RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 GTPBP4Q9BZE4 634 aaKnown RBP18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 FBXO31Q5XUX0 539 aaPredicted RBP18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 CTTNBP2Q8WZ74 1663 aa18.56■□□□□ 0.56
RBFOX1-212ENST00000550418 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 DDX19AQ9NUU7 478 aaKnown RBP18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 MYO6Q9UM54 1294 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 FAM193AP78312 1265 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 UBE2HP62256 183 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 DDX11Q96FC9 970 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 ADAMTS12P58397 1594 aa18.55■□□□□ 0.56
RBFOX1-212ENST00000550418 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 BBXQ8WY36 941 aaPredicted RBP18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 CCDC181Q5TID7 509 aa18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 NUTM1Q86Y26 1132 aa18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 AMOTL1Q8IY63 956 aa18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 THUMPD2Q9BTF0 503 aaKnown RBP18.54■□□□□ 0.56
RBFOX1-212ENST00000550418 SMC5Q8IY18 1101 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 ZNF165P49910 485 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 AACSQ86V21 672 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 EPB41L2O43491 1005 aaKnown RBP18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 STX6O43752 255 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 CTAGE5O15320 804 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 GSDMDP57764 484 aa18.53■□□□□ 0.56
RBFOX1-212ENST00000550418 TXLNAP40222 546 aa18.52■□□□□ 0.56
RBFOX1-212ENST00000550418 IDI1Q13907 227 aa18.52■□□□□ 0.56
RBFOX1-212ENST00000550418 CEP135Q66GS9 1140 aa18.52■□□□□ 0.56
RBFOX1-212ENST00000550418 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.56
RBFOX1-212ENST00000550418 JAKMIP3Q5VZ66 844 aa18.52■□□□□ 0.55
RBFOX1-212ENST00000550418 IQCEQ6IPM2 695 aa18.52■□□□□ 0.55
RBFOX1-212ENST00000550418 SEC24BO95487 1268 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 EPS15P42566 896 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 NUCB1Q02818 461 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 FANCAO15360 1455 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 PIP4K2BP78356 416 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 GLRX3O76003 335 aaKnown RBP18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 NLRP6P59044 892 aa18.51■□□□□ 0.55
RBFOX1-212ENST00000550418 SIL1Q9H173 461 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 KIF1BPQ96EK5 621 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 CAVIN2O95810 425 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 TMX3Q96JJ7 454 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 LRRFIP2Q9Y608 721 aaKnown RBP18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 GIMAP6Q6P9H5 292 aa18.5■□□□□ 0.55
RBFOX1-212ENST00000550418 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 CENPHQ9H3R5 247 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 RAB11FIP3O75154 756 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 CASQ1P31415 396 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 SHTN1A0MZ66 631 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 TTC22Q5TAA0 569 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 TRIM22Q8IYM9 498 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 TBC1D2BQ9UPU7 963 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
RBFOX1-212ENST00000550418 LUC7LQ9NQ29 371 aaKnown RBP18.48■□□□□ 0.55
RBFOX1-212ENST00000550418 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
RBFOX1-212ENST00000550418 CT47A1Q5JQC4 288 aaPredicted RBP18.48■□□□□ 0.55
RBFOX1-212ENST00000550418 GIMAP7Q8NHV1 300 aa18.48■□□□□ 0.55
RBFOX1-212ENST00000550418 WDR62O43379 1518 aa18.48■□□□□ 0.55
RBFOX1-212ENST00000550418 KIF5CO60282 957 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 VPS37DQ86XT2 251 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 PLCD4Q9BRC7 762 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 CCDC148Q8NFR7 591 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 CCDC171Q6TFL3 1326 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 ERLIN2O94905 339 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 STIM1Q13586 685 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 MAP9Q49MG5 647 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 CCDC186Q7Z3E2 898 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 RAPGEF4Q8WZA2 1011 aa18.47■□□□□ 0.55
RBFOX1-212ENST00000550418 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 NOL7Q9UMY1 257 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 EIF4G3O43432 1585 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 STK11IPQ8N1F8 1099 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 RBM25P49756 843 aaKnown RBP18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 FAM107BQ9H098 131 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 CDKL5O76039 1030 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 LMAN1P49257 510 aa18.46■□□□□ 0.55
RBFOX1-212ENST00000550418 GJB2P29033 226 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 ODF2Q5BJF6 829 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 TXLNBQ8N3L3 684 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 RPGRIP1LQ68CZ1 1315 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 STX1AQ16623 288 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 HSP90AB2PQ58FF8 381 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 FAM200AQ8TCP9 573 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
RBFOX1-212ENST00000550418 TMC6Q7Z403 805 aa18.44■□□□□ 0.54
RBFOX1-212ENST00000550418 USP48Q86UV5 1035 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms