RNA–Protein interactions for RNA: ENST00000553410.1

AC107958.3-201, humanhuman

TSL 3 BASIC

Gene AC107958.3, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC107958.3-201ENST00000553410 A0A1B0GTH6 734 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 TRIM66O15016 1216 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 EPXP11678 715 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 HOXB4P17483 251 aaPredicted RBP4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 GTF2E1P29083 439 aaPredicted RBP4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 EFHC2Q5JST6 749 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 CC2D2BQ6DHV5 1058 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 GPAMQ9HCL2 828 aa4.94□□□□□ -1.62
AC107958.3-201ENST00000553410 SPATA31C1P0DKV0 1188 aa4.93□□□□□ -1.62
AC107958.3-201ENST00000553410 FGFR3P22607 806 aa4.93□□□□□ -1.62
AC107958.3-201ENST00000553410 RNF135Q8IUD6 432 aa4.93□□□□□ -1.62
AC107958.3-201ENST00000553410 BTBD6Q96KE9 485 aa4.93□□□□□ -1.62
AC107958.3-201ENST00000553410 AK7Q96M32 723 aa4.93□□□□□ -1.62
AC107958.3-201ENST00000553410 ARAFP10398 606 aa4.92□□□□□ -1.62
AC107958.3-201ENST00000553410 ERVK-9P63128 1117 aa4.92□□□□□ -1.62
AC107958.3-201ENST00000553410 RNF20Q5VTR2 975 aa4.92□□□□□ -1.62
AC107958.3-201ENST00000553410 GOLGA2P5Q9HBQ8 144 aa4.92□□□□□ -1.62
AC107958.3-201ENST00000553410 POLR3EQ9NVU0 708 aa4.92□□□□□ -1.62
AC107958.3-201ENST00000553410 SPDYE3A6NKU9 549 aa4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 THBS1P07996 1170 aa4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 GNASQ5JWF2 1037 aa4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 CHSY3Q70JA7 882 aa4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 ZC3H15Q8WU90 426 aaKnown RBP4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 ARHGEF10LQ9HCE6 1279 aa4.91□□□□□ -1.62
AC107958.3-201ENST00000553410 RSPO4Q2I0M5 234 aaPredicted RBP4.9□□□□□ -1.63
AC107958.3-201ENST00000553410 ABHD17AQ96GS6 310 aa4.9□□□□□ -1.63
AC107958.3-201ENST00000553410 KRTAP9-9Q9BYP9 154 aa4.9□□□□□ -1.63
AC107958.3-201ENST00000553410 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
AC107958.3-201ENST00000553410 NEURL1BA8MQ27 555 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 APBA3O96018 575 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 ADH6P28332 368 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 FOXD4L6Q3SYB3 417 aaPredicted RBP4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 PRRT3Q5FWE3 981 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 NKAPLQ5M9Q1 402 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 FIGNL1Q6PIW4 674 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 FOXD4L3Q6VB84 417 aaPredicted RBP4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 ZNF592Q92610 1267 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 RUBCNLQ9H714 662 aa4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 ATP1B4Q9UN42 357 aaPredicted RBP4.89□□□□□ -1.63
AC107958.3-201ENST00000553410 C2CD2LO14523 706 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 DYRK3O43781 588 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 GIGYF1O75420 1035 aaPredicted RBP4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 AP1G2O75843 785 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 PHKA2P46019 1235 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 PDE4DQ08499 809 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 UBAP2LQ14157 1087 aaKnown RBP4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 ZSCAN10Q96SZ4 725 aaPredicted RBP4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 PLVAPQ9BX97 442 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 PCDHB9Q9Y5E1 797 aa4.88□□□□□ -1.63
AC107958.3-201ENST00000553410 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 GNRH1P01148 92 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 CTBSQ01459 385 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 LRP8Q14114 963 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 TMEM214Q6NUQ4 689 aaKnown RBP4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 CNKSR1Q969H4 720 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 ESYT1Q9BSJ8 1104 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 AVENQ9NQS1 362 aaPredicted RBP4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 TPSG1Q9NRR2 321 aa4.87□□□□□ -1.63
AC107958.3-201ENST00000553410 ZBBXA8MT70 800 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 BNIP3LO60238 219 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 MCCD1P59942 119 aaPredicted RBP4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 CENPCQ03188 943 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 PRSS36Q5K4E3 855 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 EPS8L1Q8TE68 723 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 NACC1Q96RE7 527 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 RAB6BQ9NRW1 208 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 NDFIP2Q9NV92 336 aa4.86□□□□□ -1.63
AC107958.3-201ENST00000553410 TRAK2O60296 914 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 MSX1P28360 303 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 SCTRP47872 440 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 TRIM11Q96F44 468 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 CRISPLD1Q9H336 500 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 OSBPL3Q9H4L5 887 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 PCDHB11Q9Y5F2 797 aa4.85□□□□□ -1.63
AC107958.3-201ENST00000553410 COBLO75128 1261 aa4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 USP17L8P0C7I0 530 aa4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 SKIV2LQ15477 1246 aaKnown RBP4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 C4orf17Q53FE4 359 aa4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 VSIG10Q8N0Z9 540 aa4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 HMX1Q9NP08 348 aaPredicted RBP4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 PCDHGC4Q9Y5F7 938 aa4.84□□□□□ -1.63
AC107958.3-201ENST00000553410 MYCP01106 439 aaPredicted RBP4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 IL2RAP01589 272 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 ALAS2P22557 587 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 ESCO1Q5FWF5 840 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 FAM182BQ5T319 152 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 TBC1D9Q6ZT07 1266 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 RHBDD1Q8TEB9 315 aa4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 ZNF330Q9Y3S2 320 aaPredicted RBP4.83□□□□□ -1.64
AC107958.3-201ENST00000553410 NLRP8Q86W28 1048 aa4.82□□□□□ -1.64
AC107958.3-201ENST00000553410 FCHSD1Q86WN1 690 aa4.82□□□□□ -1.64
AC107958.3-201ENST00000553410 C1orf216Q8TAB5 229 aa4.82□□□□□ -1.64
AC107958.3-201ENST00000553410 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.82□□□□□ -1.64
AC107958.3-201ENST00000553410 PRR12Q9ULL5 1215 aa4.82□□□□□ -1.64
AC107958.3-201ENST00000553410 ATXN7O15265 892 aaPredicted RBP4.81□□□□□ -1.64
AC107958.3-201ENST00000553410 PAX4O43316 350 aa4.81□□□□□ -1.64
AC107958.3-201ENST00000553410 H2AFB1P0C5Y9 115 aa4.81□□□□□ -1.64
AC107958.3-201ENST00000553410 H2AFB2P0C5Z0 115 aa4.81□□□□□ -1.64
AC107958.3-201ENST00000553410 SH3D19Q5HYK7 790 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms