RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZIC2O95409 532 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-228ENST00000554592 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
ATXN3-228ENST00000554592 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
ATXN3-228ENST00000554592 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
ATXN3-228ENST00000554592 NDUFB9Q9Y6M9 179 aa8.02□□□□□ -1.13
ATXN3-228ENST00000554592 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
ATXN3-228ENST00000554592 ESPNB1AK53 854 aa8.01□□□□□ -1.13
ATXN3-228ENST00000554592 SNRPBP14678 240 aaKnown RBP8.01□□□□□ -1.13
ATXN3-228ENST00000554592 CCDC116Q8IYX3 515 aa8.01□□□□□ -1.13
ATXN3-228ENST00000554592 ZMYND15Q9H091 742 aa8.01□□□□□ -1.13
ATXN3-228ENST00000554592 ZNF518AQ6AHZ1 1483 aa8□□□□□ -1.13
ATXN3-228ENST00000554592 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
ATXN3-228ENST00000554592 FLIIQ13045 1269 aa8□□□□□ -1.13
ATXN3-228ENST00000554592 INTS6LQ5JSJ4 861 aaKnown RBP8□□□□□ -1.13
ATXN3-228ENST00000554592 TBC1D2BQ9UPU7 963 aa8□□□□□ -1.13
ATXN3-228ENST00000554592 NCOA1Q15788 1441 aa8□□□□□ -1.13
ATXN3-228ENST00000554592 ZNF335Q9H4Z2 1342 aaPredicted RBP8□□□□□ -1.13
ATXN3-228ENST00000554592 PREX1Q8TCU6 1659 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 NR1H3Q13133 447 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-228ENST00000554592 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
ATXN3-228ENST00000554592 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 FER1L4A9Z1Z3 1794 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 STRCQ7RTU9 1775 aa7.99□□□□□ -1.13
ATXN3-228ENST00000554592 SETD1BQ9UPS6 1966 aaKnown RBP7.99□□□□□ -1.13
ATXN3-228ENST00000554592 ZMYM3Q14202 1370 aa7.98□□□□□ -1.13
ATXN3-228ENST00000554592 IRF5Q13568 498 aa7.98□□□□□ -1.13
ATXN3-228ENST00000554592 MCM6Q14566 821 aa7.98□□□□□ -1.13
ATXN3-228ENST00000554592 DZIP3Q86Y13 1208 aaKnown RBP7.98□□□□□ -1.13
ATXN3-228ENST00000554592 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
ATXN3-228ENST00000554592 MLH3Q9UHC1 1453 aa7.98□□□□□ -1.13
ATXN3-228ENST00000554592 EEA1Q15075 1411 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 TOM1O60784 492 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 HSPA1LP34931 641 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 Q6ZVU0 165 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 MEIOBQ8N635 442 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 KIFC2Q96AC6 838 aa7.97□□□□□ -1.13
ATXN3-228ENST00000554592 NPATQ14207 1427 aa7.96□□□□□ -1.13
ATXN3-228ENST00000554592 APBB1O00213 710 aa7.96□□□□□ -1.14
ATXN3-228ENST00000554592 UBTFP17480 764 aaKnown RBP7.96□□□□□ -1.14
ATXN3-228ENST00000554592 AGLP35573 1532 aa7.96□□□□□ -1.14
ATXN3-228ENST00000554592 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
ATXN3-228ENST00000554592 TROQ12816 1431 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-228ENST00000554592 FMN1Q68DA7 1419 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 ERVH48-1M5A8F1 160 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
ATXN3-228ENST00000554592 CBLBQ13191 982 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-228ENST00000554592 PURBQ96QR8 312 aaKnown RBP7.95□□□□□ -1.14
ATXN3-228ENST00000554592 TMPRSS4Q9NRS4 437 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 CLIP1P30622 1438 aa7.95□□□□□ -1.14
ATXN3-228ENST00000554592 ARHGAP5Q13017 1502 aa7.94□□□□□ -1.14
ATXN3-228ENST00000554592 REREQ9P2R6 1566 aa7.94□□□□□ -1.14
ATXN3-228ENST00000554592 LILRA1O75019 489 aa7.94□□□□□ -1.14
ATXN3-228ENST00000554592 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-228ENST00000554592 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
ATXN3-228ENST00000554592 KDM5CP41229 1560 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 TREML4Q6UXN2 200 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 SEPT12Q8IYM1 358 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
ATXN3-228ENST00000554592 SPAG9O60271 1321 aaKnown RBP7.93□□□□□ -1.14
ATXN3-228ENST00000554592 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
ATXN3-228ENST00000554592 ADD1P35611 737 aaKnown RBP7.92□□□□□ -1.14
ATXN3-228ENST00000554592 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-228ENST00000554592 GGT6Q6P531 493 aa7.92□□□□□ -1.14
ATXN3-228ENST00000554592 KDF1Q8NAX2 398 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-228ENST00000554592 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-228ENST00000554592 CLUAP1Q96AJ1 413 aa7.92□□□□□ -1.14
ATXN3-228ENST00000554592 ZNF777Q9ULD5 760 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-228ENST00000554592 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
ATXN3-228ENST00000554592 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-228ENST00000554592 SCARF1Q14162 830 aa7.91□□□□□ -1.14
ATXN3-228ENST00000554592 COG6Q9Y2V7 657 aa7.91□□□□□ -1.14
ATXN3-228ENST00000554592 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
ATXN3-228ENST00000554592 SOS2Q07890 1332 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-228ENST00000554592 RAB15P59190 212 aa7.9□□□□□ -1.14
ATXN3-228ENST00000554592 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
ATXN3-228ENST00000554592 TSEN34Q9BSV6 310 aaKnown RBP7.9□□□□□ -1.14
ATXN3-228ENST00000554592 C3P01024 1663 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
ATXN3-228ENST00000554592 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 A6NJR5 290 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
ATXN3-228ENST00000554592 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 ANKLE2Q86XL3 938 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 CEP126Q9P2H0 1117 aa7.89□□□□□ -1.15
ATXN3-228ENST00000554592 SOBPA7XYQ1 873 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 SPINT1O43278 529 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 BMP2P12643 396 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 ABL2P42684 1182 aa7.88□□□□□ -1.15
ATXN3-228ENST00000554592 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-228ENST00000554592 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms