RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ZNF687Q8N1G0 1237 aa6.74□□□□□ -1.33
APP-217ENST00000548570 EFCAB3Q8N7B9 438 aa6.74□□□□□ -1.33
APP-217ENST00000548570 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
APP-217ENST00000548570 USP21Q9UK80 565 aa6.74□□□□□ -1.33
APP-217ENST00000548570 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
APP-217ENST00000548570 DISP2A7MBM2 1401 aa6.74□□□□□ -1.33
APP-217ENST00000548570 SPATA31A1Q5TZJ5 1347 aa6.74□□□□□ -1.33
APP-217ENST00000548570 SPATA31A5Q5VU36 1347 aa6.74□□□□□ -1.33
APP-217ENST00000548570 SPATA31A7Q8IWB4 1347 aa6.74□□□□□ -1.33
APP-217ENST00000548570 KDRP35968 1356 aa6.73□□□□□ -1.33
APP-217ENST00000548570 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
APP-217ENST00000548570 IFNLR1Q8IU57 520 aaPredicted RBP6.73□□□□□ -1.33
APP-217ENST00000548570 PLEKHF1Q96S99 279 aa6.73□□□□□ -1.33
APP-217ENST00000548570 CARD10Q9BWT7 1032 aa6.73□□□□□ -1.33
APP-217ENST00000548570 RSPH6AQ9H0K4 717 aa6.73□□□□□ -1.33
APP-217ENST00000548570 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
APP-217ENST00000548570 COL14A1Q05707 1796 aaKnown RBP6.72□□□□□ -1.33
APP-217ENST00000548570 MEGF6O75095 1541 aa6.72□□□□□ -1.33
APP-217ENST00000548570 ONECUT3O60422 494 aaPredicted RBP6.72□□□□□ -1.33
APP-217ENST00000548570 HMOX1P09601 288 aa6.72□□□□□ -1.33
APP-217ENST00000548570 MEX3CQ5U5Q3 659 aaKnown RBP6.72□□□□□ -1.33
APP-217ENST00000548570 MICALL2Q8IY33 904 aa6.72□□□□□ -1.33
APP-217ENST00000548570 PHACTR3Q96KR7 559 aa6.72□□□□□ -1.33
APP-217ENST00000548570 NLRP2Q9NX02 1062 aa6.72□□□□□ -1.33
APP-217ENST00000548570 CRB1P82279 1406 aa6.72□□□□□ -1.33
APP-217ENST00000548570 NRAPQ86VF7 1730 aa6.72□□□□□ -1.33
APP-217ENST00000548570 EVA1CP58658 441 aa6.71□□□□□ -1.34
APP-217ENST00000548570 SULT6B1Q6IMI4 303 aa6.71□□□□□ -1.34
APP-217ENST00000548570 TOM1L2Q6ZVM7 507 aa6.71□□□□□ -1.34
APP-217ENST00000548570 GJD4Q96KN9 370 aaPredicted RBP6.71□□□□□ -1.34
APP-217ENST00000548570 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
APP-217ENST00000548570 USP35Q9P2H5 1018 aa6.71□□□□□ -1.34
APP-217ENST00000548570 FAM208AQ9UK61 1670 aaKnown RBP6.71□□□□□ -1.34
APP-217ENST00000548570 RGPD1P0DJD0 1748 aa6.7□□□□□ -1.34
APP-217ENST00000548570 GLI3P10071 1580 aa6.7□□□□□ -1.34
APP-217ENST00000548570 SENP3-EIF4A1A0A087X0R7 540 aa6.7□□□□□ -1.34
APP-217ENST00000548570 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
APP-217ENST00000548570 U2AF1L5P0DN76 240 aaPredicted RBP6.7□□□□□ -1.34
APP-217ENST00000548570 CSB-PGBD3P0DP91 1061 aa6.7□□□□□ -1.34
APP-217ENST00000548570 PRKAR2BP31323 418 aa6.7□□□□□ -1.34
APP-217ENST00000548570 U2AF1Q01081 240 aaKnown RBP eCLIP6.7□□□□□ -1.34
APP-217ENST00000548570 BARGINQ6ZT62 677 aa6.7□□□□□ -1.34
APP-217ENST00000548570 CCDC146Q8IYE0 955 aa6.7□□□□□ -1.34
APP-217ENST00000548570 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
APP-217ENST00000548570 CFAP53Q96M91 514 aa6.7□□□□□ -1.34
APP-217ENST00000548570 TRPC5Q9UL62 973 aaPredicted RBP6.7□□□□□ -1.34
APP-217ENST00000548570 PLCH1Q4KWH8 1693 aa6.7□□□□□ -1.34
APP-217ENST00000548570 OVOS2A0A0G2JMS6 1433 aa6.69□□□□□ -1.34
APP-217ENST00000548570 FCHSD2O94868 740 aa6.69□□□□□ -1.34
APP-217ENST00000548570 FAM98CQ17RN3 349 aaKnown RBP6.69□□□□□ -1.34
APP-217ENST00000548570 MTHFSDQ2M296 383 aaKnown RBP6.69□□□□□ -1.34
APP-217ENST00000548570 ZNF772Q68DY9 489 aaPredicted RBP6.69□□□□□ -1.34
APP-217ENST00000548570 TAOK2Q9UL54 1235 aa6.69□□□□□ -1.34
APP-217ENST00000548570 LTN1O94822 1766 aa6.68□□□□□ -1.34
APP-217ENST00000548570 CYP27B1O15528 508 aa6.68□□□□□ -1.34
APP-217ENST00000548570 IL2RBP14784 551 aa6.68□□□□□ -1.34
APP-217ENST00000548570 ANKRD13DQ6ZTN6 518 aa6.68□□□□□ -1.34
APP-217ENST00000548570 FAM9BQ8IZU0 186 aa6.68□□□□□ -1.34
APP-217ENST00000548570 NUDCQ9Y266 331 aa6.68□□□□□ -1.34
APP-217ENST00000548570 THRAP3Q9Y2W1 955 aaKnown RBP6.68□□□□□ -1.34
APP-217ENST00000548570 RGS12O14924 1447 aa6.67□□□□□ -1.34
APP-217ENST00000548570 RIOK3O14730 519 aaKnown RBP6.67□□□□□ -1.34
APP-217ENST00000548570 RBM6P78332 1123 aaKnown RBP6.67□□□□□ -1.34
APP-217ENST00000548570 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
APP-217ENST00000548570 SEPT12Q8IYM1 358 aa6.67□□□□□ -1.34
APP-217ENST00000548570 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
APP-217ENST00000548570 NWD2Q9ULI1 1742 aa6.67□□□□□ -1.34
APP-217ENST00000548570 THSD7AQ9UPZ6 1657 aa6.66□□□□□ -1.34
APP-217ENST00000548570 APAF1O14727 1248 aa6.66□□□□□ -1.34
APP-217ENST00000548570 PHKG2P15735 406 aa6.66□□□□□ -1.34
APP-217ENST00000548570 WDR43Q15061 677 aaKnown RBP eCLIP6.66□□□□□ -1.34
APP-217ENST00000548570 NKX1-1Q15270 411 aaPredicted RBP6.66□□□□□ -1.34
APP-217ENST00000548570 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
APP-217ENST00000548570 PTF1AQ7RTS3 328 aa6.66□□□□□ -1.34
APP-217ENST00000548570 RUNDC1Q96C34 613 aa6.66□□□□□ -1.34
APP-217ENST00000548570 RRP7AQ9Y3A4 280 aaKnown RBP6.66□□□□□ -1.34
APP-217ENST00000548570 CCDC9Q9Y3X0 531 aaKnown RBP6.66□□□□□ -1.34
APP-217ENST00000548570 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.66□□□□□ -1.34
APP-217ENST00000548570 PLEKHG2Q9H7P9 1386 aa6.66□□□□□ -1.34
APP-217ENST00000548570 KDM6AO15550 1401 aaPredicted RBP6.66□□□□□ -1.34
APP-217ENST00000548570 MAP2P11137 1827 aaKnown RBP6.65□□□□□ -1.34
APP-217ENST00000548570 TATP17735 454 aaPredicted RBP6.65□□□□□ -1.34
APP-217ENST00000548570 RXRBP28702 533 aa6.65□□□□□ -1.34
APP-217ENST00000548570 TMPOP42166 694 aaKnown RBP6.65□□□□□ -1.34
APP-217ENST00000548570 IL17REQ8NFR9 667 aa6.65□□□□□ -1.34
APP-217ENST00000548570 ZCRB1Q8TBF4 217 aaKnown RBP6.65□□□□□ -1.34
APP-217ENST00000548570 RAPGEF4Q8WZA2 1011 aa6.65□□□□□ -1.34
APP-217ENST00000548570 LGR6Q9HBX8 967 aa6.65□□□□□ -1.34
APP-217ENST00000548570 ZNF521Q96K83 1311 aa6.65□□□□□ -1.35
APP-217ENST00000548570 TNS2Q63HR2 1409 aa6.65□□□□□ -1.35
APP-217ENST00000548570 RGPD5Q99666 1765 aa6.64□□□□□ -1.35
APP-217ENST00000548570 DCTN1Q14203 1278 aa6.64□□□□□ -1.35
APP-217ENST00000548570 NFE2L2Q16236 605 aa6.64□□□□□ -1.35
APP-217ENST00000548570 DDB1Q16531 1140 aa6.64□□□□□ -1.35
APP-217ENST00000548570 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
APP-217ENST00000548570 ARSIQ5FYB1 569 aa6.64□□□□□ -1.35
APP-217ENST00000548570 ZNF530Q6P9A1 599 aaPredicted RBP6.64□□□□□ -1.35
APP-217ENST00000548570 DDX54Q8TDD1 881 aaKnown RBP6.64□□□□□ -1.35
APP-217ENST00000548570 THUMPD2Q9BTF0 503 aaKnown RBP6.64□□□□□ -1.35
APP-217ENST00000548570 CDCA7Q9BWT1 371 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms