RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 CABLES1Q8TDN4 633 aa10.82□□□□□ -0.68
SUPT16H-204ENST00000555943 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
SUPT16H-204ENST00000555943 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
SUPT16H-204ENST00000555943 APLP1P51693 650 aa10.8□□□□□ -0.68
SUPT16H-204ENST00000555943 FLIIQ13045 1269 aa10.8□□□□□ -0.68
SUPT16H-204ENST00000555943 PRPF38BQ5VTL8 546 aaKnown RBP10.8□□□□□ -0.68
SUPT16H-204ENST00000555943 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
SUPT16H-204ENST00000555943 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 MORN1Q5T089 497 aa10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 KCTD12Q96CX2 325 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 PRR14Q9BWN1 585 aa10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 WBP1LQ9NX94 342 aa10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 SLAIN2Q9P270 581 aa10.79□□□□□ -0.68
SUPT16H-204ENST00000555943 SETBP1Q9Y6X0 1596 aa10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 NUTM2BA6NNL0 878 aaPredicted RBP10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 NUTM2EB1AL46 878 aaPredicted RBP10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 NUTM2AQ8IVF1 878 aaPredicted RBP10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 ZBTB3Q9H5J0 574 aa10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 ADGRF5Q8IZF2 1346 aa10.78□□□□□ -0.68
SUPT16H-204ENST00000555943 C19orf44Q9H6X5 657 aa10.77□□□□□ -0.69
SUPT16H-204ENST00000555943 PHLPP1O60346 1717 aa10.77□□□□□ -0.69
SUPT16H-204ENST00000555943 DCCP43146 1447 aa10.76□□□□□ -0.69
SUPT16H-204ENST00000555943 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-204ENST00000555943 MCM6Q14566 821 aa10.76□□□□□ -0.69
SUPT16H-204ENST00000555943 TMEM259Q4ZIN3 620 aa10.76□□□□□ -0.69
SUPT16H-204ENST00000555943 SLC27A5Q9Y2P5 690 aa10.76□□□□□ -0.69
SUPT16H-204ENST00000555943 MYOM2P54296 1465 aa10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 NEXMIFQ5QGS0 1516 aa10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 ATF3P18847 181 aa10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 MTMR2Q13614 643 aa10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 NRXN3Q9Y4C0 1643 aa10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 XRN1Q8IZH2 1706 aaKnown RBP10.75□□□□□ -0.69
SUPT16H-204ENST00000555943 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 NBPF8Q3BBV2 869 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 SYMPKQ92797 1274 aaKnown RBP10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 JCADQ9P266 1359 aa10.74□□□□□ -0.69
SUPT16H-204ENST00000555943 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 SNRKQ9NRH2 765 aa10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 PCDHB3Q9Y5E6 796 aa10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 PRAG1Q86YV5 1406 aa10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 AHDC1Q5TGY3 1603 aaPredicted RBP10.73□□□□□ -0.69
SUPT16H-204ENST00000555943 AP1G2O75843 785 aa10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 ROCK2O75116 1388 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 PIK3C2GO75747 1445 aa10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 PTPRUQ92729 1446 aa10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 COL16A1Q07092 1604 aaPredicted RBP10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 PPLO60437 1756 aa10.72□□□□□ -0.69
SUPT16H-204ENST00000555943 SETD1AO15047 1707 aaKnown RBP10.71□□□□□ -0.69
SUPT16H-204ENST00000555943 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.69
SUPT16H-204ENST00000555943 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.69
SUPT16H-204ENST00000555943 ZMYND15Q9H091 742 aa10.71□□□□□ -0.69
SUPT16H-204ENST00000555943 SHPRHQ149N8 1683 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 SPDYE5A6NIY4 337 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 CFAP99D6REC4 459 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 Q3C1V9 767 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 BLOC1S3Q6QNY0 202 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 IFT172Q9UG01 1749 aa10.7□□□□□ -0.7
SUPT16H-204ENST00000555943 NBPF1Q3BBV0 1214 aa10.69□□□□□ -0.7
SUPT16H-204ENST00000555943 TMEM132EQ6IEE7 984 aa10.69□□□□□ -0.7
SUPT16H-204ENST00000555943 RNF19BQ6ZMZ0 732 aa10.69□□□□□ -0.7
SUPT16H-204ENST00000555943 SCUBE3Q8IX30 993 aa10.69□□□□□ -0.7
SUPT16H-204ENST00000555943 ADGRL3Q9HAR2 1447 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 METP08581 1390 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 NR1I2O75469 434 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 PTPN5P54829 565 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 RETREG3Q86VR2 466 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 PRR7Q8TB68 274 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 STK26Q9P289 416 aa10.68□□□□□ -0.7
SUPT16H-204ENST00000555943 PTCH1Q13635 1447 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 NHSL1Q5SYE7 1610 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 NYAP1Q6ZVC0 841 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 BRINP3Q76B58 766 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 MTMR14Q8NCE2 650 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 MST1RQ04912 1400 aa10.67□□□□□ -0.7
SUPT16H-204ENST00000555943 COPS2P61201 443 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 TSC1Q92574 1164 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 CLUAP1Q96AJ1 413 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 THAP11Q96EK4 314 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 ASXL1Q8IXJ9 1541 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 NALCNQ8IZF0 1738 aa10.66□□□□□ -0.7
SUPT16H-204ENST00000555943 HELBQ8NG08 1087 aaPredicted RBP10.65□□□□□ -0.7
SUPT16H-204ENST00000555943 TRAK1Q9UPV9 953 aa10.65□□□□□ -0.7
SUPT16H-204ENST00000555943 LAMC1P11047 1609 aa10.65□□□□□ -0.7
SUPT16H-204ENST00000555943 EIF3AQ14152 1382 aaKnown RBP10.65□□□□□ -0.71
SUPT16H-204ENST00000555943 FMNL1O95466 1100 aaPredicted RBP10.64□□□□□ -0.71
SUPT16H-204ENST00000555943 ZNF772Q68DY9 489 aaPredicted RBP10.64□□□□□ -0.71
SUPT16H-204ENST00000555943 LRRC59Q96AG4 307 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms