RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TGFB2P61812 414 aa9.6□□□□□ -0.87
LRRC28-207ENST00000558500 ARHGAP27Q6ZUM4 889 aa9.6□□□□□ -0.87
LRRC28-207ENST00000558500 C16orf71Q8IYS4 520 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-207ENST00000558500 C5P01031 1676 aa9.6□□□□□ -0.87
LRRC28-207ENST00000558500 A0A0G2JLW4 131 aa9.59□□□□□ -0.87
LRRC28-207ENST00000558500 CYP27B1O15528 508 aa9.59□□□□□ -0.87
LRRC28-207ENST00000558500 MMP10P09238 476 aa9.59□□□□□ -0.87
LRRC28-207ENST00000558500 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
LRRC28-207ENST00000558500 RTL1A6NKG5 1358 aa9.59□□□□□ -0.87
LRRC28-207ENST00000558500 C9orf131Q5VYM1 1079 aa9.58□□□□□ -0.88
LRRC28-207ENST00000558500 PIGBQ92521 554 aa9.58□□□□□ -0.88
LRRC28-207ENST00000558500 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
LRRC28-207ENST00000558500 C4BP0C0L5 1744 aa9.58□□□□□ -0.88
LRRC28-207ENST00000558500 C10orf71Q711Q0 1435 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 WDR90Q96KV7 1748 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 LOC102724428A0A0B4J2F2 783 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 GNPATO15228 680 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 FCHSD2O94868 740 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 DPEP1P16444 411 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 SIK1P57059 783 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 RRS1Q15050 365 aaKnown RBP9.57□□□□□ -0.88
LRRC28-207ENST00000558500 PLEKHG2Q9H7P9 1386 aa9.57□□□□□ -0.88
LRRC28-207ENST00000558500 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
LRRC28-207ENST00000558500 ITPK1Q13572 414 aa9.56□□□□□ -0.88
LRRC28-207ENST00000558500 NLGN1Q8N2Q7 840 aa9.56□□□□□ -0.88
LRRC28-207ENST00000558500 SSUH2Q9Y2M2 353 aa9.56□□□□□ -0.88
LRRC28-207ENST00000558500 KDM2BQ8NHM5 1336 aa9.56□□□□□ -0.88
LRRC28-207ENST00000558500 TMF1P82094 1093 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 NKX1-1Q15270 411 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-207ENST00000558500 SMC1BQ8NDV3 1235 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 SIN3AQ96ST3 1273 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 RRAGCQ9HB90 399 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
LRRC28-207ENST00000558500 INSRP06213 1382 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 HSPA1AP0DMV8 641 aaKnown RBP9.54□□□□□ -0.88
LRRC28-207ENST00000558500 HSPA1BP0DMV9 641 aaKnown RBP9.54□□□□□ -0.88
LRRC28-207ENST00000558500 KCNA3P22001 575 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 ATP6V1AP38606 617 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 TRAPPC3LQ5T215 181 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 KCPQ6ZWJ8 1503 aa9.54□□□□□ -0.88
LRRC28-207ENST00000558500 DCAF5Q96JK2 942 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 TMOD3Q9NYL9 352 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 RNF181Q9P0P0 153 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 ASAP1Q9ULH1 1129 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 RTCBQ9Y3I0 505 aaKnown RBP9.53□□□□□ -0.88
LRRC28-207ENST00000558500 TAF1LQ8IZX4 1826 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 UBR3Q6ZT12 1888 aa9.53□□□□□ -0.88
LRRC28-207ENST00000558500 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 FYB1O15117 783 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 GYS1P13807 737 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
LRRC28-207ENST00000558500 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 KIAA1551Q9HCM1 1747 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 PIM2Q9P1W9 311 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
LRRC28-207ENST00000558500 FLT4P35916 1363 aa9.51□□□□□ -0.89
LRRC28-207ENST00000558500 SLC34A2O95436 690 aa9.51□□□□□ -0.89
LRRC28-207ENST00000558500 DALRD3Q5D0E6 543 aaKnown RBP9.51□□□□□ -0.89
LRRC28-207ENST00000558500 ATG3Q9NT62 314 aa9.51□□□□□ -0.89
LRRC28-207ENST00000558500 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
LRRC28-207ENST00000558500 KIF24Q5T7B8 1368 aa9.5□□□□□ -0.89
LRRC28-207ENST00000558500 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
LRRC28-207ENST00000558500 RC3H1Q5TC82 1133 aaKnown RBP9.5□□□□□ -0.89
LRRC28-207ENST00000558500 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-207ENST00000558500 KDRP35968 1356 aa9.5□□□□□ -0.89
LRRC28-207ENST00000558500 PCNTO95613 3336 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 KIF13BQ9NQT8 1826 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 RPS6KA4O75676 772 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 RFC4P35249 363 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 SLC4A9Q96Q91 983 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 TESK2Q96S53 571 aa9.49□□□□□ -0.89
LRRC28-207ENST00000558500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.49□□□□□ -0.891e-7■■■□□ 18.9
LRRC28-207ENST00000558500 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
LRRC28-207ENST00000558500 MAP2P11137 1827 aaKnown RBP9.49□□□□□ -0.89
LRRC28-207ENST00000558500 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
LRRC28-207ENST00000558500 VEGFAP15692 232 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-207ENST00000558500 PHKG2P15735 406 aa9.48□□□□□ -0.89
LRRC28-207ENST00000558500 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
LRRC28-207ENST00000558500 CNTNAP4Q9C0A0 1308 aa9.48□□□□□ -0.89
LRRC28-207ENST00000558500 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-207ENST00000558500 CHRNA5P30532 468 aa9.47□□□□□ -0.89
LRRC28-207ENST00000558500 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
LRRC28-207ENST00000558500 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
LRRC28-207ENST00000558500 C4AP0C0L4 1744 aa9.47□□□□□ -0.89
LRRC28-207ENST00000558500 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
LRRC28-207ENST00000558500 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
LRRC28-207ENST00000558500 GLTPD2A6NH11 291 aa9.46□□□□□ -0.9
LRRC28-207ENST00000558500 RASSF7Q02833 373 aa9.46□□□□□ -0.9
LRRC28-207ENST00000558500 DDR1Q08345 913 aa9.46□□□□□ -0.9
LRRC28-207ENST00000558500 KDM6AO15550 1401 aaPredicted RBP9.46□□□□□ -0.9
LRRC28-207ENST00000558500 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
LRRC28-207ENST00000558500 LMNB1P20700 586 aa9.45□□□□□ -0.9
LRRC28-207ENST00000558500 EYA1Q99502 592 aa9.45□□□□□ -0.9
LRRC28-207ENST00000558500 SRP68Q9UHB9 627 aaKnown RBP9.45□□□□□ -0.9
LRRC28-207ENST00000558500 TNRC6CQ9HCJ0 1690 aaKnown RBP9.45□□□□□ -0.9
LRRC28-207ENST00000558500 ITGB4P16144 1822 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms