RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 SPATA31C2B4DYI2 1134 aa7.31□□□□□ -1.24
LINC00648-201ENST00000553747 CLN3Q13286 438 aa7.31□□□□□ -1.24
LINC00648-201ENST00000553747 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
LINC00648-201ENST00000553747 LCE3BQ5TA77 95 aa7.3□□□□□ -1.24
LINC00648-201ENST00000553747 C1QTNF9BB2RNN3 333 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 FBXO45P0C2W1 286 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 HOXB4P17483 251 aaPredicted RBP7.29□□□□□ -1.24
LINC00648-201ENST00000553747 AMPD1P23109 780 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 RFC5P40937 340 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 CYP2U1Q7Z449 544 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 CFHR5Q9BXR6 569 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 OSBPL3Q9H4L5 887 aa7.29□□□□□ -1.24
LINC00648-201ENST00000553747 ZBBXA8MT70 800 aa7.28□□□□□ -1.24
LINC00648-201ENST00000553747 C2CD2LO14523 706 aa7.28□□□□□ -1.24
LINC00648-201ENST00000553747 ITGB7P26010 798 aa7.28□□□□□ -1.24
LINC00648-201ENST00000553747 RUBCNLQ9H714 662 aa7.28□□□□□ -1.24
LINC00648-201ENST00000553747 PCDHB11Q9Y5F2 797 aa7.28□□□□□ -1.24
LINC00648-201ENST00000553747 TMEM259Q4ZIN3 620 aa7.27□□□□□ -1.25
LINC00648-201ENST00000553747 WDR44Q5JSH3 913 aa7.27□□□□□ -1.25
LINC00648-201ENST00000553747 CD163Q86VB7 1156 aa7.27□□□□□ -1.25
LINC00648-201ENST00000553747 TRIM52Q96A61 297 aa7.27□□□□□ -1.25
LINC00648-201ENST00000553747 BMP4P12644 408 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 CHRNA4P43681 627 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 CENPCQ03188 943 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 UBAP2LQ14157 1087 aaKnown RBP7.26□□□□□ -1.25
LINC00648-201ENST00000553747 ABHD17AQ96GS6 310 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 GGA1Q9UJY5 639 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 GDF2Q9UK05 429 aaPredicted RBP7.26□□□□□ -1.25
LINC00648-201ENST00000553747 PHF24Q9UPV7 400 aa7.26□□□□□ -1.25
LINC00648-201ENST00000553747 TRAK2O60296 914 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 IL2RAP01589 272 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 CTBSQ01459 385 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 DOC2BQ14184 412 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 CNKSR1Q969H4 720 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 KRTAP4-12Q9BQ66 201 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 SEMA6BQ9H3T3 888 aa7.25□□□□□ -1.25
LINC00648-201ENST00000553747 ALYREFQ86V81 257 aaKnown RBP7.24□□□□□ -1.25
LINC00648-201ENST00000553747 RNF20Q5VTR2 975 aa7.23□□□□□ -1.25
LINC00648-201ENST00000553747 BTBD6Q96KE9 485 aa7.23□□□□□ -1.25
LINC00648-201ENST00000553747 ZSCAN10Q96SZ4 725 aaPredicted RBP7.23□□□□□ -1.25
LINC00648-201ENST00000553747 ESF1Q9H501 851 aaKnown RBP7.23□□□□□ -1.25
LINC00648-201ENST00000553747 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 GNB5O14775 395 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 BNIP3LO60238 219 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 MSX1P28360 303 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 C4orf17Q53FE4 359 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 ESYT1Q9BSJ8 1104 aa7.22□□□□□ -1.25
LINC00648-201ENST00000553747 NEURL1BA8MQ27 555 aa7.21□□□□□ -1.26
LINC00648-201ENST00000553747 CSB-PGBD3P0DP91 1061 aa7.21□□□□□ -1.26
LINC00648-201ENST00000553747 FGFR3P22607 806 aa7.21□□□□□ -1.26
LINC00648-201ENST00000553747 SLCO4C1Q6ZQN7 724 aa7.21□□□□□ -1.26
LINC00648-201ENST00000553747 PGBD3Q8N328 593 aa7.21□□□□□ -1.26
LINC00648-201ENST00000553747 STAU1O95793 577 aaKnown RBP7.2□□□□□ -1.26
LINC00648-201ENST00000553747 EPXP11678 715 aa7.2□□□□□ -1.26
LINC00648-201ENST00000553747 ZMYM1Q5SVZ6 1142 aa7.2□□□□□ -1.26
LINC00648-201ENST00000553747 TMEM214Q6NUQ4 689 aaKnown RBP7.2□□□□□ -1.26
LINC00648-201ENST00000553747 GJD4Q96KN9 370 aaPredicted RBP7.2□□□□□ -1.26
LINC00648-201ENST00000553747 CDCA7Q9BWT1 371 aaPredicted RBP7.2□□□□□ -1.26
LINC00648-201ENST00000553747 ATXN7L1Q9ULK2 861 aaPredicted RBP7.2□□□□□ -1.26
LINC00648-201ENST00000553747 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 GNRH1P01148 92 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 DGKGP49619 791 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 GNASQ5JWF2 1037 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 CCDC125Q86Z20 511 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 BANK1Q8NDB2 785 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 FHDC1Q9C0D6 1143 aaPredicted RBP7.19□□□□□ -1.26
LINC00648-201ENST00000553747 NDFIP2Q9NV92 336 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 HRH3Q9Y5N1 445 aa7.19□□□□□ -1.26
LINC00648-201ENST00000553747 EFHC2Q5JST6 749 aa7.18□□□□□ -1.26
LINC00648-201ENST00000553747 RNF135Q8IUD6 432 aa7.18□□□□□ -1.26
LINC00648-201ENST00000553747 XAGE2Q96GT9 111 aa7.18□□□□□ -1.26
LINC00648-201ENST00000553747 APBB1O00213 710 aa7.17□□□□□ -1.26
LINC00648-201ENST00000553747 GTF2E1P29083 439 aaPredicted RBP7.17□□□□□ -1.26
LINC00648-201ENST00000553747 NR1H3Q13133 447 aa7.17□□□□□ -1.26
LINC00648-201ENST00000553747 CCDC85AQ96PX6 553 aaPredicted RBP7.17□□□□□ -1.26
LINC00648-201ENST00000553747 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
LINC00648-201ENST00000553747 LBRQ14739 615 aaKnown RBP7.16□□□□□ -1.26
LINC00648-201ENST00000553747 CHSY3Q70JA7 882 aa7.16□□□□□ -1.26
LINC00648-201ENST00000553747 PIK3R2O00459 728 aa7.15□□□□□ -1.26
LINC00648-201ENST00000553747 FOXD4L6Q3SYB3 417 aaPredicted RBP7.15□□□□□ -1.26
LINC00648-201ENST00000553747 FOXD4L3Q6VB84 417 aaPredicted RBP7.15□□□□□ -1.26
LINC00648-201ENST00000553747 ZCCHC2Q9C0B9 1178 aaKnown RBP7.15□□□□□ -1.26
LINC00648-201ENST00000553747 NOP53Q9NZM5 478 aaKnown RBP7.15□□□□□ -1.26
LINC00648-201ENST00000553747 KLF15Q9UIH9 416 aa7.15□□□□□ -1.26
LINC00648-201ENST00000553747 HCN2Q9UL51 889 aa7.15□□□□□ -1.26
LINC00648-201ENST00000553747 SCO2A0A1W2PP80 73 aa7.14□□□□□ -1.27
LINC00648-201ENST00000553747 MYCP01106 439 aaPredicted RBP7.14□□□□□ -1.27
LINC00648-201ENST00000553747 ARAFP10398 606 aa7.14□□□□□ -1.27
LINC00648-201ENST00000553747 GATA4P43694 442 aa7.14□□□□□ -1.27
LINC00648-201ENST00000553747 PLA2G4AP47712 749 aa7.14□□□□□ -1.27
LINC00648-201ENST00000553747 TRIM11Q96F44 468 aa7.14□□□□□ -1.27
LINC00648-201ENST00000553747 DNAAF2Q9NVR5 837 aaKnown RBP7.14□□□□□ -1.27
LINC00648-201ENST00000553747 DCDC2BA2VCK2 349 aa7.13□□□□□ -1.27
LINC00648-201ENST00000553747 CD33P20138 364 aa7.13□□□□□ -1.27
LINC00648-201ENST00000553747 TSGA10IPQ3SY00 556 aa7.13□□□□□ -1.27
LINC00648-201ENST00000553747 FCHSD1Q86WN1 690 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms