RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 RFC5P40937 340 aa9.57□□□□□ -0.88
SNX6-204ENST00000555541 GDF2Q9UK05 429 aaPredicted RBP9.57□□□□□ -0.88
SNX6-204ENST00000555541 CYP2U1Q7Z449 544 aa9.56□□□□□ -0.88
SNX6-204ENST00000555541 BCANQ96GW7 911 aa9.56□□□□□ -0.88
SNX6-204ENST00000555541 ARHGEF10LQ9HCE6 1279 aa9.56□□□□□ -0.88
SNX6-204ENST00000555541 NDFIP2Q9NV92 336 aa9.56□□□□□ -0.88
SNX6-204ENST00000555541 C1QTNF9BB2RNN3 333 aa9.55□□□□□ -0.88
SNX6-204ENST00000555541 CD163Q86VB7 1156 aa9.55□□□□□ -0.88
SNX6-204ENST00000555541 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
SNX6-204ENST00000555541 GOPCQ9HD26 462 aa9.55□□□□□ -0.88
SNX6-204ENST00000555541 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
SNX6-204ENST00000555541 IL2RAP01589 272 aa9.54□□□□□ -0.88
SNX6-204ENST00000555541 SLCO4C1Q6ZQN7 724 aa9.53□□□□□ -0.88
SNX6-204ENST00000555541 GOLGA6L1Q8N7Z2 621 aa9.53□□□□□ -0.88
SNX6-204ENST00000555541 CHRNA4P43681 627 aa9.52□□□□□ -0.89
SNX6-204ENST00000555541 LBRQ14739 615 aaKnown RBP9.52□□□□□ -0.89
SNX6-204ENST00000555541 ESYT1Q9BSJ8 1104 aa9.52□□□□□ -0.89
SNX6-204ENST00000555541 FHDC1Q9C0D6 1143 aaPredicted RBP9.52□□□□□ -0.89
SNX6-204ENST00000555541 GPAMQ9HCL2 828 aa9.52□□□□□ -0.89
SNX6-204ENST00000555541 A0A1B0GTH6 734 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 DGKGP49619 791 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 CENPCQ03188 943 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 GRIN2CQ14957 1233 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 RNF20Q5VTR2 975 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
SNX6-204ENST00000555541 GPR37L1O60883 481 aa9.5□□□□□ -0.89
SNX6-204ENST00000555541 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
SNX6-204ENST00000555541 BTBD6Q96KE9 485 aa9.5□□□□□ -0.89
SNX6-204ENST00000555541 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
SNX6-204ENST00000555541 RAB6BQ9NRW1 208 aa9.5□□□□□ -0.89
SNX6-204ENST00000555541 ATXN7L1Q9ULK2 861 aaPredicted RBP9.5□□□□□ -0.89
SNX6-204ENST00000555541 GNB5O14775 395 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 GNRH1P01148 92 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 EPXP11678 715 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 XAGE2Q96GT9 111 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 GGA1Q9UJY5 639 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 HCN2Q9UL51 889 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 ATP1B4Q9UN42 357 aaPredicted RBP9.49□□□□□ -0.89
SNX6-204ENST00000555541 PCDHB11Q9Y5F2 797 aa9.49□□□□□ -0.89
SNX6-204ENST00000555541 BNIP3LO60238 219 aa9.48□□□□□ -0.89
SNX6-204ENST00000555541 CTBSQ01459 385 aa9.48□□□□□ -0.89
SNX6-204ENST00000555541 KRTAP1-3Q8IUG1 177 aa9.48□□□□□ -0.89
SNX6-204ENST00000555541 PHKA2P46019 1235 aa9.47□□□□□ -0.89
SNX6-204ENST00000555541 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
SNX6-204ENST00000555541 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
SNX6-204ENST00000555541 RUBCNLQ9H714 662 aa9.47□□□□□ -0.89
SNX6-204ENST00000555541 MSX1P28360 303 aa9.46□□□□□ -0.9
SNX6-204ENST00000555541 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
SNX6-204ENST00000555541 ABHD17AQ96GS6 310 aa9.46□□□□□ -0.9
SNX6-204ENST00000555541 DNAAF2Q9NVR5 837 aaKnown RBP9.46□□□□□ -0.9
SNX6-204ENST00000555541 BMP4P12644 408 aa9.45□□□□□ -0.9
SNX6-204ENST00000555541 FGFR3P22607 806 aa9.45□□□□□ -0.9
SNX6-204ENST00000555541 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
SNX6-204ENST00000555541 ARAFP10398 606 aa9.44□□□□□ -0.9
SNX6-204ENST00000555541 NR1H3Q13133 447 aa9.44□□□□□ -0.9
SNX6-204ENST00000555541 IL27Q8NEV9 243 aa9.44□□□□□ -0.9
SNX6-204ENST00000555541 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
SNX6-204ENST00000555541 CRISPLD1Q9H336 500 aa9.44□□□□□ -0.9
SNX6-204ENST00000555541 KLF15Q9UIH9 416 aa9.44□□□□□ -0.9
SNX6-204ENST00000555541 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
SNX6-204ENST00000555541 KRTAP4-12Q9BQ66 201 aa9.43□□□□□ -0.9
SNX6-204ENST00000555541 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
SNX6-204ENST00000555541 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
SNX6-204ENST00000555541 CDCA7Q9BWT1 371 aaPredicted RBP9.42□□□□□ -0.9
SNX6-204ENST00000555541 PIK3R2O00459 728 aa9.41□□□□□ -0.9
SNX6-204ENST00000555541 AMPD1P23109 780 aa9.41□□□□□ -0.9
SNX6-204ENST00000555541 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
SNX6-204ENST00000555541 DOC2BQ14184 412 aa9.4□□□□□ -0.9
SNX6-204ENST00000555541 SEMA6BQ9H3T3 888 aa9.4□□□□□ -0.9
SNX6-204ENST00000555541 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
SNX6-204ENST00000555541 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
SNX6-204ENST00000555541 EFHC2Q5JST6 749 aa9.39□□□□□ -0.91
SNX6-204ENST00000555541 PPARGC1BQ86YN6 1023 aaKnown RBP9.39□□□□□ -0.91
SNX6-204ENST00000555541 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
SNX6-204ENST00000555541 NOP53Q9NZM5 478 aaKnown RBP9.39□□□□□ -0.91
SNX6-204ENST00000555541 NEURL1BA8MQ27 555 aa9.38□□□□□ -0.91
SNX6-204ENST00000555541 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
SNX6-204ENST00000555541 GNASQ5JWF2 1037 aa9.38□□□□□ -0.91
SNX6-204ENST00000555541 CHSY3Q70JA7 882 aa9.38□□□□□ -0.91
SNX6-204ENST00000555541 TRIM11Q96F44 468 aa9.38□□□□□ -0.91
SNX6-204ENST00000555541 ZMYM1Q5SVZ6 1142 aa9.37□□□□□ -0.91
SNX6-204ENST00000555541 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
SNX6-204ENST00000555541 RHBDD1Q8TEB9 315 aa9.37□□□□□ -0.91
SNX6-204ENST00000555541 ZCCHC2Q9C0B9 1178 aaKnown RBP9.37□□□□□ -0.91
SNX6-204ENST00000555541 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
SNX6-204ENST00000555541 ATP4AP20648 1035 aa9.36□□□□□ -0.91
SNX6-204ENST00000555541 RSPO4Q2I0M5 234 aaPredicted RBP9.36□□□□□ -0.91
SNX6-204ENST00000555541 NKAPLQ5M9Q1 402 aa9.36□□□□□ -0.91
SNX6-204ENST00000555541 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
SNX6-204ENST00000555541 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 FAM182BQ5T319 152 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 CEP126Q9P2H0 1117 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 PCDHGC4Q9Y5F7 938 aa9.35□□□□□ -0.91
SNX6-204ENST00000555541 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
SNX6-204ENST00000555541 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
SNX6-204ENST00000555541 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
SNX6-204ENST00000555541 AVENQ9NQS1 362 aaPredicted RBP9.34□□□□□ -0.91
SNX6-204ENST00000555541 SOCS7O14512 581 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms