RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 CHMLP26374 656 aa13.9□□□□□ -0.18
PPFIA2-227ENST00000552948 FOXO3O43524 673 aa13.9□□□□□ -0.18
PPFIA2-227ENST00000552948 MYRIPQ8NFW9 859 aa13.9□□□□□ -0.18
PPFIA2-227ENST00000552948 FGD1P98174 961 aa13.9□□□□□ -0.19
PPFIA2-227ENST00000552948 TRIM5Q9C035 493 aa13.9□□□□□ -0.19
PPFIA2-227ENST00000552948 STX6O43752 255 aa13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 CASTP20810 708 aaKnown RBP13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 NUDT16Q96DE0 195 aaKnown RBP13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 ZFYVE16Q7Z3T8 1539 aa13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 CKAP2LQ8IYA6 745 aa13.89□□□□□ -0.19
PPFIA2-227ENST00000552948 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 SMAP1Q8IYB5 467 aaPredicted RBP13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 PIBF1Q8WXW3 757 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 PTPRCP08575 1304 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 DNM1Q05193 864 aaKnown RBP13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 C16orf45Q96MC5 204 aaPredicted RBP13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 JAKMIP1Q96N16 626 aaKnown RBP13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 TET3O43151 1660 aa13.88□□□□□ -0.19
PPFIA2-227ENST00000552948 RIMS2Q9UQ26 1411 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 CCDC192P0DO97 292 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 ZSCAN22P10073 491 aaPredicted RBP13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 FOSBP53539 338 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 UNC5CLQ8IV45 518 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 NPHP1O15259 732 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 PTCH1Q13635 1447 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 UBE2HP62256 183 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 SHPRHQ149N8 1683 aa13.87□□□□□ -0.19
PPFIA2-227ENST00000552948 UVSSAQ2YD98 709 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 INTS4Q96HW7 963 aaKnown RBP13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 SYT1P21579 422 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 EIF4A2Q14240 407 aaKnown RBP13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 NUTM2GQ5VZR2 741 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 CNTROBQ8N137 903 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 KDM4AO75164 1064 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 FLIIQ13045 1269 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 STK3Q13188 491 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 NECAB1Q8N987 351 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 KIF1BO60333 1816 aa13.86□□□□□ -0.19
PPFIA2-227ENST00000552948 GJB2P29033 226 aa13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 AK2P54819 239 aa13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 CCDC30Q5VVM6 783 aa13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 LARP1BQ659C4 914 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 TFIP11Q9UBB9 837 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 ZKSCAN1P17029 563 aaPredicted RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 CEBPZQ03701 1054 aaKnown RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 TPD52L1Q16890 204 aaPredicted RBP13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 FAM173BQ6P4H8 233 aa13.85□□□□□ -0.19
PPFIA2-227ENST00000552948 U2AF2P26368 475 aaKnown RBP eCLIP13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 TCEANC2Q96MN5 208 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 PDRG1Q9NUG6 133 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 CHL1O00533 1208 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 ANAPC15P60006 121 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 TNMDQ9H2S6 317 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 ZFYVE9O95405 1425 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
PPFIA2-227ENST00000552948 SHROOM2Q13796 1616 aa13.83□□□□□ -0.19
PPFIA2-227ENST00000552948 PTGS1P23219 599 aa13.83□□□□□ -0.19
PPFIA2-227ENST00000552948 NUP62CLQ9H1M0 184 aa13.83□□□□□ -0.19
PPFIA2-227ENST00000552948 QRICH2Q9H0J4 1663 aa13.83□□□□□ -0.19
PPFIA2-227ENST00000552948 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 F13A1P00488 732 aa13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 CUL4AQ13619 759 aa13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 ZRSR1Q15695 479 aaKnown RBP13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 CCDC186Q7Z3E2 898 aa13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 CCDC9Q9Y3X0 531 aaKnown RBP13.83□□□□□ -0.2
PPFIA2-227ENST00000552948 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 PYCARDQ9ULZ3 195 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 CYP46A1Q9Y6A2 500 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 KRT85P78386 507 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 PPP1R42Q7Z4L9 355 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 LUZP1Q86V48 1076 aa13.82□□□□□ -0.2
PPFIA2-227ENST00000552948 BECN2A8MW95 431 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 ATP8B2P98198 1209 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 CDK11BP21127 795 aaKnown RBP13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 MED14O60244 1454 aa13.81□□□□□ -0.2
PPFIA2-227ENST00000552948 H3BQV1 296 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms