RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 EIF4A2Q14240 407 aaKnown RBP9.31□□□□□ -0.92
PCNX4-208ENST00000554534 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
PCNX4-208ENST00000554534 TRAPPC3LQ5T215 181 aa9.31□□□□□ -0.92
PCNX4-208ENST00000554534 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
PCNX4-208ENST00000554534 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
PCNX4-208ENST00000554534 ADCY9O60503 1353 aa9.31□□□□□ -0.92
PCNX4-208ENST00000554534 PKD1L3Q7Z443 1732 aa9.31□□□□□ -0.92
PCNX4-208ENST00000554534 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
PCNX4-208ENST00000554534 FCHSD2O94868 740 aa9.3□□□□□ -0.92
PCNX4-208ENST00000554534 SSFA2P28290 1259 aa9.3□□□□□ -0.92
PCNX4-208ENST00000554534 IFNL2Q8IZJ0 200 aa9.3□□□□□ -0.92
PCNX4-208ENST00000554534 AEBP1Q8IUX7 1158 aa9.29□□□□□ -0.92
PCNX4-208ENST00000554534 RTCBQ9Y3I0 505 aaKnown RBP9.29□□□□□ -0.92
PCNX4-208ENST00000554534 CICQ96RK0 1608 aaPredicted RBP9.29□□□□□ -0.92
PCNX4-208ENST00000554534 WASHC2AQ641Q2 1341 aa9.29□□□□□ -0.92
PCNX4-208ENST00000554534 PXDNLA1KZ92 1463 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 KIAA1551Q9HCM1 1747 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
PCNX4-208ENST00000554534 CAPN15O75808 1086 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 GYS1P13807 737 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 KCNA3P22001 575 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 CHRNA5P30532 468 aa9.28□□□□□ -0.92
PCNX4-208ENST00000554534 RFC4P35249 363 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 CABP4P57796 275 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 CNGB1Q14028 1251 aaPredicted RBP9.27□□□□□ -0.93
PCNX4-208ENST00000554534 FKBP8Q14318 412 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 C9orf131Q5VYM1 1079 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 ZNF530Q6P9A1 599 aaPredicted RBP9.27□□□□□ -0.93
PCNX4-208ENST00000554534 DNAJC5GQ8N7S2 189 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 NFATC2IPQ8NCF5 419 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 RRAGCQ9HB90 399 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 PARP3Q9Y6F1 533 aa9.27□□□□□ -0.93
PCNX4-208ENST00000554534 PCGF6Q9BYE7 350 aa9.26□□□□□ -0.93
PCNX4-208ENST00000554534 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 MTHFSP49914 203 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 DDR1Q08345 913 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 NLGN1Q8N2Q7 840 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 PANK3Q9H999 370 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 CCDC87Q9NVE4 849 aa9.25□□□□□ -0.93
PCNX4-208ENST00000554534 KDM6AO15550 1401 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-208ENST00000554534 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 TOMM70O94826 608 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
PCNX4-208ENST00000554534 TGFB2P61812 414 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 RASSF7Q02833 373 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 SLC39A6Q13433 755 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 PLEKHO1Q53GL0 409 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-208ENST00000554534 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 CCDC24Q8N4L8 307 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.939e-7■■□□□ 12.7
PCNX4-208ENST00000554534 ZNF219Q9P2Y4 722 aaPredicted RBP9.24□□□□□ -0.93
PCNX4-208ENST00000554534 C4AP0C0L4 1744 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 KIF13BQ9NQT8 1826 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 KDRP35968 1356 aa9.24□□□□□ -0.93
PCNX4-208ENST00000554534 NCAPD2Q15021 1401 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 KCPQ6ZWJ8 1503 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 ERVV-2B6SEH9 535 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 APLP1P51693 650 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 PRELPP51888 382 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 COL13A1Q5TAT6 717 aaPredicted RBP9.23□□□□□ -0.93
PCNX4-208ENST00000554534 SULT6B1Q6IMI4 303 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 DNAJC10Q8IXB1 793 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 RNF181Q9P0P0 153 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
PCNX4-208ENST00000554534 C10orf71Q711Q0 1435 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 ANKRD26Q9UPS8 1709 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 HSPA5P11021 654 aaKnown RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 DALRD3Q5D0E6 543 aaKnown RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 RC3H1Q5TC82 1133 aaKnown RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 USPL1Q5W0Q7 1092 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 INTS5Q6P9B9 1019 aaKnown RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 MORC1Q86VD1 984 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 C16orf71Q8IYS4 520 aaPredicted RBP9.22□□□□□ -0.93
PCNX4-208ENST00000554534 DCAF5Q96JK2 942 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 PIM2Q9P1W9 311 aa9.22□□□□□ -0.93
PCNX4-208ENST00000554534 BRCA1P38398 1863 aaKnown RBP9.21□□□□□ -0.93
PCNX4-208ENST00000554534 HMOX1P09601 288 aa9.21□□□□□ -0.94
PCNX4-208ENST00000554534 BICDL1Q6ZP65 573 aa9.21□□□□□ -0.94
PCNX4-208ENST00000554534 SBF1O95248 1867 aa9.21□□□□□ -0.94
PCNX4-208ENST00000554534 CCDC88AQ3V6T2 1871 aa9.21□□□□□ -0.94
PCNX4-208ENST00000554534 PCNTO95613 3336 aa9.2□□□□□ -0.94
PCNX4-208ENST00000554534 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
PCNX4-208ENST00000554534 CNTNAP4Q9C0A0 1308 aa9.2□□□□□ -0.94
PCNX4-208ENST00000554534 TJP1Q07157 1748 aa9.19□□□□□ -0.94
PCNX4-208ENST00000554534 WDR90Q96KV7 1748 aa9.19□□□□□ -0.94
PCNX4-208ENST00000554534 POLRMTO00411 1230 aaKnown RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 HMGB2P26583 209 aaKnown RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 TM4SF1P30408 202 aa9.19□□□□□ -0.94
PCNX4-208ENST00000554534 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 USP42Q9H9J4 1324 aaKnown RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 AFDNP55196 1824 aaKnown RBP9.19□□□□□ -0.94
PCNX4-208ENST00000554534 ARFGEF1Q9Y6D6 1849 aa9.19□□□□□ -0.94
PCNX4-208ENST00000554534 ZPR1O75312 459 aa9.18□□□□□ -0.94
PCNX4-208ENST00000554534 HSP90AB1P08238 724 aaKnown RBP9.18□□□□□ -0.94
PCNX4-208ENST00000554534 ADRA2BP18089 450 aa9.18□□□□□ -0.94
PCNX4-208ENST00000554534 NFIXQ14938 502 aa9.18□□□□□ -0.94
PCNX4-208ENST00000554534 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms