RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	C4orf17	Q53FE4	359 aa		8.77	□□□□□ -1.01
RPAP3-205	ENST00000548211	RNF225	M0QZC1	329 aa	Predicted RBP	8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	MAP3K10	Q02779	954 aa		8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	USP4	Q13107	963 aa		8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	TMEM214	Q6NUQ4	689 aa	Known RBP	8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	TRERF1	Q96PN7	1200 aa		8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	PRM3	Q9NNZ6	103 aa		8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	CHIC2	Q9UKJ5	165 aa		8.76	□□□□□ -1.01
RPAP3-205	ENST00000548211	MX2	P20592	715 aa		8.75	□□□□□ -1.01
RPAP3-205	ENST00000548211	RUBCNL	Q9H714	662 aa		8.75	□□□□□ -1.01
RPAP3-205	ENST00000548211	CNTNAP5	Q8WYK1	1306 aa		8.75	□□□□□ -1.01
RPAP3-205	ENST00000548211	UBAP2L	Q14157	1087 aa	Known RBP	8.74	□□□□□ -1.01
RPAP3-205	ENST00000548211	BCR	P11274	1271 aa		8.73	□□□□□ -1.01
RPAP3-205	ENST00000548211	MSX1	P28360	303 aa		8.73	□□□□□ -1.01
RPAP3-205	ENST00000548211	SCNN1D	P51172	638 aa		8.73	□□□□□ -1.01
RPAP3-205	ENST00000548211	MCM6	Q14566	821 aa		8.73	□□□□□ -1.01
RPAP3-205	ENST00000548211		A0A1B0GTH6	734 aa		8.72	□□□□□ -1.01
RPAP3-205	ENST00000548211	TLR1	Q15399	786 aa		8.72	□□□□□ -1.01
RPAP3-205	ENST00000548211	ESCO1	Q5FWF5	840 aa		8.72	□□□□□ -1.01
RPAP3-205	ENST00000548211	GNAS	Q5JWF2	1037 aa		8.72	□□□□□ -1.01
RPAP3-205	ENST00000548211	SCARF2	Q96GP6	870 aa	Predicted RBP	8.72	□□□□□ -1.01
RPAP3-205	ENST00000548211	PIK3CD	O00329	1044 aa		8.71	□□□□□ -1.02
RPAP3-205	ENST00000548211	PPARGC1B	Q86YN6	1023 aa	Known RBP	8.71	□□□□□ -1.02
RPAP3-205	ENST00000548211	PLPP7	Q8NBV4	271 aa		8.71	□□□□□ -1.02
RPAP3-205	ENST00000548211	GTF2E1	P29083	439 aa	Predicted RBP	8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	GDF10	P55107	478 aa		8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	C1orf229	Q6ZS94	237 aa	Predicted RBP	8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	NEDD1	Q8NHV4	660 aa		8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	RHBDD1	Q8TEB9	315 aa		8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	ENAM	Q9NRM1	1142 aa		8.7	□□□□□ -1.02
RPAP3-205	ENST00000548211	INHA	P05111	366 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	SEMA3F	Q13275	785 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	SUZ12	Q15022	739 aa	Known RBP	8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	WASHC4	Q2M389	1173 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	GPAT2	Q6NUI2	795 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	CFHR5	Q9BXR6	569 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	COG6	Q9Y2V7	657 aa		8.69	□□□□□ -1.02
RPAP3-205	ENST00000548211	C2CD2L	O14523	706 aa		8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	PLA2G4A	P47712	749 aa		8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	KANK3	Q6NY19	840 aa		8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	KLRG1	Q96E93	195 aa		8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	SERTAD1	Q9UHV2	236 aa		8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	8.68	□□□□□ -1.02
RPAP3-205	ENST00000548211	OIP5	O43482	229 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	CSB-PGBD3	P0DP91	1061 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	PGBD3	Q8N328	593 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	SIRT1	Q96EB6	747 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	ABHD17A	Q96GS6	310 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	POM121	Q96HA1	1249 aa		8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	OXCT2	Q9BYC2	517 aa	Predicted RBP	8.67	□□□□□ -1.02
RPAP3-205	ENST00000548211	TMEM229A	B2RXF0	380 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	SHISA8	B8ZZ34	492 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	BNIP3L	O60238	219 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	SNRPN	P63162	240 aa	Known RBP	8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	CTBS	Q01459	385 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	MAP7D1	Q3KQU3	841 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	NSFL1C	Q9UNZ2	370 aa	Known RBP	8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	USP3	Q9Y6I4	520 aa		8.66	□□□□□ -1.02
RPAP3-205	ENST00000548211	ATP4A	P20648	1035 aa		8.65	□□□□□ -1.02
RPAP3-205	ENST00000548211	SMTN	P53814	917 aa		8.65	□□□□□ -1.02
RPAP3-205	ENST00000548211	AIDA	Q96BJ3	306 aa		8.65	□□□□□ -1.02
RPAP3-205	ENST00000548211	NDFIP2	Q9NV92	336 aa		8.65	□□□□□ -1.02
RPAP3-205	ENST00000548211	HCN2	Q9UL51	889 aa		8.65	□□□□□ -1.02
RPAP3-205	ENST00000548211	LOC100996750	A0A140TA64	210 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	MAP2K3	P46734	347 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	EFHC2	Q5JST6	749 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	ZNF295-AS1	Q8N0V1	137 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	BEND7	Q8N7W2	519 aa	Predicted RBP	8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	GALNT6	Q8NCL4	622 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	KRTAP4-6	Q9BYQ5	205 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	CRISPLD1	Q9H336	500 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	DNAAF2	Q9NVR5	837 aa	Known RBP	8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	PHF24	Q9UPV7	400 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	PCDHGA11	Q9Y5H2	935 aa		8.64	□□□□□ -1.03
RPAP3-205	ENST00000548211	ITGB2	P05107	769 aa		8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	LBR	Q14739	615 aa	Known RBP	8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	TBC1D9	Q6ZT07	1266 aa		8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	DCAF5	Q96JK2	942 aa		8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	ZCCHC2	Q9C0B9	1178 aa	Known RBP	8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	ALG2	Q9H553	416 aa		8.63	□□□□□ -1.03
RPAP3-205	ENST00000548211	SKI	P12755	728 aa		8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	FGFR3	P22607	806 aa		8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	SOX11	P35716	441 aa		8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	NIFK	Q9BYG3	293 aa	Known RBP	8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	LRRC4B	Q9NT99	713 aa		8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	8.62	□□□□□ -1.03
RPAP3-205	ENST00000548211		A6NJY4	79 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	PHF20L1	A8MW92	1017 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	BMP4	P12644	408 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	PLA2G4E	Q3MJ16	856 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	PODN	Q7Z5L7	613 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	EDARADD	Q8WWZ3	215 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	SLC4A9	Q96Q91	983 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	PARP3	Q9Y6F1	533 aa		8.61	□□□□□ -1.03
RPAP3-205	ENST00000548211	MTFR1	Q15390	333 aa		8.6	□□□□□ -1.03
RPAP3-205	ENST00000548211	DEPDC4	Q8N2C3	294 aa		8.6	□□□□□ -1.03
RPAP3-205	ENST00000548211	GGA1	Q9UJY5	639 aa		8.6	□□□□□ -1.03
RPAP3-205	ENST00000548211	POM121C	A8CG34	1229 aa		8.59	□□□□□ -1.03
RPAP3-205	ENST00000548211	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	8.59	□□□□□ -1.03

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