RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 SSFA2P28290 1259 aa7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 ATP13A2Q9NQ11 1180 aa7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 BCORL1Q5H9F3 1711 aa7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 PRG4Q92954 1404 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 ZNF335Q9H4Z2 1342 aaPredicted RBP7.77□□□□□ -1.17
MTHFD1-216ENST00000557539 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
MTHFD1-216ENST00000557539 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
MTHFD1-216ENST00000557539 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
MTHFD1-216ENST00000557539 MAP10Q9P2G4 905 aa7.76□□□□□ -1.17
MTHFD1-216ENST00000557539 RBM47A0AV96 593 aaKnown RBP7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 C11orf95C9JLR9 678 aaPredicted RBP7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 NCOA4Q13772 614 aa7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 SLFNL1Q499Z3 407 aa7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 ZNF511Q8NB15 262 aa7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 SLAIN2Q9P270 581 aa7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 ZC3H4Q9UPT8 1303 aaKnown RBP7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 GRIN2BQ13224 1484 aa7.75□□□□□ -1.17
MTHFD1-216ENST00000557539 CTHP32929 405 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 PTK7Q13308 1070 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 RNF135Q8IUD6 432 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 RAD54L2Q9Y4B4 1467 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 SHROOM2Q13796 1616 aa7.74□□□□□ -1.17
MTHFD1-216ENST00000557539 ABCC8Q09428 1581 aa7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 SNRPBP14678 240 aaKnown RBP7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 ATP2B4P23634 1241 aa7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 CLP1Q92989 425 aaKnown RBP7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 CDCA7Q9BWT1 371 aaPredicted RBP7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 PLB1Q6P1J6 1458 aa7.73□□□□□ -1.17
MTHFD1-216ENST00000557539 SOWAHDA6NJG2 315 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 SERPINB4P48594 390 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 C1QTNF8P60827 252 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 DNAJC14Q6Y2X3 702 aaPredicted RBP7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 USP35Q9P2H5 1018 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 PCDHB9Q9Y5E1 797 aa7.72□□□□□ -1.17
MTHFD1-216ENST00000557539 ASXL2Q76L83 1435 aa7.71□□□□□ -1.17
MTHFD1-216ENST00000557539 ERCC3P19447 782 aa7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 VARSP26640 1264 aaKnown RBP7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 PTK2Q05397 1052 aa7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 FOXJ1Q92949 421 aa7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 BIN2Q9UBW5 565 aaPredicted RBP7.71□□□□□ -1.18
MTHFD1-216ENST00000557539 DPYDQ12882 1025 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 C4orf48Q5BLP8 95 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 OGFOD1Q8N543 542 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 ZNF592Q92610 1267 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 MRRFQ96E11 262 aaKnown RBP7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 TRIM47Q96LD4 638 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 WASF2Q9Y6W5 498 aa7.7□□□□□ -1.18
MTHFD1-216ENST00000557539 POLA1P09884 1462 aaPredicted RBP7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 KIAA0586Q9BVV6 1533 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 SCNN1AP37088 669 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 MARSP56192 900 aaKnown RBP7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 EML3Q32P44 896 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 TRIM46Q7Z4K8 759 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 MPNDQ8N594 471 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 ZNF594Q96JF6 807 aaPredicted RBP7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 BCL2L13Q9BXK5 485 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 MAP3K4Q9Y6R4 1608 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 SOGA1O94964 1423 aa7.69□□□□□ -1.18
MTHFD1-216ENST00000557539 PREX1Q8TCU6 1659 aa7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 LZTS3O60299 673 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 BMP1P13497 986 aa7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 MCCD1P59942 119 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 NOM1Q5C9Z4 860 aaKnown RBP7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 KIAA1522Q9P206 1035 aaPredicted RBP7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
MTHFD1-216ENST00000557539 DNMBPQ6XZF7 1577 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 CAPN5O15484 640 aaPredicted RBP7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 ZNF16P17020 682 aaPredicted RBP7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 CLDN10P78369 228 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 MAP7D1Q3KQU3 841 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 PDXDC2PQ6P474 469 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 ARMC2Q8NEN0 867 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 OCSTAMPQ9BR26 566 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 SENP2Q9HC62 589 aa7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 DNAAF2Q9NVR5 837 aaKnown RBP7.67□□□□□ -1.18
MTHFD1-216ENST00000557539 NNTQ13423 1086 aa7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 TSGA10IPQ3SY00 556 aa7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 GIPC2Q8TF65 315 aa7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 KLF16Q9BXK1 252 aaPredicted RBP7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 IGSF5Q9NSI5 407 aa7.66□□□□□ -1.18
MTHFD1-216ENST00000557539 PRMT3O60678 531 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 ATP1A2P50993 1020 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 NUP160Q12769 1436 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 NBPF14Q5TI25 921 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 ADAM32Q8TC27 787 aa7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 GPKOWQ92917 476 aaPredicted RBP eCLIP7.65□□□□□ -1.18
MTHFD1-216ENST00000557539 CDK15Q96Q40 435 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms