RNA–Protein interactions for RNA: ENST00000557640.1

RD3L-201, Transcript of retinal degeneration 3 like, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RD3L, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3L-201ENST00000557640 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
RD3L-201ENST00000557640 TRIM37O94972 964 aa11.81□□□□□ -0.52
RD3L-201ENST00000557640 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
RD3L-201ENST00000557640 COL18A1P39060 1754 aa11.81□□□□□ -0.52
RD3L-201ENST00000557640 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
RD3L-201ENST00000557640 RGPD5Q99666 1765 aa11.8□□□□□ -0.52
RD3L-201ENST00000557640 LAPTM4AQ15012 233 aa11.8□□□□□ -0.52
RD3L-201ENST00000557640 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
RD3L-201ENST00000557640 POGKQ9P215 609 aa11.8□□□□□ -0.52
RD3L-201ENST00000557640 PIK3C2AO00443 1686 aa11.79□□□□□ -0.52
RD3L-201ENST00000557640 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
RD3L-201ENST00000557640 KIAA1210Q9ULL0 1709 aa11.79□□□□□ -0.52
RD3L-201ENST00000557640 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
RD3L-201ENST00000557640 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
RD3L-201ENST00000557640 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
RD3L-201ENST00000557640 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
RD3L-201ENST00000557640 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
RD3L-201ENST00000557640 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
RD3L-201ENST00000557640 POLR3AO14802 1390 aaPredicted RBP11.78□□□□□ -0.52
RD3L-201ENST00000557640 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
RD3L-201ENST00000557640 GFRA3O60609 400 aa11.77□□□□□ -0.53
RD3L-201ENST00000557640 STRN4Q9NRL3 753 aa11.77□□□□□ -0.53
RD3L-201ENST00000557640 SEPT9Q9UHD8 586 aaPredicted RBP11.77□□□□□ -0.53
RD3L-201ENST00000557640 PARD3Q8TEW0 1356 aa11.77□□□□□ -0.53
RD3L-201ENST00000557640 ZC3H6P61129 1189 aaKnown RBP11.76□□□□□ -0.53
RD3L-201ENST00000557640 TRAF7Q6Q0C0 670 aa11.76□□□□□ -0.53
RD3L-201ENST00000557640 USP19O94966 1318 aa11.76□□□□□ -0.53
RD3L-201ENST00000557640 SLIT3O75094 1523 aa11.76□□□□□ -0.53
RD3L-201ENST00000557640 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
RD3L-201ENST00000557640 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
RD3L-201ENST00000557640 PHF14O94880 888 aa11.74□□□□□ -0.53
RD3L-201ENST00000557640 APBA3O96018 575 aa11.74□□□□□ -0.53
RD3L-201ENST00000557640 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
RD3L-201ENST00000557640 EMILIN3Q9NT22 766 aa11.74□□□□□ -0.53
RD3L-201ENST00000557640 CPDO75976 1380 aa11.74□□□□□ -0.53
RD3L-201ENST00000557640 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
RD3L-201ENST00000557640 PTF1AQ7RTS3 328 aa11.73□□□□□ -0.53
RD3L-201ENST00000557640 NUDT16Q96DE0 195 aaKnown RBP11.73□□□□□ -0.53
RD3L-201ENST00000557640 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
RD3L-201ENST00000557640 PAPPAQ13219 1627 aa11.72□□□□□ -0.53
RD3L-201ENST00000557640 ACEP12821 1306 aa11.72□□□□□ -0.53
RD3L-201ENST00000557640 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
RD3L-201ENST00000557640 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
RD3L-201ENST00000557640 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
RD3L-201ENST00000557640 KDM2AQ9Y2K7 1162 aa11.72□□□□□ -0.53
RD3L-201ENST00000557640 YY1P25490 414 aa11.71□□□□□ -0.53
RD3L-201ENST00000557640 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
RD3L-201ENST00000557640 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
RD3L-201ENST00000557640 OVOS2A0A0G2JMS6 1433 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 OVOS2A0A0J9YW53 1432 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 OVOS2Q6IE36 1432 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 DCAF11Q8TEB1 546 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
RD3L-201ENST00000557640 CRB1P82279 1406 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 CHD4Q14839 1912 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 LCE2BO14633 110 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 MFSD10Q14728 455 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 CDK19Q9BWU1 502 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 PPIP5K1Q6PFW1 1433 aa11.69□□□□□ -0.54
RD3L-201ENST00000557640 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
RD3L-201ENST00000557640 TCP11L2Q8N4U5 519 aa11.68□□□□□ -0.54
RD3L-201ENST00000557640 NFAT5O94916 1531 aa11.68□□□□□ -0.54
RD3L-201ENST00000557640 TRPM1Q7Z4N2 1603 aa11.68□□□□□ -0.54
RD3L-201ENST00000557640 BTAF1O14981 1849 aa11.67□□□□□ -0.54
RD3L-201ENST00000557640 MON2Q7Z3U7 1717 aa11.67□□□□□ -0.54
RD3L-201ENST00000557640 TRIM6-TRIM34B2RNG4 842 aa11.67□□□□□ -0.54
RD3L-201ENST00000557640 GOLGB1Q14789 3259 aaKnown RBP11.67□□□□□ -0.54
RD3L-201ENST00000557640 USP6P35125 1406 aa11.67□□□□□ -0.54
RD3L-201ENST00000557640 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
RD3L-201ENST00000557640 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
RD3L-201ENST00000557640 PDE3BQ13370 1112 aa11.66□□□□□ -0.54
RD3L-201ENST00000557640 EPAS1Q99814 870 aa11.66□□□□□ -0.54
RD3L-201ENST00000557640 CPSF1Q10570 1443 aaKnown RBP11.66□□□□□ -0.54
RD3L-201ENST00000557640 LTN1O94822 1766 aa11.66□□□□□ -0.54
RD3L-201ENST00000557640 KCNQ2O43526 872 aa11.65□□□□□ -0.54
RD3L-201ENST00000557640 SPON1Q9HCB6 807 aa11.65□□□□□ -0.54
RD3L-201ENST00000557640 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
RD3L-201ENST00000557640 GCP02774 474 aa11.64□□□□□ -0.55
RD3L-201ENST00000557640 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
RD3L-201ENST00000557640 PRKD2Q9BZL6 878 aa11.64□□□□□ -0.55
RD3L-201ENST00000557640 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
RD3L-201ENST00000557640 EVA1CP58658 441 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 PPP4CP60510 307 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 ABCC6O95255 1503 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 AATKQ6ZMQ8 1374 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
RD3L-201ENST00000557640 BCL9O00512 1426 aa11.62□□□□□ -0.55
RD3L-201ENST00000557640 TNS2Q63HR2 1409 aa11.62□□□□□ -0.55
RD3L-201ENST00000557640 NRG2O14511 850 aaPredicted RBP11.62□□□□□ -0.55
RD3L-201ENST00000557640 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
RD3L-201ENST00000557640 MARCH10Q8NA82 808 aaPredicted RBP11.62□□□□□ -0.55
RD3L-201ENST00000557640 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
RD3L-201ENST00000557640 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
RD3L-201ENST00000557640 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
RD3L-201ENST00000557640 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
RD3L-201ENST00000557640 ZBTB7AO95365 584 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms