RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 BCL11BQ9C0K0 894 aaPredicted RBP12.43□□□□□ -0.42
CFAP54-204ENST00000553778 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
CFAP54-204ENST00000553778 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 CAMTA1Q9Y6Y1 1673 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 HOXC9P31274 260 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
CFAP54-204ENST00000553778 CLEC17AQ6ZS10 378 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 SNX21Q969T3 373 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 PDLIM2Q96JY6 352 aa12.43□□□□□ -0.42
CFAP54-204ENST00000553778 ATRNO75882 1429 aa12.42□□□□□ -0.42
CFAP54-204ENST00000553778 SMC5Q8IY18 1101 aa12.42□□□□□ -0.42
CFAP54-204ENST00000553778 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
CFAP54-204ENST00000553778 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
CFAP54-204ENST00000553778 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
CFAP54-204ENST00000553778 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
CFAP54-204ENST00000553778 KIF24Q5T7B8 1368 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 HSCBQ8IWL3 235 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
CFAP54-204ENST00000553778 SPATA31A5Q5VU36 1347 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 SPATA31A7Q8IWB4 1347 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 WDR17Q8IZU2 1322 aa12.41□□□□□ -0.42
CFAP54-204ENST00000553778 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
CFAP54-204ENST00000553778 RTL1A6NKG5 1358 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 HSP90AB2PQ58FF8 381 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
CFAP54-204ENST00000553778 LTN1O94822 1766 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 ABCC6O95255 1503 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 FLT4P35916 1363 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 ANKRD26Q9UPS8 1709 aa12.4□□□□□ -0.42
CFAP54-204ENST00000553778 COL18A1P39060 1754 aa12.4□□□□□ -0.43
CFAP54-204ENST00000553778 RBM25P49756 843 aaKnown RBP12.39□□□□□ -0.43
CFAP54-204ENST00000553778 ZNF445P59923 1031 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 THRAP3Q9Y2W1 955 aaKnown RBP12.39□□□□□ -0.43
CFAP54-204ENST00000553778 ERBB3P21860 1342 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 SPATA31A1Q5TZJ5 1347 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 ZKSCAN5Q9Y2L8 839 aa12.39□□□□□ -0.43
CFAP54-204ENST00000553778 CRB1P82279 1406 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 KLHL40Q2TBA0 621 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 TCP11L2Q8N4U5 519 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
CFAP54-204ENST00000553778 A0A0G2JS52 829 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 MTHFSP49914 203 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
CFAP54-204ENST00000553778 CARD10Q9BWT7 1032 aa12.38□□□□□ -0.43
CFAP54-204ENST00000553778 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
CFAP54-204ENST00000553778 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
CFAP54-204ENST00000553778 HSP90AB1P08238 724 aaKnown RBP12.37□□□□□ -0.43
CFAP54-204ENST00000553778 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 GOLGA6L22H0YM25 854 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
CFAP54-204ENST00000553778 BARGINQ6ZT62 677 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
CFAP54-204ENST00000553778 ILDR2Q71H61 639 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 PRIMPOLQ96LW4 560 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
CFAP54-204ENST00000553778 E9PSI1 815 aa12.35□□□□□ -0.43
CFAP54-204ENST00000553778 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
CFAP54-204ENST00000553778 MYRIPQ8NFW9 859 aa12.35□□□□□ -0.43
CFAP54-204ENST00000553778 PPP2R1AP30153 589 aa12.34□□□□□ -0.43
CFAP54-204ENST00000553778 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
CFAP54-204ENST00000553778 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
CFAP54-204ENST00000553778 GLI3P10071 1580 aa12.34□□□□□ -0.43
CFAP54-204ENST00000553778 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
CFAP54-204ENST00000553778 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
CFAP54-204ENST00000553778 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
CFAP54-204ENST00000553778 CCDC39Q9UFE4 941 aa12.34□□□□□ -0.43
CFAP54-204ENST00000553778 EIF4A2Q14240 407 aaKnown RBP12.33□□□□□ -0.44
CFAP54-204ENST00000553778 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
CFAP54-204ENST00000553778 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
CFAP54-204ENST00000553778 PEAK1Q9H792 1746 aa12.33□□□□□ -0.44
CFAP54-204ENST00000553778 WDR43Q15061 677 aaKnown RBP eCLIP12.32□□□□□ -0.44
CFAP54-204ENST00000553778 IL2RBP14784 551 aa12.32□□□□□ -0.44
CFAP54-204ENST00000553778 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
CFAP54-204ENST00000553778 EXOC5O00471 708 aa12.31□□□□□ -0.44
CFAP54-204ENST00000553778 DIAPH1O60610 1272 aaKnown RBP12.31□□□□□ -0.44
CFAP54-204ENST00000553778 EYA1Q99502 592 aa12.31□□□□□ -0.44
CFAP54-204ENST00000553778 RWDD1Q9H446 243 aaPredicted RBP12.31□□□□□ -0.44
CFAP54-204ENST00000553778 PDZRN3Q9UPQ7 1066 aa12.31□□□□□ -0.44
CFAP54-204ENST00000553778 RGS12O14924 1447 aa12.31□□□□□ -0.44
CFAP54-204ENST00000553778 IL13P35225 146 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 DDB1Q16531 1140 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 KRT27Q7Z3Y8 459 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 USHBP1Q8N6Y0 703 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
CFAP54-204ENST00000553778 BCAR3O75815 825 aa12.29□□□□□ -0.44
CFAP54-204ENST00000553778 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
CFAP54-204ENST00000553778 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
CFAP54-204ENST00000553778 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms