RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 KIF3CO14782 793 aa12.92□□□□□ -0.34
LETMD1-217ENST00000548516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
LETMD1-217ENST00000548516 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
LETMD1-217ENST00000548516 FCHSD2O94868 740 aa12.91□□□□□ -0.34
LETMD1-217ENST00000548516 NLGN1Q8N2Q7 840 aa12.91□□□□□ -0.34
LETMD1-217ENST00000548516 DPEP1P16444 411 aa12.9□□□□□ -0.34
LETMD1-217ENST00000548516 RFC4P35249 363 aa12.9□□□□□ -0.34
LETMD1-217ENST00000548516 TGFB2P61812 414 aa12.9□□□□□ -0.34
LETMD1-217ENST00000548516 EIF4A2Q14240 407 aaKnown RBP12.9□□□□□ -0.34
LETMD1-217ENST00000548516 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
LETMD1-217ENST00000548516 CABP4P57796 275 aa12.89□□□□□ -0.35
LETMD1-217ENST00000548516 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
LETMD1-217ENST00000548516 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
LETMD1-217ENST00000548516 PARP3Q9Y6F1 533 aa12.89□□□□□ -0.35
LETMD1-217ENST00000548516 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
LETMD1-217ENST00000548516 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
LETMD1-217ENST00000548516 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-217ENST00000548516 ITGB4P16144 1822 aa12.88□□□□□ -0.35
LETMD1-217ENST00000548516 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
LETMD1-217ENST00000548516 PTCD1O75127 700 aaKnown RBP12.87□□□□□ -0.35
LETMD1-217ENST00000548516 HSP90AB1P08238 724 aaKnown RBP12.87□□□□□ -0.35
LETMD1-217ENST00000548516 GYS1P13807 737 aa12.87□□□□□ -0.35
LETMD1-217ENST00000548516 APLP1P51693 650 aa12.87□□□□□ -0.35
LETMD1-217ENST00000548516 ZNF530Q6P9A1 599 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-217ENST00000548516 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
LETMD1-217ENST00000548516 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 RPS6KA4O75676 772 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 TOMM70O94826 608 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
LETMD1-217ENST00000548516 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
LETMD1-217ENST00000548516 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
LETMD1-217ENST00000548516 ADRA2BP18089 450 aa12.85□□□□□ -0.35
LETMD1-217ENST00000548516 MTHFSP49914 203 aa12.85□□□□□ -0.35
LETMD1-217ENST00000548516 SRP68Q9UHB9 627 aaKnown RBP12.85□□□□□ -0.35
LETMD1-217ENST00000548516 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
LETMD1-217ENST00000548516 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
LETMD1-217ENST00000548516 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
LETMD1-217ENST00000548516 TIMELESSQ9UNS1 1208 aa12.84□□□□□ -0.35
LETMD1-217ENST00000548516 PKD1L3Q7Z443 1732 aa12.84□□□□□ -0.35
LETMD1-217ENST00000548516 HTRA3P83110 453 aa12.83□□□□□ -0.36
LETMD1-217ENST00000548516 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
LETMD1-217ENST00000548516 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
LETMD1-217ENST00000548516 CICQ96RK0 1608 aaPredicted RBP12.83□□□□□ -0.36
LETMD1-217ENST00000548516 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
LETMD1-217ENST00000548516 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
LETMD1-217ENST00000548516 KDRP35968 1356 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 CHRNA5P30532 468 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
LETMD1-217ENST00000548516 FKBP8Q14318 412 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 PANK3Q9H999 370 aa12.82□□□□□ -0.36
LETMD1-217ENST00000548516 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 KCNA3P22001 575 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 DNAJC5GQ8N7S2 189 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 RNF181Q9P0P0 153 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 CLSPNQ9HAW4 1339 aa12.81□□□□□ -0.36
LETMD1-217ENST00000548516 ANKRD26Q9UPS8 1709 aa12.8□□□□□ -0.36
LETMD1-217ENST00000548516 DDR1Q08345 913 aa12.8□□□□□ -0.36
LETMD1-217ENST00000548516 SULT6B1Q6IMI4 303 aa12.8□□□□□ -0.36
LETMD1-217ENST00000548516 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
LETMD1-217ENST00000548516 ZPR1O75312 459 aa12.79□□□□□ -0.36
LETMD1-217ENST00000548516 KDM2BQ8NHM5 1336 aa12.79□□□□□ -0.36
LETMD1-217ENST00000548516 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-217ENST00000548516 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
LETMD1-217ENST00000548516 USPL1Q5W0Q7 1092 aa12.78□□□□□ -0.36
LETMD1-217ENST00000548516 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
LETMD1-217ENST00000548516 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
LETMD1-217ENST00000548516 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
LETMD1-217ENST00000548516 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
LETMD1-217ENST00000548516 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
LETMD1-217ENST00000548516 FSTL1Q12841 308 aa12.76□□□□□ -0.37
LETMD1-217ENST00000548516 KLRG1Q96E93 195 aa12.76□□□□□ -0.37
LETMD1-217ENST00000548516 CAPN15O75808 1086 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 C4AP0C0L4 1744 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 TM4SF1P30408 202 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
LETMD1-217ENST00000548516 RASSF7Q02833 373 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 KCPQ6ZWJ8 1503 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 PLEKHG2Q9H7P9 1386 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 LGR6Q9HBX8 967 aa12.75□□□□□ -0.37
LETMD1-217ENST00000548516 HMOX1P09601 288 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 IL13P35225 146 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 NFIXQ14938 502 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 COL13A1Q5TAT6 717 aaPredicted RBP12.73□□□□□ -0.37
LETMD1-217ENST00000548516 BICDL1Q6ZP65 573 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 SMC1BQ8NDV3 1235 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
LETMD1-217ENST00000548516 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
LETMD1-217ENST00000548516 KIAA1551Q9HCM1 1747 aa12.72□□□□□ -0.37
LETMD1-217ENST00000548516 SERPINB2P05120 415 aa12.72□□□□□ -0.37
LETMD1-217ENST00000548516 CYP19A1P11511 503 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms