aa9.2□□□□□ -0.94
USP8-210ENST00000560379 CCDC27Q2M243 656 aa9.19□□□□□ -0.94
USP8-210ENST00000560379 GPKOWQ92917 476 aaPredicted RBP eCLIP9.19□□□□□ -0.94
USP8-210ENST00000560379 AMOTL2Q9Y2J4 779 aa9.19□□□□□ -0.94
USP8-210ENST00000560379 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
USP8-210ENST00000560379 IVNS1ABPQ9Y6Y0 642 aa9.19□□□□□ -0.94
USP8-210ENST00000560379 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
USP8-210ENST00000560379 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
USP8-210ENST00000560379 CCDC155Q8N6L0 562 aa9.18□□□□□ -0.94
USP8-210ENST00000560379 NANOS1Q8WY41 292 aaKnown RBP9.18□□□□□ -0.94
USP8-210ENST00000560379 COL25A1Q9BXS0 654 aaPredicted RBP9.18□□□□□ -0.94
USP8-210ENST00000560379 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
USP8-210ENST00000560379 CLASP1Q7Z460 1538 aa9.17□□□□□ -0.94
USP8-210ENST00000560379 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
USP8-210ENST00000560379 SUZ12Q15022 739 aaKnown RBP9.17□□□□□ -0.94
USP8-210ENST00000560379 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
USP8-210ENST00000560379 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
USP8-210ENST00000560379 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
USP8-210ENST00000560379 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
USP8-210ENST00000560379 CTSOP43234 321 aaPredicted RBP9.16□□□□□ -0.94
USP8-210ENST00000560379 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
USP8-210ENST00000560379 PDXDC2PQ6P474 469 aa9.16□□□□□ -0.94
USP8-210ENST00000560379 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
USP8-210ENST00000560379 KCTD15Q96SI1 283 aaPredicted RBP9.16□□□□□ -0.94
USP8-210ENST00000560379 ADAMTS8Q9UP79 889 aa9.16□□□□□ -0.94
USP8-210ENST00000560379 SND1Q7KZF4 910 aaKnown RBP eCLIP9.15□□□□□ -0.94
USP8-210ENST00000560379 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.94
USP8-210ENST00000560379 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
USP8-210ENST00000560379 FKBPLQ9UIM3 349 aa9.15□□□□□ -0.94
USP8-210ENST00000560379 NUP160Q12769 1436 aa9.14□□□□□ -0.95
USP8-210ENST00000560379 EEA1Q15075 1411 aa9.14□□□□□ -0.95
USP8-210ENST00000560379 NR6A1Q15406 480 aa9.14□□□□□ -0.95
USP8-210ENST00000560379 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
USP8-210ENST00000560379 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
USP8-210ENST00000560379 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
USP8-210ENST00000560379 PALM3A6NDB9 673 aaPredicted RBP9.13□□□□□ -0.95
USP8-210ENST00000560379 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
USP8-210ENST00000560379 RASSF7Q02833 373 aa9.13□□□□□ -0.95
USP8-210ENST00000560379 INSM2Q96T92 566 aaPredicted RBP9.13□□□□□ -0.95
USP8-210ENST00000560379 CEP170Q5SW79 1584 aa9.12□□□□□ -0.95
USP8-210ENST00000560379 ITGA6P23229 1130 aa9.12□□□□□ -0.95
USP8-210ENST00000560379 VAC14Q08AM6 782 aa9.12□□□□□ -0.95
USP8-210ENST00000560379 KDF1Q8NAX2 398 aaPredicted RBP9.12□□□□□ -0.95
USP8-210ENST00000560379 RNF217Q8TC41 542 aa9.12□□□□□ -0.95
USP8-210ENST00000560379 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
USP8-210ENST00000560379 ARHGEF15O94989 841 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 SLURP2P0DP57 97 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 RELBQ01201 579 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 IGF1RP08069 1367 aa9.11□□□□□ -0.95
USP8-210ENST00000560379 TMEM88BA6NKF7 163 aa9.1□□□□□ -0.95
USP8-210ENST00000560379 GPR37L1O60883 481 aa9.1□□□□□ -0.95
USP8-210ENST00000560379 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
USP8-210ENST00000560379 TMEM151AQ8N4L1 468 aa9.1□□□□□ -0.95
USP8-210ENST00000560379 ALG2Q9H553 416 aa9.1□□□□□ -0.95
USP8-210ENST00000560379 HMX1Q9NP08 348 aaPredicted RBP9.1□□□□□ -0.95
USP8-210ENST00000560379 GDF11O95390 407 aa9.09□□□□□ -0.95
USP8-210ENST00000560379 ADAM32Q8TC27 787 aa9.09□□□□□ -0.95
USP8-210ENST00000560379 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
USP8-210ENST00000560379 TFIP11Q9UBB9 837 aaKnown RBP9.09□□□□□ -0.95
USP8-210ENST00000560379 ZC3H4Q9UPT8 1303 aaKnown RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 CTTNBP2Q8WZ74 1663 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 LILRA1O75019 489 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 ATG7O95352 703 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 ZBTB33Q86T24 672 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 TRIM34Q9BYJ4 488 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 ZNF395Q9H8N7 513 aaPredicted RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 CUEDC1Q9NWM3 386 aaPredicted RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 CDV3Q9UKY7 258 aaKnown RBP9.08□□□□□ -0.96
USP8-210ENST00000560379 ARHGEF11O15085 1522 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 RIMBP3CA6NJZ7 1639 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 RIMBP3BA6NNM3 1639 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 RIMBP3Q9UFD9 1639 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 RAPGEF2Q9Y4G8 1499 aa9.08□□□□□ -0.96
USP8-210ENST00000560379 DHX9Q08211 1270 aaKnown RBP9.07□□□□□ -0.96
USP8-210ENST00000560379 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
USP8-210ENST00000560379 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
USP8-210ENST00000560379 CARMIL1Q5VZK9 1371 aa9.07□□□□□ -0.96
USP8-210ENST00000560379 PRXQ9BXM0 1461 aa9.07□□□□□ -0.96
USP8-210ENST00000560379 KIF21BO75037 1637 aa9.06□□□□□ -0.96
USP8-210ENST00000560379 CDC14CA4D256 554 aa9.06□□□□□ -0.96
USP8-210ENST00000560379 POLMQ9NP87 494 aaPredicted RBP9.06□□□□□ -0.96
USP8-210ENST00000560379 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
USP8-210ENST00000560379 GAS6Q14393 721 aa9.05□□□□□ -0.96
USP8-210ENST00000560379 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
USP8-210ENST00000560379 ADH1AP07327 375 aa9.04□□□□□ -0.96
USP8-210ENST00000560379 PTK2Q05397 1052 aa9.04□□□□□ -0.96
USP8-210ENST00000560379 SV2AQ7L0J3 742 aa9.04□□□□□ -0.96
USP8-210ENST00000560379 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
USP8-210ENST00000560379 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
USP8-210ENST00000560379 UNCXA6NJT0 531 aa9.03□□□□□ -0.96
USP8-210ENST00000560379 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
USP8-210ENST00000560379 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
USP8-210ENST00000560379 MAFBQ9Y5Q3 323 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms