RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 MSL1Q68DK7 614 aa11.98□□□□□ -0.49
TMEM116-217ENST00000552801 C5P01031 1676 aa11.98□□□□□ -0.49
TMEM116-217ENST00000552801 SENP3-EIF4A1A0A087X0R7 540 aa11.97□□□□□ -0.49
TMEM116-217ENST00000552801 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-217ENST00000552801 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-217ENST00000552801 ZBTB47Q9UFB7 747 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-217ENST00000552801 NSD2O96028 1365 aa11.97□□□□□ -0.49
TMEM116-217ENST00000552801 GIGYF1O75420 1035 aaPredicted RBP11.96□□□□□ -0.49
TMEM116-217ENST00000552801 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
TMEM116-217ENST00000552801 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
TMEM116-217ENST00000552801 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
TMEM116-217ENST00000552801 HAX1O00165 279 aa11.95□□□□□ -0.5
TMEM116-217ENST00000552801 PHF14O94880 888 aa11.95□□□□□ -0.5
TMEM116-217ENST00000552801 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
TMEM116-217ENST00000552801 MAP2P11137 1827 aaKnown RBP11.95□□□□□ -0.5
TMEM116-217ENST00000552801 TNNT2P45379 298 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-217ENST00000552801 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-217ENST00000552801 ITGB4P16144 1822 aa11.94□□□□□ -0.5
TMEM116-217ENST00000552801 CYP27B1O15528 508 aa11.93□□□□□ -0.5
TMEM116-217ENST00000552801 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
TMEM116-217ENST00000552801 CD2APQ9Y5K6 639 aa11.93□□□□□ -0.5
TMEM116-217ENST00000552801 TAF1LQ8IZX4 1826 aa11.93□□□□□ -0.5
TMEM116-217ENST00000552801 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
TMEM116-217ENST00000552801 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 C4BP0C0L5 1744 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 PIGBQ92521 554 aa11.92□□□□□ -0.5
TMEM116-217ENST00000552801 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
TMEM116-217ENST00000552801 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
TMEM116-217ENST00000552801 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
TMEM116-217ENST00000552801 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
TMEM116-217ENST00000552801 SIK1P57059 783 aa11.91□□□□□ -0.5
TMEM116-217ENST00000552801 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM116-217ENST00000552801 EYA1Q99502 592 aa11.91□□□□□ -0.5
TMEM116-217ENST00000552801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM116-217ENST00000552801 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
TMEM116-217ENST00000552801 GNPATO15228 680 aa11.9□□□□□ -0.5
TMEM116-217ENST00000552801 SSFA2P28290 1259 aa11.9□□□□□ -0.5
TMEM116-217ENST00000552801 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-217ENST00000552801 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
TMEM116-217ENST00000552801 YBX3P16989 372 aaKnown RBP eCLIP11.89□□□□□ -0.516e-6■□□□□ 10.9
TMEM116-217ENST00000552801 PLEKHO1Q53GL0 409 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-217ENST00000552801 POLKQ9UBT6 870 aa11.89□□□□□ -0.51
TMEM116-217ENST00000552801 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
TMEM116-217ENST00000552801 PHKG2P15735 406 aa11.88□□□□□ -0.51
TMEM116-217ENST00000552801 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
TMEM116-217ENST00000552801 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-217ENST00000552801 CABP4P57796 275 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
TMEM116-217ENST00000552801 MORC1Q86VD1 984 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 IFNLR1Q8IU57 520 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-217ENST00000552801 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 ASAP1Q9ULH1 1129 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 RTCBQ9Y3I0 505 aaKnown RBP11.87□□□□□ -0.51
TMEM116-217ENST00000552801 IGSF1Q8N6C5 1336 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 UBR3Q6ZT12 1888 aa11.87□□□□□ -0.51
TMEM116-217ENST00000552801 AMOTQ4VCS5 1084 aa11.86□□□□□ -0.51
TMEM116-217ENST00000552801 TRAPPC3LQ5T215 181 aa11.86□□□□□ -0.51
TMEM116-217ENST00000552801 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-217ENST00000552801 LINC00116Q8NCU8 138 aa11.86□□□□□ -0.51
TMEM116-217ENST00000552801 CCER1Q8TC90 406 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-217ENST00000552801 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-217ENST00000552801 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 ERVV-2B6SEH9 535 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 RFC4P35249 363 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 PANK3Q9H999 370 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 NCAPD2Q15021 1401 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
TMEM116-217ENST00000552801 MMP10P09238 476 aa11.84□□□□□ -0.51
TMEM116-217ENST00000552801 MTHFSP49914 203 aa11.84□□□□□ -0.51
TMEM116-217ENST00000552801 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
TMEM116-217ENST00000552801 PLEKHG2Q9H7P9 1386 aa11.84□□□□□ -0.51
TMEM116-217ENST00000552801 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
TMEM116-217ENST00000552801 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
TMEM116-217ENST00000552801 SMIM5Q71RC9 77 aa11.83□□□□□ -0.52
TMEM116-217ENST00000552801 NLGN1Q8N2Q7 840 aa11.83□□□□□ -0.52
TMEM116-217ENST00000552801 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
TMEM116-217ENST00000552801 ITPK1Q13572 414 aa11.82□□□□□ -0.52
TMEM116-217ENST00000552801 PARP3Q9Y6F1 533 aa11.82□□□□□ -0.52
TMEM116-217ENST00000552801 UTRNP46939 3433 aa11.81□□□□□ -0.52
TMEM116-217ENST00000552801 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
TMEM116-217ENST00000552801 AMIGO3Q86WK7 504 aa11.8□□□□□ -0.52
TMEM116-217ENST00000552801 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
TMEM116-217ENST00000552801 TGFB2P61812 414 aa11.79□□□□□ -0.52
TMEM116-217ENST00000552801 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
TMEM116-217ENST00000552801 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
TMEM116-217ENST00000552801 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
TMEM116-217ENST00000552801 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
TMEM116-217ENST00000552801 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
TMEM116-217ENST00000552801 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
TMEM116-217ENST00000552801 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
TMEM116-217ENST00000552801 FCHSD2O94868 740 aa11.78□□□□□ -0.52
TMEM116-217ENST00000552801 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
TMEM116-217ENST00000552801 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
TMEM116-217ENST00000552801 A0A0G2JLW4 131 aa11.77□□□□□ -0.53
TMEM116-217ENST00000552801 ZPR1O75312 459 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms