RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 RDH13Q8NBN7 331 aa3.39□□□□□ -1.87
PRPF39-207ENST00000554439 BRPF3Q9ULD4 1205 aa3.39□□□□□ -1.87
PRPF39-207ENST00000554439 MAFBQ9Y5Q3 323 aaPredicted RBP3.39□□□□□ -1.87
PRPF39-207ENST00000554439 CC2D2AQ9P2K1 1620 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 USP46P62068 366 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 MTMR2Q13614 643 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 SND1Q7KZF4 910 aaKnown RBP eCLIP3.38□□□□□ -1.87
PRPF39-207ENST00000554439 AMOTL2Q9Y2J4 779 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 DNMBPQ6XZF7 1577 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 TBC1D9Q6ZT07 1266 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 BACH2Q9BYV9 841 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 VRTNQ9H8Y1 702 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 RCAN3Q9UKA8 241 aa3.38□□□□□ -1.87
PRPF39-207ENST00000554439 CCDC27Q2M243 656 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 GPAT2Q6NUI2 795 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 THOC2Q8NI27 1593 aaKnown RBP3.37□□□□□ -1.87
PRPF39-207ENST00000554439 DAPK1P53355 1430 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 TCERG1O14776 1098 aaKnown RBP3.37□□□□□ -1.87
PRPF39-207ENST00000554439 PER1O15534 1290 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-207ENST00000554439 NR6A1Q15406 480 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 CDCA8Q53HL2 280 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 PHLDB3Q6NSJ2 640 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 ZMIZ1Q9ULJ6 1067 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 GNEQ9Y223 722 aaKnown RBP3.37□□□□□ -1.87
PRPF39-207ENST00000554439 EPRSP07814 1512 aaKnown RBP3.37□□□□□ -1.87
PRPF39-207ENST00000554439 ABCC5O15440 1437 aa3.37□□□□□ -1.87
PRPF39-207ENST00000554439 ST20-MTHFSA0A0A6YYL1 179 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 UNCXA6NJT0 531 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SAMD7Q7Z3H4 446 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SLF2Q8IX21 1173 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 Q8N3U1 123 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 PZPP20742 1482 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 MIA2Q96PC5 1412 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 LRPPRCP42704 1394 aaKnown RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 WASHC2CQ9Y4E1 1318 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 GAPVD1Q14C86 1478 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 APLP1P51693 650 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 C20orf194Q5TEA3 1177 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 HELBQ8NG08 1087 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SYMPKQ92797 1274 aaKnown RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 CRBNQ96SW2 442 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 CARD11Q9BXL7 1154 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 KDM5CP41229 1560 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 LAMC3Q9Y6N6 1575 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 URB2Q14146 1524 aaKnown RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 MBD5Q9P267 1494 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 E9PSI1 815 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 CD2BP2O95400 341 aaKnown RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SOX11P35716 441 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SWT1Q5T5J6 900 aaKnown RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 FRAT1Q92837 279 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-207ENST00000554439 SLAIN2Q9P270 581 aa3.36□□□□□ -1.87
PRPF39-207ENST00000554439 MYBBP1AQ9BQG0 1328 aaKnown RBP3.35□□□□□ -1.87
PRPF39-207ENST00000554439 ATP9BO43861 1147 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 FUT2Q10981 343 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 ELOAQ14241 798 aaKnown RBP3.35□□□□□ -1.87
PRPF39-207ENST00000554439 NFKBIBQ15653 356 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 TSC1Q92574 1164 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 KIF15Q9NS87 1388 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 PIK3CDO00329 1044 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 MSTNO14793 375 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 NOM1Q5C9Z4 860 aaKnown RBP3.35□□□□□ -1.87
PRPF39-207ENST00000554439 CC2D1BQ5T0F9 858 aaKnown RBP3.35□□□□□ -1.87
PRPF39-207ENST00000554439 TMEM164Q5U3C3 297 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 TXNDC2Q86VQ3 553 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 STK32AQ8WU08 396 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 IGSF5Q9NSI5 407 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 USP35Q9P2H5 1018 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 ROCK1Q13464 1354 aa3.35□□□□□ -1.87
PRPF39-207ENST00000554439 PPM1GO15355 546 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-207ENST00000554439 EIF5BO60841 1220 aaKnown RBP3.34□□□□□ -1.87
PRPF39-207ENST00000554439 SEMA3FQ13275 785 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 DCAF11Q8TEB1 546 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 DNMT1P26358 1616 aaKnown RBP3.34□□□□□ -1.87
PRPF39-207ENST00000554439 BRD4O60885 1362 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-207ENST00000554439 KIAA1107Q9UPP5 1409 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 WDR62O43379 1518 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 KIF14Q15058 1648 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 C6orf229H3BNL8 230 aa3.34□□□□□ -1.87
PRPF39-207ENST00000554439 FRAT2O75474 233 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 RALBP1Q15311 655 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 DNAJC14Q6Y2X3 702 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 KIF21AQ7Z4S6 1674 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 FBXO45P0C2W1 286 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 FAM69CQ0P6D2 419 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 NLRP13Q86W25 1043 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 SNIP1Q8TAD8 396 aaKnown RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 CFDP1Q9UEE9 299 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 PRG4Q92954 1404 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 PDS5BQ9NTI5 1447 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 ARID4BQ4LE39 1312 aaPredicted RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 RALGAPBQ86X10 1494 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 ROCK2O75116 1388 aaKnown RBP3.33□□□□□ -1.88
PRPF39-207ENST00000554439 RGS3P49796 1198 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 NBPF1Q3BBV0 1214 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 C8orf34Q49A92 452 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 KIAA0586Q9BVV6 1533 aa3.33□□□□□ -1.88
PRPF39-207ENST00000554439 IQGAP2Q13576 1575 aa3.32□□□□□ -1.88
PRPF39-207ENST00000554439 CAMSAP2Q08AD1 1489 aa3.32□□□□□ -1.88
PRPF39-207ENST00000554439 NUP155O75694 1391 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms