RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 TIMMDC1Q9NPL8 285 aa8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 ZNF777Q9ULD5 760 aaPredicted RBP8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 PCDHGA11Q9Y5H2 935 aa8.75□□□□□ -1.01
CTDSPL2-207ENST00000559738 ATP9BO43861 1147 aa8.74□□□□□ -1.01
CTDSPL2-207ENST00000559738 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
CTDSPL2-207ENST00000559738 ZSCAN10Q96SZ4 725 aaPredicted RBP8.74□□□□□ -1.01
CTDSPL2-207ENST00000559738 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
CTDSPL2-207ENST00000559738 USP17L3A6NCW0 530 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 USP17L4A6NCW7 530 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 LZTS3O60299 673 aaPredicted RBP8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 DBN1Q16643 649 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 WDR44Q5JSH3 913 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 USP17L2Q6R6M4 530 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 USP17L1Q7RTZ2 530 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 CALR3Q96L12 384 aaKnown RBP8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
CTDSPL2-207ENST00000559738 GPR25O00155 361 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 INHAP05111 366 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 PHKA2P46019 1235 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 GDF10P55107 478 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 TMEM214Q6NUQ4 689 aaKnown RBP8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 ZMYND15Q9H091 742 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
CTDSPL2-207ENST00000559738 TMEM229AB2RXF0 380 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 H7C1W4 665 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 GTF2IP78347 998 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 GAS6Q14393 721 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 TLR1Q15399 786 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 GNASQ5JWF2 1037 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 GMCL1Q96IK5 515 aa8.71□□□□□ -1.02
CTDSPL2-207ENST00000559738 PALM3A6NDB9 673 aaPredicted RBP8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 SLURP2P0DP57 97 aa8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 ZNF385CQ66K41 422 aaPredicted RBP8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 GTPBP3Q969Y2 492 aaKnown RBP8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 PPP1R12CQ9BZL4 782 aa8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 GPAMQ9HCL2 828 aa8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 MAFBQ9Y5Q3 323 aaPredicted RBP8.7□□□□□ -1.02
CTDSPL2-207ENST00000559738 ADAMTS2O95450 1211 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 F11P03951 625 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 CLDN10P78369 228 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 C4orf17Q53FE4 359 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 KIAA1024Q9UPX6 916 aa8.69□□□□□ -1.02
CTDSPL2-207ENST00000559738 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
CTDSPL2-207ENST00000559738 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-207ENST00000559738 SERTAD1Q9UHV2 236 aa8.68□□□□□ -1.02
CTDSPL2-207ENST00000559738 A0A1B0GTH6 734 aa8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 SRSF11Q05519 484 aaKnown RBP8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 RHBDD1Q8TEB9 315 aa8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 TRERF1Q96PN7 1200 aa8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 SLC4A9Q96Q91 983 aa8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 MKRN1Q9UHC7 482 aaKnown RBP8.67□□□□□ -1.02
CTDSPL2-207ENST00000559738 SMTNP53814 917 aa8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 PSME1Q06323 249 aa8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 TRIM50Q86XT4 487 aa8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
CTDSPL2-207ENST00000559738 THBS1P07996 1170 aa8.65□□□□□ -1.02
CTDSPL2-207ENST00000559738 PLA2G4AP47712 749 aa8.65□□□□□ -1.02
CTDSPL2-207ENST00000559738 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
CTDSPL2-207ENST00000559738 ZNF358Q9NW07 568 aa8.65□□□□□ -1.02
CTDSPL2-207ENST00000559738 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
CTDSPL2-207ENST00000559738 DKK1O94907 266 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 MSX1P28360 303 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 MTFR1Q15390 333 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 KANK4Q5T7N3 995 aaPredicted RBP8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 DNAAF2Q9NVR5 837 aaKnown RBP8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 ADAMTS8Q9UP79 889 aa8.64□□□□□ -1.03
CTDSPL2-207ENST00000559738 IGF1RP08069 1367 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 A6NJY4 79 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 CSB-PGBD3P0DP91 1061 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 LMOD1P29536 600 aaPredicted RBP8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 ATP1A2P50993 1020 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 CCDC102BQ68D86 513 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 LYPD4Q6UWN0 246 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 PGBD3Q8N328 593 aa8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 IQSEC3Q9UPP2 1182 aaPredicted RBP8.63□□□□□ -1.03
CTDSPL2-207ENST00000559738 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
CTDSPL2-207ENST00000559738 ZNF594Q96JF6 807 aaPredicted RBP8.62□□□□□ -1.03
CTDSPL2-207ENST00000559738 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 CDK2AP1O14519 115 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 MX2P20592 715 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 RASA1P20936 1047 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 EPHA4P54764 986 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 MAP3K10Q02779 954 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 SIX5Q8N196 739 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 NIFKQ9BYG3 293 aaKnown RBP8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
CTDSPL2-207ENST00000559738 BACH1O14867 736 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms