RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 AEBP1Q8IUX7 1158 aa20.38■□□□□ 0.85
LRRC28-213ENST00000559399 ATP6V1AP38606 617 aa20.37■□□□□ 0.85
LRRC28-213ENST00000559399 GNPATO15228 680 aa20.36■□□□□ 0.85
LRRC28-213ENST00000559399 KDRP35968 1356 aa20.35■□□□□ 0.85
LRRC28-213ENST00000559399 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
LRRC28-213ENST00000559399 SMIM5Q71RC9 77 aa20.35■□□□□ 0.85
LRRC28-213ENST00000559399 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
LRRC28-213ENST00000559399 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
LRRC28-213ENST00000559399 IL13P35225 146 aa20.34■□□□□ 0.85
LRRC28-213ENST00000559399 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
LRRC28-213ENST00000559399 ITGB4P16144 1822 aa20.34■□□□□ 0.85
LRRC28-213ENST00000559399 MTHFSP49914 203 aa20.33■□□□□ 0.85
LRRC28-213ENST00000559399 CABP4P57796 275 aa20.33■□□□□ 0.85
LRRC28-213ENST00000559399 GRIN3BO60391 1043 aa20.31■□□□□ 0.84
LRRC28-213ENST00000559399 YBX3P16989 372 aaKnown RBP eCLIP20.31■□□□□ 0.84
LRRC28-213ENST00000559399 TAF1LQ8IZX4 1826 aa20.31■□□□□ 0.84
LRRC28-213ENST00000559399 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
LRRC28-213ENST00000559399 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
LRRC28-213ENST00000559399 RTCBQ9Y3I0 505 aaKnown RBP20.29■□□□□ 0.84
LRRC28-213ENST00000559399 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
LRRC28-213ENST00000559399 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.84
LRRC28-213ENST00000559399 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
LRRC28-213ENST00000559399 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.84
LRRC28-213ENST00000559399 ADRA2BP18089 450 aa20.26■□□□□ 0.83
LRRC28-213ENST00000559399 TRAPPC3LQ5T215 181 aa20.26■□□□□ 0.83
LRRC28-213ENST00000559399 RC3H1Q5TC82 1133 aaKnown RBP20.26■□□□□ 0.83
LRRC28-213ENST00000559399 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
LRRC28-213ENST00000559399 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
LRRC28-213ENST00000559399 PTCD1O75127 700 aaKnown RBP20.24■□□□□ 0.83
LRRC28-213ENST00000559399 MMP10P09238 476 aa20.24■□□□□ 0.83
LRRC28-213ENST00000559399 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
LRRC28-213ENST00000559399 HMOX1P09601 288 aa20.23■□□□□ 0.83
LRRC28-213ENST00000559399 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
LRRC28-213ENST00000559399 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
LRRC28-213ENST00000559399 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
LRRC28-213ENST00000559399 NLGN1Q8N2Q7 840 aa20.22■□□□□ 0.83
LRRC28-213ENST00000559399 ARHGEF1Q92888 912 aaKnown RBP20.22■□□□□ 0.83
LRRC28-213ENST00000559399 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
LRRC28-213ENST00000559399 RFC4P35249 363 aa20.21■□□□□ 0.83
LRRC28-213ENST00000559399 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
LRRC28-213ENST00000559399 CRKLP46109 303 aaKnown RBP20.19■□□□□ 0.82
LRRC28-213ENST00000559399 GYS1P13807 737 aa20.18■□□□□ 0.82
LRRC28-213ENST00000559399 C1QTNF8P60827 252 aa20.18■□□□□ 0.82
LRRC28-213ENST00000559399 WWC3Q9ULE0 1092 aa20.18■□□□□ 0.82
LRRC28-213ENST00000559399 CHD4Q14839 1912 aa20.17■□□□□ 0.82
LRRC28-213ENST00000559399 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
LRRC28-213ENST00000559399 GIGYF1O75420 1035 aaPredicted RBP20.17■□□□□ 0.82
LRRC28-213ENST00000559399 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
LRRC28-213ENST00000559399 MTHFSDQ2M296 383 aaKnown RBP20.17■□□□□ 0.82
LRRC28-213ENST00000559399 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
LRRC28-213ENST00000559399 MRC1P22897 1456 aa20.17■□□□□ 0.82
LRRC28-213ENST00000559399 CCDC87Q9NVE4 849 aa20.15■□□□□ 0.82
LRRC28-213ENST00000559399 C10orf71Q711Q0 1435 aa20.15■□□□□ 0.82
LRRC28-213ENST00000559399 PXDNLA1KZ92 1463 aa20.15■□□□□ 0.82
LRRC28-213ENST00000559399 COL3A1P02461 1466 aaPredicted RBP20.15■□□□□ 0.82
LRRC28-213ENST00000559399 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
LRRC28-213ENST00000559399 COL5A3P25940 1745 aaPredicted RBP20.15■□□□□ 0.82
LRRC28-213ENST00000559399 ATP10DQ9P241 1426 aa20.14■□□□□ 0.81
LRRC28-213ENST00000559399 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
LRRC28-213ENST00000559399 TGFB2P61812 414 aa20.14■□□□□ 0.81
LRRC28-213ENST00000559399 PARP3Q9Y6F1 533 aa20.14■□□□□ 0.81
LRRC28-213ENST00000559399 USP42Q9H9J4 1324 aaKnown RBP20.13■□□□□ 0.81
LRRC28-213ENST00000559399 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
LRRC28-213ENST00000559399 DNAJC10Q8IXB1 793 aa20.13■□□□□ 0.81
LRRC28-213ENST00000559399 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
LRRC28-213ENST00000559399 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
LRRC28-213ENST00000559399 ADCY9O60503 1353 aa20.11■□□□□ 0.81
LRRC28-213ENST00000559399 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
LRRC28-213ENST00000559399 FKBP8Q14318 412 aa20.1■□□□□ 0.81
LRRC28-213ENST00000559399 GAS2L2Q8NHY3 880 aa20.1■□□□□ 0.81
LRRC28-213ENST00000559399 TJP1Q07157 1748 aa20.1■□□□□ 0.81
LRRC28-213ENST00000559399 SOS1Q07889 1333 aaPredicted RBP20.09■□□□□ 0.81
LRRC28-213ENST00000559399 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
LRRC28-213ENST00000559399 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
LRRC28-213ENST00000559399 CYP19A1P11511 503 aaPredicted RBP20.09■□□□□ 0.81
LRRC28-213ENST00000559399 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.81
LRRC28-213ENST00000559399 C4AP0C0L4 1744 aa20.08■□□□□ 0.81
LRRC28-213ENST00000559399 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
LRRC28-213ENST00000559399 CFAP53Q96M91 514 aa20.08■□□□□ 0.81
LRRC28-213ENST00000559399 GPBP1L1Q9HC44 474 aaPredicted RBP20.08■□□□□ 0.81
LRRC28-213ENST00000559399 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
LRRC28-213ENST00000559399 ZPR1O75312 459 aa20.07■□□□□ 0.8
LRRC28-213ENST00000559399 DPEP1P16444 411 aa20.07■□□□□ 0.8
LRRC28-213ENST00000559399 DDR1Q08345 913 aa20.07■□□□□ 0.8
LRRC28-213ENST00000559399 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
LRRC28-213ENST00000559399 ADAMTS7Q9UKP4 1686 aa20.07■□□□□ 0.8
LRRC28-213ENST00000559399 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
LRRC28-213ENST00000559399 TEFQ10587 303 aa20.05■□□□□ 0.8
LRRC28-213ENST00000559399 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
LRRC28-213ENST00000559399 ZNF526Q8TF50 670 aaPredicted RBP20.05■□□□□ 0.8
LRRC28-213ENST00000559399 ZBTB1Q9Y2K1 713 aa20.05■□□□□ 0.8
LRRC28-213ENST00000559399 COL15A1P39059 1388 aa20.05■□□□□ 0.8
LRRC28-213ENST00000559399 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
LRRC28-213ENST00000559399 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
LRRC28-213ENST00000559399 FCHSD2O94868 740 aa20.03■□□□□ 0.8
LRRC28-213ENST00000559399 PRKAR2BP31323 418 aa20.03■□□□□ 0.8
LRRC28-213ENST00000559399 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
LRRC28-213ENST00000559399 NARFQ9UHQ1 456 aa20.03■□□□□ 0.8
LRRC28-213ENST00000559399 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
LRRC28-213ENST00000559399 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms