RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
PSEN1-219ENST00000556951 SBF1O95248 1867 aa17.81■□□□□ 0.44
PSEN1-219ENST00000556951 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
PSEN1-219ENST00000556951 CYP27B1O15528 508 aa17.8■□□□□ 0.44
PSEN1-219ENST00000556951 TGFB2P61812 414 aa17.8■□□□□ 0.44
PSEN1-219ENST00000556951 TESK2Q96S53 571 aa17.8■□□□□ 0.44
PSEN1-219ENST00000556951 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
PSEN1-219ENST00000556951 TOGARAM1Q9Y4F4 1720 aa17.79■□□□□ 0.44
PSEN1-219ENST00000556951 MPRIPQ6WCQ1 1025 aa17.79■□□□□ 0.44
PSEN1-219ENST00000556951 WBP1LQ9NX94 342 aa17.79■□□□□ 0.44
PSEN1-219ENST00000556951 RNF181Q9P0P0 153 aa17.79■□□□□ 0.44
PSEN1-219ENST00000556951 CNTNAP1P78357 1384 aa17.79■□□□□ 0.44
PSEN1-219ENST00000556951 A0A0G2JLW4 131 aa17.78■□□□□ 0.44
PSEN1-219ENST00000556951 FYB1O15117 783 aa17.78■□□□□ 0.44
PSEN1-219ENST00000556951 FCHSD2O94868 740 aa17.78■□□□□ 0.44
PSEN1-219ENST00000556951 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
PSEN1-219ENST00000556951 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
PSEN1-219ENST00000556951 HSPA8P11142 646 aaKnown RBP17.77■□□□□ 0.44
PSEN1-219ENST00000556951 TATP17735 454 aaPredicted RBP17.77■□□□□ 0.44
PSEN1-219ENST00000556951 UBR3Q6ZT12 1888 aa17.77■□□□□ 0.43
PSEN1-219ENST00000556951 RTL1A6NKG5 1358 aa17.77■□□□□ 0.43
PSEN1-219ENST00000556951 C4BP0C0L5 1744 aa17.76■□□□□ 0.43
PSEN1-219ENST00000556951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
PSEN1-219ENST00000556951 HSP90AB2PQ58FF8 381 aa17.76■□□□□ 0.43
PSEN1-219ENST00000556951 PIGBQ92521 554 aa17.76■□□□□ 0.43
PSEN1-219ENST00000556951 HMGB2P26583 209 aaKnown RBP17.75■□□□□ 0.43
PSEN1-219ENST00000556951 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
PSEN1-219ENST00000556951 AK7Q96M32 723 aa17.75■□□□□ 0.43
PSEN1-219ENST00000556951 GGNBP2Q9H3C7 697 aa17.75■□□□□ 0.43
PSEN1-219ENST00000556951 PCDH11XQ9BZA7 1347 aa17.74■□□□□ 0.43
PSEN1-219ENST00000556951 PCDH11YQ9BZA8 1340 aa17.74■□□□□ 0.43
PSEN1-219ENST00000556951 PHF14O94880 888 aa17.74■□□□□ 0.43
PSEN1-219ENST00000556951 LINC00116Q8NCU8 138 aa17.74■□□□□ 0.43
PSEN1-219ENST00000556951 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
PSEN1-219ENST00000556951 INSRP06213 1382 aa17.73■□□□□ 0.43
PSEN1-219ENST00000556951 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
PSEN1-219ENST00000556951 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
PSEN1-219ENST00000556951 SSFA2P28290 1259 aa17.72■□□□□ 0.43
PSEN1-219ENST00000556951 ITGB4P16144 1822 aa17.72■□□□□ 0.43
PSEN1-219ENST00000556951 DPEP1P16444 411 aa17.71■□□□□ 0.43
PSEN1-219ENST00000556951 VEGFBP49765 207 aa17.71■□□□□ 0.43
PSEN1-219ENST00000556951 ITPK1Q13572 414 aa17.71■□□□□ 0.43
PSEN1-219ENST00000556951 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.42
PSEN1-219ENST00000556951 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
PSEN1-219ENST00000556951 SIK1P57059 783 aa17.7■□□□□ 0.42
PSEN1-219ENST00000556951 CFAP44Q96MT7 982 aa17.7■□□□□ 0.42
PSEN1-219ENST00000556951 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
PSEN1-219ENST00000556951 MMP10P09238 476 aa17.68■□□□□ 0.42
PSEN1-219ENST00000556951 DCAF5Q96JK2 942 aa17.68■□□□□ 0.42
PSEN1-219ENST00000556951 NSD3Q9BZ95 1437 aa17.68■□□□□ 0.42
PSEN1-219ENST00000556951 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
PSEN1-219ENST00000556951 PRPF38BQ5VTL8 546 aaKnown RBP17.67■□□□□ 0.42
PSEN1-219ENST00000556951 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
PSEN1-219ENST00000556951 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
PSEN1-219ENST00000556951 SMG6Q86US8 1419 aaKnown RBP17.66■□□□□ 0.42
PSEN1-219ENST00000556951 GNPATO15228 680 aa17.66■□□□□ 0.42
PSEN1-219ENST00000556951 KCNA3P22001 575 aa17.66■□□□□ 0.42
PSEN1-219ENST00000556951 FLT4P35916 1363 aa17.66■□□□□ 0.42
PSEN1-219ENST00000556951 POTECB2RU33 542 aa17.65■□□□□ 0.42
PSEN1-219ENST00000556951 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
PSEN1-219ENST00000556951 KIF24Q5T7B8 1368 aa17.65■□□□□ 0.42
PSEN1-219ENST00000556951 ATP6V1AP38606 617 aa17.64■□□□□ 0.41
PSEN1-219ENST00000556951 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
PSEN1-219ENST00000556951 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
PSEN1-219ENST00000556951 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
PSEN1-219ENST00000556951 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
PSEN1-219ENST00000556951 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
PSEN1-219ENST00000556951 MAP2K1Q02750 393 aaPredicted RBP17.62■□□□□ 0.41
PSEN1-219ENST00000556951 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
PSEN1-219ENST00000556951 SPG7Q9UQ90 795 aa17.62■□□□□ 0.41
PSEN1-219ENST00000556951 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
PSEN1-219ENST00000556951 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
PSEN1-219ENST00000556951 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
PSEN1-219ENST00000556951 EYA1Q99502 592 aa17.61■□□□□ 0.41
PSEN1-219ENST00000556951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.61■□□□□ 0.416e-6■□□□□ 8.9
PSEN1-219ENST00000556951 TMOD3Q9NYL9 352 aa17.61■□□□□ 0.41
PSEN1-219ENST00000556951 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
PSEN1-219ENST00000556951 PHKG2P15735 406 aa17.6■□□□□ 0.41
PSEN1-219ENST00000556951 TMF1P82094 1093 aa17.6■□□□□ 0.41
PSEN1-219ENST00000556951 ARHGEF1Q92888 912 aaKnown RBP17.6■□□□□ 0.41
PSEN1-219ENST00000556951 CCDC88AQ3V6T2 1871 aa17.59■□□□□ 0.41
PSEN1-219ENST00000556951 C4AP0C0L4 1744 aa17.59■□□□□ 0.41
PSEN1-219ENST00000556951 GYS1P13807 737 aa17.59■□□□□ 0.41
PSEN1-219ENST00000556951 TRAPPC3LQ5T215 181 aa17.59■□□□□ 0.41
PSEN1-219ENST00000556951 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
PSEN1-219ENST00000556951 KDRP35968 1356 aa17.58■□□□□ 0.4
PSEN1-219ENST00000556951 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.4
PSEN1-219ENST00000556951 PASKQ96RG2 1323 aa17.58■□□□□ 0.4
PSEN1-219ENST00000556951 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
PSEN1-219ENST00000556951 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
PSEN1-219ENST00000556951 MCOLN1Q9GZU1 580 aa17.57■□□□□ 0.4
PSEN1-219ENST00000556951 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
PSEN1-219ENST00000556951 TMEM88BA6NKF7 163 aa17.56■□□□□ 0.4
PSEN1-219ENST00000556951 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
PSEN1-219ENST00000556951 LMNB1P20700 586 aa17.55■□□□□ 0.4
PSEN1-219ENST00000556951 RASSF7Q02833 373 aa17.55■□□□□ 0.4
PSEN1-219ENST00000556951 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
PSEN1-219ENST00000556951 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
PSEN1-219ENST00000556951 PPM1GO15355 546 aaPredicted RBP17.53■□□□□ 0.4
PSEN1-219ENST00000556951 POTEIP0CG38 1075 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms