RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 FLT4P35916 1363 aa21.45■■□□□ 1.02
CACNB3-220ENST00000551716 PLEKHG2Q9H7P9 1386 aa21.45■■□□□ 1.02
CACNB3-220ENST00000551716 C9orf131Q5VYM1 1079 aa21.44■■□□□ 1.02
CACNB3-220ENST00000551716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.44■■□□□ 1.02
CACNB3-220ENST00000551716 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
CACNB3-220ENST00000551716 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
CACNB3-220ENST00000551716 CAPN15O75808 1086 aa21.43■■□□□ 1.02
CACNB3-220ENST00000551716 ADRA2BP18089 450 aa21.43■■□□□ 1.02
CACNB3-220ENST00000551716 DPEP1P16444 411 aa21.42■■□□□ 1.02
CACNB3-220ENST00000551716 ITPK1Q13572 414 aa21.42■■□□□ 1.02
CACNB3-220ENST00000551716 TESK2Q96S53 571 aa21.42■■□□□ 1.02
CACNB3-220ENST00000551716 ASAP1Q9ULH1 1129 aa21.42■■□□□ 1.02
CACNB3-220ENST00000551716 TOGARAM1Q9Y4F4 1720 aa21.41■■□□□ 1.02
CACNB3-220ENST00000551716 PARP3Q9Y6F1 533 aa21.41■■□□□ 1.02
CACNB3-220ENST00000551716 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
CACNB3-220ENST00000551716 PIM2Q9P1W9 311 aa21.4■■□□□ 1.02
CACNB3-220ENST00000551716 ST20-MTHFSA0A0A6YYL1 179 aa21.39■■□□□ 1.01
CACNB3-220ENST00000551716 HTRA3P83110 453 aa21.39■■□□□ 1.01
CACNB3-220ENST00000551716 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
CACNB3-220ENST00000551716 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
CACNB3-220ENST00000551716 RFC4P35249 363 aa21.38■■□□□ 1.01
CACNB3-220ENST00000551716 SMC1BQ8NDV3 1235 aa21.38■■□□□ 1.01
CACNB3-220ENST00000551716 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
CACNB3-220ENST00000551716 DALRD3Q5D0E6 543 aaKnown RBP21.37■■□□□ 1.01
CACNB3-220ENST00000551716 ARHGEF1Q92888 912 aaKnown RBP21.37■■□□□ 1.01
CACNB3-220ENST00000551716 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
CACNB3-220ENST00000551716 ATG3Q9NT62 314 aa21.37■■□□□ 1.01
CACNB3-220ENST00000551716 ITGB4P16144 1822 aa21.35■■□□□ 1.01
CACNB3-220ENST00000551716 GYS1P13807 737 aa21.35■■□□□ 1.01
CACNB3-220ENST00000551716 KCNA3P22001 575 aa21.35■■□□□ 1.01
CACNB3-220ENST00000551716 DCAF5Q96JK2 942 aa21.35■■□□□ 1.01
CACNB3-220ENST00000551716 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
CACNB3-220ENST00000551716 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
CACNB3-220ENST00000551716 PHKG2P15735 406 aa21.34■■□□□ 1.01
CACNB3-220ENST00000551716 RNF181Q9P0P0 153 aa21.34■■□□□ 1.01
CACNB3-220ENST00000551716 MAP2P11137 1827 aaKnown RBP21.34■■□□□ 1.01
CACNB3-220ENST00000551716 TONSLQ96HA7 1378 aa21.33■■□□□ 1
CACNB3-220ENST00000551716 ERVV-2B6SEH9 535 aa21.32■■□□□ 1
CACNB3-220ENST00000551716 CNTNAP4Q9C0A0 1308 aa21.31■■□□□ 1
CACNB3-220ENST00000551716 NCAPD2Q15021 1401 aa21.31■■□□□ 1
CACNB3-220ENST00000551716 CDCA8Q53HL2 280 aa21.31■■□□□ 1
CACNB3-220ENST00000551716 RBM42Q9BTD8 480 aaKnown RBP21.31■■□□□ 1
CACNB3-220ENST00000551716 WASHC2AQ641Q2 1341 aa21.3■■□□□ 1
CACNB3-220ENST00000551716 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
CACNB3-220ENST00000551716 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
CACNB3-220ENST00000551716 EYA1Q99502 592 aa21.3■■□□□ 1
CACNB3-220ENST00000551716 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
CACNB3-220ENST00000551716 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
CACNB3-220ENST00000551716 KCPQ6ZWJ8 1503 aa21.29■■□□□ 1
CACNB3-220ENST00000551716 PKD1L3Q7Z443 1732 aa21.29■■□□□ 1
CACNB3-220ENST00000551716 HSP90AB1P08238 724 aaKnown RBP21.29■■□□□ 1
CACNB3-220ENST00000551716 VEGFAP15692 232 aaPredicted RBP21.28■■□□□ 1
CACNB3-220ENST00000551716 KIAA1551Q9HCM1 1747 aa21.28■■□□□ 1
CACNB3-220ENST00000551716 KDRP35968 1356 aa21.27■■□□□ 1
CACNB3-220ENST00000551716 HSPA1AP0DMV8 641 aaKnown RBP21.26■□□□□ 0.99
CACNB3-220ENST00000551716 HSPA1BP0DMV9 641 aaKnown RBP21.26■□□□□ 0.99
CACNB3-220ENST00000551716 SLC4A9Q96Q91 983 aa21.26■□□□□ 0.99
CACNB3-220ENST00000551716 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
CACNB3-220ENST00000551716 PCNTO95613 3336 aa21.26■□□□□ 0.99
CACNB3-220ENST00000551716 GLTPD2A6NH11 291 aa21.22■□□□□ 0.99
CACNB3-220ENST00000551716 LMNB1P20700 586 aa21.22■□□□□ 0.99
CACNB3-220ENST00000551716 CABP4P57796 275 aa21.22■□□□□ 0.99
CACNB3-220ENST00000551716 ARFGEF1Q9Y6D6 1849 aa21.22■□□□□ 0.99
CACNB3-220ENST00000551716 CHRNA5P30532 468 aa21.21■□□□□ 0.99
CACNB3-220ENST00000551716 FKBP8Q14318 412 aa21.21■□□□□ 0.99
CACNB3-220ENST00000551716 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
CACNB3-220ENST00000551716 CARD14Q9BXL6 1004 aa21.2■□□□□ 0.98
CACNB3-220ENST00000551716 ZNF831Q5JPB2 1677 aa21.2■□□□□ 0.98
CACNB3-220ENST00000551716 USP42Q9H9J4 1324 aaKnown RBP21.2■□□□□ 0.98
CACNB3-220ENST00000551716 BRCA1P38398 1863 aaKnown RBP21.2■□□□□ 0.98
CACNB3-220ENST00000551716 CRKLP46109 303 aaKnown RBP21.19■□□□□ 0.98
CACNB3-220ENST00000551716 DDR1Q08345 913 aa21.19■□□□□ 0.98
CACNB3-220ENST00000551716 TNRC6CQ9HCJ0 1690 aaKnown RBP21.18■□□□□ 0.98
CACNB3-220ENST00000551716 TM4SF1P30408 202 aa21.18■□□□□ 0.98
CACNB3-220ENST00000551716 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
CACNB3-220ENST00000551716 SRP68Q9UHB9 627 aaKnown RBP21.18■□□□□ 0.98
CACNB3-220ENST00000551716 ZPR1O75312 459 aa21.17■□□□□ 0.98
CACNB3-220ENST00000551716 DPY19L2Q6NUT2 758 aa21.17■□□□□ 0.98
CACNB3-220ENST00000551716 POLKQ9UBT6 870 aa21.17■□□□□ 0.98
CACNB3-220ENST00000551716 POLRMTO00411 1230 aaKnown RBP21.16■□□□□ 0.98
CACNB3-220ENST00000551716 PTCD1O75127 700 aaKnown RBP21.16■□□□□ 0.98
CACNB3-220ENST00000551716 KDM6AO15550 1401 aaPredicted RBP21.15■□□□□ 0.98
CACNB3-220ENST00000551716 MTHFSP49914 203 aa21.15■□□□□ 0.98
CACNB3-220ENST00000551716 KIF20BQ96Q89 1820 aa21.14■□□□□ 0.97
CACNB3-220ENST00000551716 EIF4A2Q14240 407 aaKnown RBP21.14■□□□□ 0.97
CACNB3-220ENST00000551716 TTLL6Q8N841 843 aa21.14■□□□□ 0.97
CACNB3-220ENST00000551716 RASSF7Q02833 373 aa21.13■□□□□ 0.97
CACNB3-220ENST00000551716 ZNF530Q6P9A1 599 aaPredicted RBP21.12■□□□□ 0.97
CACNB3-220ENST00000551716 CREBZFQ9NS37 354 aa21.12■□□□□ 0.97
CACNB3-220ENST00000551716 C1orf141Q5JVX7 400 aa21.11■□□□□ 0.97
CACNB3-220ENST00000551716 INTS5Q6P9B9 1019 aaKnown RBP21.11■□□□□ 0.97
CACNB3-220ENST00000551716 NFATC2IPQ8NCF5 419 aa21.11■□□□□ 0.97
CACNB3-220ENST00000551716 COL5A3P25940 1745 aaPredicted RBP21.09■□□□□ 0.97
CACNB3-220ENST00000551716 SBF1O95248 1867 aa21.09■□□□□ 0.97
CACNB3-220ENST00000551716 H0YIN7 160 aa21.09■□□□□ 0.97
CACNB3-220ENST00000551716 PRDM10Q9NQV6 1147 aa21.09■□□□□ 0.97
CACNB3-220ENST00000551716 USPL1Q5W0Q7 1092 aa21.08■□□□□ 0.97
CACNB3-220ENST00000551716 MYH14Q7Z406 1995 aaKnown RBP21.07■□□□□ 0.96
CACNB3-220ENST00000551716 NARFQ9UHQ1 456 aa21.07■□□□□ 0.96
CACNB3-220ENST00000551716 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms