RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 GPR37L1O60883 481 aa7.16□□□□□ -1.26
CASC4-210ENST00000559550 ZMYM1Q5SVZ6 1142 aa7.16□□□□□ -1.26
CASC4-210ENST00000559550 GRIP2Q9C0E4 1043 aa7.16□□□□□ -1.26
CASC4-210ENST00000559550 NUCKS1Q9H1E3 243 aaKnown RBP7.16□□□□□ -1.26
CASC4-210ENST00000559550 SEMA6BQ9H3T3 888 aa7.16□□□□□ -1.26
CASC4-210ENST00000559550 ATP5J2-PTCD1G3V325 749 aa7.15□□□□□ -1.26
CASC4-210ENST00000559550 UBAP2LQ14157 1087 aaKnown RBP7.15□□□□□ -1.26
CASC4-210ENST00000559550 FOXD4L6Q3SYB3 417 aaPredicted RBP7.15□□□□□ -1.26
CASC4-210ENST00000559550 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
CASC4-210ENST00000559550 FOXD4L3Q6VB84 417 aaPredicted RBP7.15□□□□□ -1.26
CASC4-210ENST00000559550 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
CASC4-210ENST00000559550 GDF2Q9UK05 429 aaPredicted RBP7.15□□□□□ -1.26
CASC4-210ENST00000559550 A0A1W2PRU2 124 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 SPATA31C2B4DYI2 1134 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 SOCS7O14512 581 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 WDR44Q5JSH3 913 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 RRAGCQ9HB90 399 aa7.14□□□□□ -1.27
CASC4-210ENST00000559550 F11P03951 625 aa7.13□□□□□ -1.27
CASC4-210ENST00000559550 DOC2BQ14184 412 aa7.13□□□□□ -1.27
CASC4-210ENST00000559550 SEPT12Q8IYM1 358 aa7.13□□□□□ -1.27
CASC4-210ENST00000559550 TBC1D2BQ9UPU7 963 aa7.13□□□□□ -1.27
CASC4-210ENST00000559550 MEN1O00255 615 aa7.12□□□□□ -1.27
CASC4-210ENST00000559550 KRTAP4-2Q9BYR5 136 aa7.12□□□□□ -1.27
CASC4-210ENST00000559550 C2CD2LO14523 706 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 GNB5O14775 395 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 DZIP3Q86Y13 1208 aaKnown RBP7.11□□□□□ -1.27
CASC4-210ENST00000559550 GOLGA6L1Q8N7Z2 621 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 POM121Q96HA1 1249 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 GTF3C3Q9Y5Q9 886 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 NDUFB9Q9Y6M9 179 aa7.11□□□□□ -1.27
CASC4-210ENST00000559550 DGKGP49619 791 aa7.1□□□□□ -1.27
CASC4-210ENST00000559550 FLIIQ13045 1269 aa7.1□□□□□ -1.27
CASC4-210ENST00000559550 GDPD2Q9HCC8 539 aa7.1□□□□□ -1.27
CASC4-210ENST00000559550 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
CASC4-210ENST00000559550 IRF5Q13568 498 aa7.09□□□□□ -1.27
CASC4-210ENST00000559550 SLC27A3Q5K4L6 730 aa7.09□□□□□ -1.27
CASC4-210ENST00000559550 SLCO4C1Q6ZQN7 724 aa7.09□□□□□ -1.27
CASC4-210ENST00000559550 BTBD6Q96KE9 485 aa7.09□□□□□ -1.27
CASC4-210ENST00000559550 COG6Q9Y2V7 657 aa7.09□□□□□ -1.27
CASC4-210ENST00000559550 APBB1O00213 710 aa7.08□□□□□ -1.28
CASC4-210ENST00000559550 WASLO00401 505 aaPredicted RBP7.08□□□□□ -1.28
CASC4-210ENST00000559550 ERVK-9P63128 1117 aa7.08□□□□□ -1.28
CASC4-210ENST00000559550 CLN3Q13286 438 aa7.08□□□□□ -1.28
CASC4-210ENST00000559550 RSPO4Q2I0M5 234 aaPredicted RBP7.08□□□□□ -1.28
CASC4-210ENST00000559550 FBXO45P0C2W1 286 aa7.07□□□□□ -1.28
CASC4-210ENST00000559550 UBTFP17480 764 aaKnown RBP7.07□□□□□ -1.28
CASC4-210ENST00000559550 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
CASC4-210ENST00000559550 GGA1Q9UJY5 639 aa7.07□□□□□ -1.28
CASC4-210ENST00000559550 PIK3R2O00459 728 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 EPXP11678 715 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 ABL2P42684 1182 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 NKAPLQ5M9Q1 402 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 PNMA1Q8ND90 353 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 CLUAP1Q96AJ1 413 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 NDFIP2Q9NV92 336 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 PHF24Q9UPV7 400 aa7.06□□□□□ -1.28
CASC4-210ENST00000559550 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
CASC4-210ENST00000559550 AMPD1P23109 780 aa7.05□□□□□ -1.28
CASC4-210ENST00000559550 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
CASC4-210ENST00000559550 TRIM52Q96A61 297 aa7.05□□□□□ -1.28
CASC4-210ENST00000559550 NLRP3Q96P20 1036 aa7.05□□□□□ -1.28
CASC4-210ENST00000559550 GPAMQ9HCL2 828 aa7.05□□□□□ -1.28
CASC4-210ENST00000559550 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
CASC4-210ENST00000559550 ZBBXA8MT70 800 aa7.04□□□□□ -1.28
CASC4-210ENST00000559550 GATA4P43694 442 aa7.04□□□□□ -1.28
CASC4-210ENST00000559550 CTBSQ01459 385 aa7.04□□□□□ -1.28
CASC4-210ENST00000559550 LBRQ14739 615 aaKnown RBP7.04□□□□□ -1.28
CASC4-210ENST00000559550 ARTNQ5T4W7 220 aa7.04□□□□□ -1.28
CASC4-210ENST00000559550 GOLGA2P5Q9HBQ8 144 aa7.04□□□□□ -1.28
CASC4-210ENST00000559550 BMP4P12644 408 aa7.03□□□□□ -1.28
CASC4-210ENST00000559550 NR1H3Q13133 447 aa7.03□□□□□ -1.28
CASC4-210ENST00000559550 PRM3Q9NNZ6 103 aa7.03□□□□□ -1.28
CASC4-210ENST00000559550 ATXN7L1Q9ULK2 861 aaPredicted RBP7.03□□□□□ -1.28
CASC4-210ENST00000559550 RAD21O60216 631 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 TRAK2O60296 914 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 SCTRP47872 440 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 VAC14Q08AM6 782 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 RNF135Q8IUD6 432 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 ZFP64Q9NPA5 681 aa7.02□□□□□ -1.29
CASC4-210ENST00000559550 A0A1B0GTH6 734 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 SCO2A0A1W2PP80 73 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 BNIP3LO60238 219 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 ARAFP10398 606 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 FGFR3P22607 806 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 ABHD17AQ96GS6 310 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 OSBPL3Q9H4L5 887 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 ARHGEF10LQ9HCE6 1279 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 HRH3Q9Y5N1 445 aa7.01□□□□□ -1.29
CASC4-210ENST00000559550 CYP2U1Q7Z449 544 aa7□□□□□ -1.29
CASC4-210ENST00000559550 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
CASC4-210ENST00000559550 PHKA2P46019 1235 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 CHSY3Q70JA7 882 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 CCDC125Q86Z20 511 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 FNBP4Q8N3X1 1017 aaPredicted RBP6.99□□□□□ -1.29
CASC4-210ENST00000559550 RUBCNLQ9H714 662 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 KLF15Q9UIH9 416 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms