RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 TOMM22Q9NS69 142 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 ATP10AO60312 1499 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 PPFIA2O75334 1257 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 TBC1D32Q96NH3 1257 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 TMX1Q9H3N1 280 aa10.26□□□□□ -0.77
HNRNPC-211ENST00000554455 CDC42BPBQ9Y5S2 1711 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 BLMP54132 1417 aaPredicted RBP10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 ICA1Q05084 483 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 AMOTQ4VCS5 1084 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 NME8Q8N427 588 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 MMTAG2Q9BU76 263 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 RCAN3Q9UKA8 241 aa10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
HNRNPC-211ENST00000554455 RTEL1-TNFRSF6BF6WH68 1400 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 ST20-MTHFSA0A0A6YYL1 179 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 SGSM2O43147 1006 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 FOXD4L6Q3SYB3 417 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 FOXD4L3Q6VB84 417 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 SYT10Q6XYQ8 523 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 MMS22LQ6ZRQ5 1243 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 NUTM1Q86Y26 1132 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 TSC1Q92574 1164 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 RIPOR2Q9Y4F9 1068 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 TNNT1P13805 278 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 RBM5P52756 815 aaKnown RBP eCLIP10.24□□□□□ -0.775e-14■■□□□ 12.8
HNRNPC-211ENST00000554455 GYS2P54840 703 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 PDCD2Q16342 344 aaPredicted RBP10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 FAXDC2Q96IV6 333 aa10.24□□□□□ -0.77
HNRNPC-211ENST00000554455 CGNL1Q0VF96 1302 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 MAPK8IP3Q9UPT6 1336 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 FAM163BP0C2L3 166 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 AP1ARQ63HQ0 302 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 FMNL3Q8IVF7 1028 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 ZNF397Q8NF99 534 aaPredicted RBP10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 A1CFQ9NQ94 594 aaKnown RBP10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 TBC1D2BQ9UPU7 963 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 A2MP01023 1474 aa10.23□□□□□ -0.77
HNRNPC-211ENST00000554455 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 SYNRGQ9UMZ2 1314 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 KINO60870 393 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 SKILP12757 684 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 RWDD2BP57060 319 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 DZIP3Q86Y13 1208 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 SYNPO2Q9UMS6 1093 aa10.22□□□□□ -0.77
HNRNPC-211ENST00000554455 RAB3GAP1Q15042 981 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 HSP90B2PQ58FF3 399 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 PPM1EQ8WY54 764 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 SNX21Q969T3 373 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 SLX1AQ9BQ83 275 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 TMX4Q9H1E5 349 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 PLA2R1Q13018 1463 aa10.21□□□□□ -0.77
HNRNPC-211ENST00000554455 MYO5CQ9NQX4 1742 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 NUCB2P80303 420 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 SART3Q15020 963 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 SF3A1Q15459 793 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 PACS2Q86VP3 889 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 EFCAB13Q8IY85 973 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 GPT2Q8TD30 523 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 JARID2Q92833 1246 aaPredicted RBP10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 FAM212AQ96EL1 285 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 SH3GL3Q99963 347 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 MAF1Q9H063 256 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 RRP15Q9Y3B9 282 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 V9GYY5 206 aaPredicted RBP10.21□□□□□ -0.78
HNRNPC-211ENST00000554455 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 RIOK3O14730 519 aaKnown RBP10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 CAND2O75155 1236 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 SLC5A9Q2M3M2 681 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 TEX35Q5T0J7 233 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 CCDC26Q8TAB7 109 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 TRERF1Q96PN7 1200 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 VEZTQ9HBM0 779 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 SUN2Q9UH99 717 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 TRAK1Q9UPV9 953 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 ERBINQ96RT1 1412 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 SYCP2Q9BX26 1530 aa10.2□□□□□ -0.78
HNRNPC-211ENST00000554455 TRIM66O15016 1216 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 PER1O15534 1290 aaPredicted RBP10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 TPM1P09493 284 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 LSM14AQ8ND56 463 aaKnown RBP10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 PIK3R5Q8WYR1 880 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 CHCHD3Q9NX63 227 aaKnown RBP10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 SMC2O95347 1197 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 SSFA2P28290 1259 aa10.19□□□□□ -0.78
HNRNPC-211ENST00000554455 TTLL5Q6EMB2 1281 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms