RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 GNB5O14775 395 aa7.71□□□□□ -1.18
TSPAN8-205ENST00000550818 CLN3Q13286 438 aa7.71□□□□□ -1.18
TSPAN8-205ENST00000550818 UBAP2LQ14157 1087 aaKnown RBP7.71□□□□□ -1.18
TSPAN8-205ENST00000550818 GOLGA6L1Q8N7Z2 621 aa7.71□□□□□ -1.18
TSPAN8-205ENST00000550818 NLRP3Q96P20 1036 aa7.71□□□□□ -1.18
TSPAN8-205ENST00000550818 C2CD2LO14523 706 aa7.7□□□□□ -1.18
TSPAN8-205ENST00000550818 DOC2BQ14184 412 aa7.7□□□□□ -1.18
TSPAN8-205ENST00000550818 WASLO00401 505 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 GIGYF1O75420 1035 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 AMPD1P23109 780 aa7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 ERVK-9P63128 1117 aa7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 SKIV2LQ15477 1246 aaKnown RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 TAS1R3Q7RTX0 852 aa7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 HMX1Q9NP08 348 aaPredicted RBP7.69□□□□□ -1.18
TSPAN8-205ENST00000550818 SLCO4C1Q6ZQN7 724 aa7.68□□□□□ -1.18
TSPAN8-205ENST00000550818 BTBD6Q96KE9 485 aa7.68□□□□□ -1.18
TSPAN8-205ENST00000550818 GPAMQ9HCL2 828 aa7.68□□□□□ -1.18
TSPAN8-205ENST00000550818 GGA1Q9UJY5 639 aa7.68□□□□□ -1.18
TSPAN8-205ENST00000550818 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
TSPAN8-205ENST00000550818 DGKGP49619 791 aa7.67□□□□□ -1.18
TSPAN8-205ENST00000550818 CC2D2BQ6DHV5 1058 aa7.67□□□□□ -1.18
TSPAN8-205ENST00000550818 KRTAP9-9Q9BYP9 154 aa7.67□□□□□ -1.18
TSPAN8-205ENST00000550818 KRTAP9-4Q9BYQ2 154 aa7.67□□□□□ -1.18
TSPAN8-205ENST00000550818 PIK3R2O00459 728 aa7.66□□□□□ -1.18
TSPAN8-205ENST00000550818 AP1G2O75843 785 aa7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 EPXP11678 715 aa7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 BMP4P12644 408 aa7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 SCTRP47872 440 aa7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 PNMA1Q8ND90 353 aa7.65□□□□□ -1.18
TSPAN8-205ENST00000550818 CTBSQ01459 385 aa7.64□□□□□ -1.19
TSPAN8-205ENST00000550818 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.64□□□□□ -1.19
TSPAN8-205ENST00000550818 ARHGEF10LQ9HCE6 1279 aa7.64□□□□□ -1.19
TSPAN8-205ENST00000550818 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
TSPAN8-205ENST00000550818 FLIIQ13045 1269 aa7.63□□□□□ -1.19
TSPAN8-205ENST00000550818 CYP2U1Q7Z449 544 aa7.63□□□□□ -1.19
TSPAN8-205ENST00000550818 ABHD17AQ96GS6 310 aa7.63□□□□□ -1.19
TSPAN8-205ENST00000550818 NDFIP2Q9NV92 336 aa7.63□□□□□ -1.19
TSPAN8-205ENST00000550818 ATXN7L1Q9ULK2 861 aaPredicted RBP7.63□□□□□ -1.19
TSPAN8-205ENST00000550818 A0A1B0GTH6 734 aa7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 TRAK2O60296 914 aa7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 PHKA2P46019 1235 aa7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 LBRQ14739 615 aaKnown RBP7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 ZMYND15Q9H091 742 aa7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 OSBPL3Q9H4L5 887 aa7.62□□□□□ -1.19
TSPAN8-205ENST00000550818 FGFR3P22607 806 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 GATA4P43694 442 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 RSPO4Q2I0M5 234 aaPredicted RBP7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 CCDC125Q86Z20 511 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 RUBCNLQ9H714 662 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 ATP1B4Q9UN42 357 aaPredicted RBP7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 PCDHB9Q9Y5E1 797 aa7.61□□□□□ -1.19
TSPAN8-205ENST00000550818 SCO2A0A1W2PP80 73 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 BNIP3LO60238 219 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 USP17L8P0C7I0 530 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 CENPCQ03188 943 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 RAB6BQ9NRW1 208 aa7.6□□□□□ -1.19
TSPAN8-205ENST00000550818 IL2RAP01589 272 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 ARAFP10398 606 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 ARTNQ5T4W7 220 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 CNKSR1Q969H4 720 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 ESYT1Q9BSJ8 1104 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 HRH3Q9Y5N1 445 aa7.59□□□□□ -1.19
TSPAN8-205ENST00000550818 NEURL1BA8MQ27 555 aa7.58□□□□□ -1.2
TSPAN8-205ENST00000550818 ZBBXA8MT70 800 aa7.58□□□□□ -1.2
TSPAN8-205ENST00000550818 MSX1P28360 303 aa7.58□□□□□ -1.2
TSPAN8-205ENST00000550818 CHSY3Q70JA7 882 aa7.58□□□□□ -1.2
TSPAN8-205ENST00000550818 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 SUPT5HO00267 1087 aaKnown RBP7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 CSB-PGBD3P0DP91 1061 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 PGBD3Q8N328 593 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 TRIM11Q96F44 468 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 ZFP64Q9NPA5 681 aa7.57□□□□□ -1.2
TSPAN8-205ENST00000550818 GNRH1P01148 92 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 RFC5P40937 340 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 MCM6Q14566 821 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 C4orf17Q53FE4 359 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 EFHC2Q5JST6 749 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 FHDC1Q9C0D6 1143 aaPredicted RBP7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 KLF15Q9UIH9 416 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 PCDHB11Q9Y5F2 797 aa7.56□□□□□ -1.2
TSPAN8-205ENST00000550818 BTBD11A6QL63 1104 aa7.55□□□□□ -1.2
TSPAN8-205ENST00000550818 ZSCAN10Q96SZ4 725 aaPredicted RBP7.55□□□□□ -1.2
TSPAN8-205ENST00000550818 PLVAPQ9BX97 442 aa7.55□□□□□ -1.2
TSPAN8-205ENST00000550818 TPSG1Q9NRR2 321 aa7.55□□□□□ -1.2
TSPAN8-205ENST00000550818 HCN2Q9UL51 889 aa7.55□□□□□ -1.2
TSPAN8-205ENST00000550818 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
TSPAN8-205ENST00000550818 DYRK3O43781 588 aa7.53□□□□□ -1.2
TSPAN8-205ENST00000550818 GNASQ5JWF2 1037 aa7.53□□□□□ -1.2
TSPAN8-205ENST00000550818 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
TSPAN8-205ENST00000550818 BANK1Q8NDB2 785 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms