RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 MAP7D1Q3KQU3 841 aa8.84□□□□□ -0.99
SCFD1-210ENST00000553693 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
SCFD1-210ENST00000553693 SLC27A3Q5K4L6 730 aa8.84□□□□□ -0.99
SCFD1-210ENST00000553693 POM121Q96HA1 1249 aa8.84□□□□□ -0.99
SCFD1-210ENST00000553693 CHIC2Q9UKJ5 165 aa8.84□□□□□ -0.99
SCFD1-210ENST00000553693 PRICKLE2Q7Z3G6 844 aa8.83□□□□□ -1
SCFD1-210ENST00000553693 ESCO1Q5FWF5 840 aa8.82□□□□□ -1
SCFD1-210ENST00000553693 BEND7Q8N7W2 519 aaPredicted RBP8.82□□□□□ -1
SCFD1-210ENST00000553693 ENAMQ9NRM1 1142 aa8.82□□□□□ -1
SCFD1-210ENST00000553693 RAB6BQ9NRW1 208 aa8.82□□□□□ -1
SCFD1-210ENST00000553693 SENP3-EIF4A1A0A087X0R7 540 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 FURINP09958 794 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 ESYT1Q9BSJ8 1104 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 KRTAP9-9Q9BYP9 154 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 KRTAP9-4Q9BYQ2 154 aa8.81□□□□□ -1
SCFD1-210ENST00000553693 RHOQP17081 205 aa8.8□□□□□ -1
SCFD1-210ENST00000553693 GTF2E1P29083 439 aaPredicted RBP8.8□□□□□ -1
SCFD1-210ENST00000553693 CNKSR1Q969H4 720 aa8.8□□□□□ -1
SCFD1-210ENST00000553693 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
SCFD1-210ENST00000553693 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 IL2RAP01589 272 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 WDR44Q5JSH3 913 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 NFATC2IPQ8NCF5 419 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 ALG2Q9H553 416 aa8.79□□□□□ -1
SCFD1-210ENST00000553693 NBPF10Q6P3W6 841 aaKnown RBP8.78□□□□□ -1
SCFD1-210ENST00000553693 TAS1R3Q7RTX0 852 aa8.78□□□□□ -1
SCFD1-210ENST00000553693 NBPF15Q8N660 670 aa8.78□□□□□ -1
SCFD1-210ENST00000553693 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
SCFD1-210ENST00000553693 KRBA1A5PL33 1030 aa8.77□□□□□ -1.01
SCFD1-210ENST00000553693 WASLO00401 505 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-210ENST00000553693 CENPCQ03188 943 aa8.77□□□□□ -1.01
SCFD1-210ENST00000553693 POU4F2Q12837 409 aa8.77□□□□□ -1.01
SCFD1-210ENST00000553693 XAGE2Q96GT9 111 aa8.77□□□□□ -1.01
SCFD1-210ENST00000553693 GMCL1Q96IK5 515 aa8.77□□□□□ -1.01
SCFD1-210ENST00000553693 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-210ENST00000553693 CUEDC1Q9NWM3 386 aaPredicted RBP8.77□□□□□ -1.01
SCFD1-210ENST00000553693 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-210ENST00000553693 GNASQ5JWF2 1037 aa8.76□□□□□ -1.01
SCFD1-210ENST00000553693 PODNQ7Z5L7 613 aa8.76□□□□□ -1.01
SCFD1-210ENST00000553693 HRH3Q9Y5N1 445 aa8.76□□□□□ -1.01
SCFD1-210ENST00000553693 PIK3CDO00329 1044 aa8.75□□□□□ -1.01
SCFD1-210ENST00000553693 SKIP12755 728 aa8.75□□□□□ -1.01
SCFD1-210ENST00000553693 EML3Q32P44 896 aa8.75□□□□□ -1.01
SCFD1-210ENST00000553693 ETNK1Q9HBU6 452 aa8.75□□□□□ -1.01
SCFD1-210ENST00000553693 H7C1W4 665 aa8.74□□□□□ -1.01
SCFD1-210ENST00000553693 TLR1Q15399 786 aa8.74□□□□□ -1.01
SCFD1-210ENST00000553693 TMEM214Q6NUQ4 689 aaKnown RBP8.74□□□□□ -1.01
SCFD1-210ENST00000553693 RIPOR1Q6ZS17 1223 aa8.74□□□□□ -1.01
SCFD1-210ENST00000553693 TRIM22Q8IYM9 498 aa8.74□□□□□ -1.01
SCFD1-210ENST00000553693 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-210ENST00000553693 TIMMDC1Q9NPL8 285 aa8.74□□□□□ -1.01
SCFD1-210ENST00000553693 POM121CA8CG34 1229 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 BCRP11274 1271 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 ITGB7P26010 798 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 GDF10P55107 478 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 FOXR1Q6PIV2 292 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 PROSER2Q86WR7 435 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-210ENST00000553693 GAS2L1Q99501 681 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-210ENST00000553693 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
SCFD1-210ENST00000553693 INHAP05111 366 aa8.72□□□□□ -1.01
SCFD1-210ENST00000553693 SCNN1DP51172 638 aa8.72□□□□□ -1.01
SCFD1-210ENST00000553693 NEDD1Q8NHV4 660 aa8.72□□□□□ -1.01
SCFD1-210ENST00000553693 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 A0A1B0GTH6 734 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 USP17L5A8MUK1 530 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 F11P03951 625 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 CLUAP1Q96AJ1 413 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 ZNF837Q96EG3 531 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-210ENST00000553693 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 IGF1RP08069 1367 aa8.71□□□□□ -1.02
SCFD1-210ENST00000553693 NCOA4Q13772 614 aa8.7□□□□□ -1.02
SCFD1-210ENST00000553693 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
SCFD1-210ENST00000553693 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
SCFD1-210ENST00000553693 ADAMTS19Q8TE59 1207 aa8.7□□□□□ -1.02
SCFD1-210ENST00000553693 ACDQ96AP0 544 aa8.7□□□□□ -1.02
SCFD1-210ENST00000553693 STAU1O95793 577 aaKnown RBP8.69□□□□□ -1.02
SCFD1-210ENST00000553693 GTF2IP78347 998 aa8.69□□□□□ -1.02
SCFD1-210ENST00000553693 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
SCFD1-210ENST00000553693 A6NJR5 290 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 PHKA2P46019 1235 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 PSME1Q06323 249 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 PLEKHM2Q8IWE5 1019 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 PCDHGA11Q9Y5H2 935 aa8.68□□□□□ -1.02
SCFD1-210ENST00000553693 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 SMTNP53814 917 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 SNRPNP63162 240 aaKnown RBP8.67□□□□□ -1.02
SCFD1-210ENST00000553693 DBN1Q16643 649 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 PGBD3Q8N328 593 aa8.67□□□□□ -1.02
SCFD1-210ENST00000553693 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-210ENST00000553693 NUCKS1Q9H1E3 243 aaKnown RBP8.67□□□□□ -1.02
SCFD1-210ENST00000553693 TMEM229AB2RXF0 380 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 433.4 ms