RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 GNPATO15228 680 aa22.52■■□□□ 1.2
XRCC3-204ENST00000553361 RBM42Q9BTD8 480 aaKnown RBP22.52■■□□□ 1.2
XRCC3-204ENST00000553361 IL13P35225 146 aa22.51■■□□□ 1.19
XRCC3-204ENST00000553361 MTHFSP49914 203 aa22.51■■□□□ 1.19
XRCC3-204ENST00000553361 CABP4P57796 275 aa22.51■■□□□ 1.19
XRCC3-204ENST00000553361 SSFA2P28290 1259 aa22.5■■□□□ 1.19
XRCC3-204ENST00000553361 C1orf141Q5JVX7 400 aa22.5■■□□□ 1.19
XRCC3-204ENST00000553361 PLEKHG2Q9H7P9 1386 aa22.5■■□□□ 1.19
XRCC3-204ENST00000553361 C5P01031 1676 aa22.49■■□□□ 1.19
XRCC3-204ENST00000553361 ITGB4P16144 1822 aa22.48■■□□□ 1.19
XRCC3-204ENST00000553361 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
XRCC3-204ENST00000553361 CC2D1BQ5T0F9 858 aaKnown RBP22.48■■□□□ 1.19
XRCC3-204ENST00000553361 SLC4A9Q96Q91 983 aa22.48■■□□□ 1.19
XRCC3-204ENST00000553361 CD2APQ9Y5K6 639 aa22.48■■□□□ 1.19
XRCC3-204ENST00000553361 YBX3P16989 372 aaKnown RBP eCLIP22.47■■□□□ 1.19
XRCC3-204ENST00000553361 C4BP0C0L5 1744 aa22.47■■□□□ 1.19
XRCC3-204ENST00000553361 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
XRCC3-204ENST00000553361 GRIN3BO60391 1043 aa22.45■■□□□ 1.18
XRCC3-204ENST00000553361 NFATC2IPQ8NCF5 419 aa22.45■■□□□ 1.18
XRCC3-204ENST00000553361 COL24A1Q17RW2 1714 aa22.45■■□□□ 1.18
XRCC3-204ENST00000553361 KDM6AO15550 1401 aaPredicted RBP22.44■■□□□ 1.18
XRCC3-204ENST00000553361 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
XRCC3-204ENST00000553361 RTCBQ9Y3I0 505 aaKnown RBP22.44■■□□□ 1.18
XRCC3-204ENST00000553361 PTCD1O75127 700 aaKnown RBP22.43■■□□□ 1.18
XRCC3-204ENST00000553361 HMOX1P09601 288 aa22.43■■□□□ 1.18
XRCC3-204ENST00000553361 KDRP35968 1356 aa22.41■■□□□ 1.18
XRCC3-204ENST00000553361 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
XRCC3-204ENST00000553361 RC3H1Q5TC82 1133 aaKnown RBP22.41■■□□□ 1.18
XRCC3-204ENST00000553361 WWC3Q9ULE0 1092 aa22.41■■□□□ 1.18
XRCC3-204ENST00000553361 DIAPH1O60610 1272 aaKnown RBP22.39■■□□□ 1.17
XRCC3-204ENST00000553361 MMP10P09238 476 aa22.39■■□□□ 1.17
XRCC3-204ENST00000553361 AKAP4Q5JQC9 854 aa22.39■■□□□ 1.17
XRCC3-204ENST00000553361 ARHGEF1Q92888 912 aaKnown RBP22.39■■□□□ 1.17
XRCC3-204ENST00000553361 LGR6Q9HBX8 967 aa22.38■■□□□ 1.17
XRCC3-204ENST00000553361 RPS6KA4O75676 772 aa22.37■■□□□ 1.17
XRCC3-204ENST00000553361 RFC4P35249 363 aa22.37■■□□□ 1.17
XRCC3-204ENST00000553361 CNTNAP4Q9C0A0 1308 aa22.36■■□□□ 1.17
XRCC3-204ENST00000553361 NLGN1Q8N2Q7 840 aa22.36■■□□□ 1.17
XRCC3-204ENST00000553361 ADRA2BP18089 450 aa22.35■■□□□ 1.17
XRCC3-204ENST00000553361 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
XRCC3-204ENST00000553361 RNMTO43148 476 aaKnown RBP22.34■■□□□ 1.17
XRCC3-204ENST00000553361 MTHFSDQ2M296 383 aaKnown RBP22.34■■□□□ 1.17
XRCC3-204ENST00000553361 SLC52A2Q9HAB3 445 aa22.34■■□□□ 1.17
XRCC3-204ENST00000553361 CRKLP46109 303 aaKnown RBP22.33■■□□□ 1.17
XRCC3-204ENST00000553361 U2SURPO15042 1029 aaKnown RBP22.32■■□□□ 1.16
XRCC3-204ENST00000553361 GYS1P13807 737 aa22.32■■□□□ 1.16
XRCC3-204ENST00000553361 SLC39A6Q13433 755 aa22.32■■□□□ 1.16
XRCC3-204ENST00000553361 CHD4Q14839 1912 aa22.31■■□□□ 1.16
XRCC3-204ENST00000553361 DNAJC10Q8IXB1 793 aa22.3■■□□□ 1.16
XRCC3-204ENST00000553361 C1QTNF8P60827 252 aa22.29■■□□□ 1.16
XRCC3-204ENST00000553361 SRP68Q9UHB9 627 aaKnown RBP22.29■■□□□ 1.16
XRCC3-204ENST00000553361 PARP3Q9Y6F1 533 aa22.29■■□□□ 1.16
XRCC3-204ENST00000553361 NPC1L1Q9UHC9 1359 aa22.28■■□□□ 1.16
XRCC3-204ENST00000553361 GIGYF1O75420 1035 aaPredicted RBP22.28■■□□□ 1.16
XRCC3-204ENST00000553361 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
XRCC3-204ENST00000553361 A0A0G2JLW4 131 aa22.27■■□□□ 1.16
XRCC3-204ENST00000553361 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
XRCC3-204ENST00000553361 TGFB2P61812 414 aa22.26■■□□□ 1.15
XRCC3-204ENST00000553361 FKBP8Q14318 412 aa22.26■■□□□ 1.15
XRCC3-204ENST00000553361 CYP19A1P11511 503 aaPredicted RBP22.23■■□□□ 1.15
XRCC3-204ENST00000553361 BCS1LQ9Y276 419 aa22.23■■□□□ 1.15
XRCC3-204ENST00000553361 USP42Q9H9J4 1324 aaKnown RBP22.23■■□□□ 1.15
XRCC3-204ENST00000553361 SENP3-EIF4A1A0A087X0R7 540 aa22.22■■□□□ 1.15
XRCC3-204ENST00000553361 ZPR1O75312 459 aa22.22■■□□□ 1.15
XRCC3-204ENST00000553361 DPEP1P16444 411 aa22.22■■□□□ 1.15
XRCC3-204ENST00000553361 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
XRCC3-204ENST00000553361 ATP10DQ9P241 1426 aa22.22■■□□□ 1.15
XRCC3-204ENST00000553361 ZNF831Q5JPB2 1677 aa22.21■■□□□ 1.15
XRCC3-204ENST00000553361 GAS2L2Q8NHY3 880 aa22.21■■□□□ 1.15
XRCC3-204ENST00000553361 CFAP53Q96M91 514 aa22.21■■□□□ 1.15
XRCC3-204ENST00000553361 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.15
XRCC3-204ENST00000553361 GNAT3A8MTJ3 354 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 DDR1Q08345 913 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 USPL1Q5W0Q7 1092 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 TTC5Q8N0Z6 440 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 IL17REQ8NFR9 667 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
XRCC3-204ENST00000553361 TEFQ10587 303 aa22.19■■□□□ 1.14
XRCC3-204ENST00000553361 GPBP1L1Q9HC44 474 aaPredicted RBP22.19■■□□□ 1.14
XRCC3-204ENST00000553361 ZBTB1Q9Y2K1 713 aa22.19■■□□□ 1.14
XRCC3-204ENST00000553361 SOS1Q07889 1333 aaPredicted RBP22.19■■□□□ 1.14
XRCC3-204ENST00000553361 C10orf71Q711Q0 1435 aa22.19■■□□□ 1.14
XRCC3-204ENST00000553361 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
XRCC3-204ENST00000553361 MYH14Q7Z406 1995 aaKnown RBP22.19■■□□□ 1.14
XRCC3-204ENST00000553361 COL5A3P25940 1745 aaPredicted RBP22.18■■□□□ 1.14
XRCC3-204ENST00000553361 FCHSD2O94868 740 aa22.18■■□□□ 1.14
XRCC3-204ENST00000553361 VSIG10Q8N0Z9 540 aa22.18■■□□□ 1.14
XRCC3-204ENST00000553361 PHACTR3Q96KR7 559 aa22.18■■□□□ 1.14
XRCC3-204ENST00000553361 CANXP27824 592 aaKnown RBP22.17■■□□□ 1.14
XRCC3-204ENST00000553361 TM4SF1P30408 202 aa22.17■■□□□ 1.14
XRCC3-204ENST00000553361 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
XRCC3-204ENST00000553361 ARHGAP27Q6ZUM4 889 aa22.17■■□□□ 1.14
XRCC3-204ENST00000553361 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
XRCC3-204ENST00000553361 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
XRCC3-204ENST00000553361 MRC1P22897 1456 aa22.16■■□□□ 1.14
XRCC3-204ENST00000553361 STARD3NLO95772 234 aa22.16■■□□□ 1.14
XRCC3-204ENST00000553361 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
XRCC3-204ENST00000553361 U2AF1L5P0DN76 240 aaPredicted RBP22.15■■□□□ 1.14
XRCC3-204ENST00000553361 KCNA3P22001 575 aa22.15■■□□□ 1.14
XRCC3-204ENST00000553361 U2AF1Q01081 240 aaKnown RBP eCLIP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms