RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 TPSG1Q9NRR2 321 aa8.79□□□□□ -1
FOXN3-217ENST00000557572 RNF135Q8IUD6 432 aa8.78□□□□□ -1
FOXN3-217ENST00000557572 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
FOXN3-217ENST00000557572 NEURL1BA8MQ27 555 aa8.77□□□□□ -1.01
FOXN3-217ENST00000557572 CTBSQ01459 385 aa8.77□□□□□ -1.01
FOXN3-217ENST00000557572 PRSS36Q5K4E3 855 aa8.77□□□□□ -1.01
FOXN3-217ENST00000557572 ABHD17AQ96GS6 310 aa8.77□□□□□ -1.01
FOXN3-217ENST00000557572 ATXN7L1Q9ULK2 861 aaPredicted RBP8.77□□□□□ -1.01
FOXN3-217ENST00000557572 SPATA31C1P0DKV0 1188 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 FGFR3P22607 806 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 PHKA2P46019 1235 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 CLN3Q13286 438 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 PLVAPQ9BX97 442 aa8.76□□□□□ -1.01
FOXN3-217ENST00000557572 COBLO75128 1261 aa8.75□□□□□ -1.01
FOXN3-217ENST00000557572 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
FOXN3-217ENST00000557572 UBAP2LQ14157 1087 aaKnown RBP8.75□□□□□ -1.01
FOXN3-217ENST00000557572 CSB-PGBD3P0DP91 1061 aa8.74□□□□□ -1.01
FOXN3-217ENST00000557572 PGBD3Q8N328 593 aa8.74□□□□□ -1.01
FOXN3-217ENST00000557572 RUBCNLQ9H714 662 aa8.74□□□□□ -1.01
FOXN3-217ENST00000557572 A0A1B0GTH6 734 aa8.73□□□□□ -1.01
FOXN3-217ENST00000557572 LRP8Q14114 963 aa8.73□□□□□ -1.01
FOXN3-217ENST00000557572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
FOXN3-217ENST00000557572 TRIM11Q96F44 468 aa8.73□□□□□ -1.01
FOXN3-217ENST00000557572 BNIP3LO60238 219 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 ZMYND10O75800 440 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 ARAFP10398 606 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 LBRQ14739 615 aaKnown RBP8.72□□□□□ -1.01
FOXN3-217ENST00000557572 EFHC2Q5JST6 749 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 KRTAP4-7Q9BYR0 210 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 POLR3EQ9NVU0 708 aa8.72□□□□□ -1.01
FOXN3-217ENST00000557572 ARHGEF10LQ9HCE6 1279 aa8.71□□□□□ -1.02
FOXN3-217ENST00000557572 HYAL3O43820 417 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-217ENST00000557572 GIGYF1O75420 1035 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-217ENST00000557572 CYP2U1Q7Z449 544 aa8.7□□□□□ -1.02
FOXN3-217ENST00000557572 PNMA1Q8ND90 353 aa8.7□□□□□ -1.02
FOXN3-217ENST00000557572 TRIM66O15016 1216 aa8.69□□□□□ -1.02
FOXN3-217ENST00000557572 APBA3O96018 575 aa8.69□□□□□ -1.02
FOXN3-217ENST00000557572 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
FOXN3-217ENST00000557572 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
FOXN3-217ENST00000557572 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
FOXN3-217ENST00000557572 LCE1DQ5T752 114 aa8.67□□□□□ -1.02
FOXN3-217ENST00000557572 NDFIP2Q9NV92 336 aa8.67□□□□□ -1.02
FOXN3-217ENST00000557572 MSX1P28360 303 aa8.66□□□□□ -1.02
FOXN3-217ENST00000557572 PRRT3Q5FWE3 981 aa8.66□□□□□ -1.02
FOXN3-217ENST00000557572 SPDYE3A6NKU9 549 aa8.65□□□□□ -1.02
FOXN3-217ENST00000557572 ADH6P28332 368 aa8.65□□□□□ -1.02
FOXN3-217ENST00000557572 CENPCQ03188 943 aa8.65□□□□□ -1.02
FOXN3-217ENST00000557572 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
FOXN3-217ENST00000557572 ESF1Q9H501 851 aaKnown RBP8.65□□□□□ -1.02
FOXN3-217ENST00000557572 SCTRP47872 440 aa8.64□□□□□ -1.03
FOXN3-217ENST00000557572 ZSCAN10Q96SZ4 725 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-217ENST00000557572 GTF2E1P29083 439 aaPredicted RBP8.63□□□□□ -1.03
FOXN3-217ENST00000557572 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 MCTP1Q6DN14 999 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 KLF15Q9UIH9 416 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 PCDHB9Q9Y5E1 797 aa8.63□□□□□ -1.03
FOXN3-217ENST00000557572 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
FOXN3-217ENST00000557572 ZC3H15Q8WU90 426 aaKnown RBP8.62□□□□□ -1.03
FOXN3-217ENST00000557572 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
FOXN3-217ENST00000557572 PAX4O43316 350 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 AP1G2O75843 785 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.035e-7■□□□□ 8.3
FOXN3-217ENST00000557572 TXKP42681 527 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 C4orf17Q53FE4 359 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 CCDC125Q86Z20 511 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 OSBPL3Q9H4L5 887 aa8.61□□□□□ -1.03
FOXN3-217ENST00000557572 IL2RAP01589 272 aa8.6□□□□□ -1.03
FOXN3-217ENST00000557572 RNF20Q5VTR2 975 aa8.6□□□□□ -1.03
FOXN3-217ENST00000557572 FIGNL1Q6PIW4 674 aa8.6□□□□□ -1.03
FOXN3-217ENST00000557572 PCDHGC4Q9Y5F7 938 aa8.6□□□□□ -1.03
FOXN3-217ENST00000557572 FAM229AH3BQW9 127 aa8.59□□□□□ -1.03
FOXN3-217ENST00000557572 TRAK2O60296 914 aa8.59□□□□□ -1.03
FOXN3-217ENST00000557572 NACC1Q96RE7 527 aa8.59□□□□□ -1.03
FOXN3-217ENST00000557572 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
FOXN3-217ENST00000557572 GNRH1P01148 92 aa8.58□□□□□ -1.04
FOXN3-217ENST00000557572 PCBP4P57723 403 aaKnown RBP8.58□□□□□ -1.04
FOXN3-217ENST00000557572 FBXO31Q5XUX0 539 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-217ENST00000557572 CRISPLD1Q9H336 500 aa8.58□□□□□ -1.04
FOXN3-217ENST00000557572 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-217ENST00000557572 H2AFB1P0C5Y9 115 aa8.57□□□□□ -1.04
FOXN3-217ENST00000557572 H2AFB2P0C5Z0 115 aa8.57□□□□□ -1.04
FOXN3-217ENST00000557572 AK7Q96M32 723 aa8.57□□□□□ -1.04
FOXN3-217ENST00000557572 HMX1Q9NP08 348 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-217ENST00000557572 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
FOXN3-217ENST00000557572 CD33P20138 364 aa8.56□□□□□ -1.04
FOXN3-217ENST00000557572 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
FOXN3-217ENST00000557572 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
FOXN3-217ENST00000557572 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
FOXN3-217ENST00000557572 DCDC2BA2VCK2 349 aa8.55□□□□□ -1.04
FOXN3-217ENST00000557572 GRIK4Q16099 956 aa8.55□□□□□ -1.04
FOXN3-217ENST00000557572 PRR12Q9ULL5 1215 aa8.55□□□□□ -1.04
FOXN3-217ENST00000557572 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
FOXN3-217ENST00000557572 ALAS2P22557 587 aa8.54□□□□□ -1.04
FOXN3-217ENST00000557572 MAPTP10636 758 aaKnown RBP8.53□□□□□ -1.04
FOXN3-217ENST00000557572 PDE4DQ08499 809 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms