RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 MICAL1Q8TDZ2 1067 aa12.95□□□□□ -0.34
PFKM-206ENST00000546964 PIBF1Q8WXW3 757 aa12.95□□□□□ -0.34
PFKM-206ENST00000546964 JPH2Q9BR39 696 aaPredicted RBP12.95□□□□□ -0.34
PFKM-206ENST00000546964 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
PFKM-206ENST00000546964 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
PFKM-206ENST00000546964 FMNL1O95466 1100 aaPredicted RBP12.95□□□□□ -0.34
PFKM-206ENST00000546964 ZBED6P86452 979 aa12.95□□□□□ -0.34
PFKM-206ENST00000546964 CRACR2AQ9BSW2 395 aa12.95□□□□□ -0.34
PFKM-206ENST00000546964 SF3B2Q13435 895 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 CCDC178Q5BJE1 867 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 CCDC70Q6NSX1 233 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 NCAPG2Q86XI2 1143 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 TRIM42Q8IWZ5 723 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 NEK9Q8TD19 979 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 RWDD1Q9H446 243 aaPredicted RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 ITM2BQ9Y287 266 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 CTIFO43310 598 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 FOXR1Q6PIV2 292 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 TRIM11Q96F44 468 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 EIF3CLB5ME19 914 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 RWDD2BP57060 319 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 SUGP1Q8IWZ8 645 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 N4BP2L2Q92802 583 aaPredicted RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 EIF3CQ99613 913 aaKnown RBP12.94□□□□□ -0.34
PFKM-206ENST00000546964 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 DIAPH3Q9NSV4 1193 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
PFKM-206ENST00000546964 MAGEA8P43361 318 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 ATP2B2Q01814 1243 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.93□□□□□ -0.34
PFKM-206ENST00000546964 SH3GL3Q99963 347 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 SETSIPP0DME0 302 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 LRRC31Q6UY01 552 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 CCDC186Q7Z3E2 898 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 TXLNBQ8N3L3 684 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 TBC1D5Q92609 795 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 CEP89Q96ST8 783 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 SLX1AQ9BQ83 275 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 CWC15Q9P013 229 aaKnown RBP12.93□□□□□ -0.34
PFKM-206ENST00000546964 CUX2O14529 1486 aa12.93□□□□□ -0.34
PFKM-206ENST00000546964 MAP4K4O95819 1239 aaPredicted RBP12.92□□□□□ -0.34
PFKM-206ENST00000546964 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
PFKM-206ENST00000546964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
PFKM-206ENST00000546964 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
PFKM-206ENST00000546964 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.92□□□□□ -0.34
PFKM-206ENST00000546964 MAPK8IP1Q9UQF2 711 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 SHTN1A0MZ66 631 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 ENO4A6NNW6 628 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 GCKP35557 465 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 MKL1Q969V6 931 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 TAX1BP1Q86VP1 789 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 SPATS2LQ9NUQ6 558 aaKnown RBP12.92□□□□□ -0.34
PFKM-206ENST00000546964 UBAP1Q9NZ09 502 aa12.92□□□□□ -0.34
PFKM-206ENST00000546964 DYTNA2CJ06 578 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 SCNN1BP51168 640 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 IFT88Q13099 833 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 TDRD7Q8NHU6 1098 aaKnown RBP12.91□□□□□ -0.34
PFKM-206ENST00000546964 RCAN3Q9UKA8 241 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 RAD50Q92878 1312 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 TRAIPQ9BWF2 469 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
PFKM-206ENST00000546964 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
PFKM-206ENST00000546964 CDKL5O76039 1030 aa12.9□□□□□ -0.34
PFKM-206ENST00000546964 ZNF662Q6ZS27 426 aa12.9□□□□□ -0.34
PFKM-206ENST00000546964 NACA2Q9H009 215 aa12.9□□□□□ -0.34
PFKM-206ENST00000546964 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.35
PFKM-206ENST00000546964 SNUPNO95149 360 aaKnown RBP12.9□□□□□ -0.35
PFKM-206ENST00000546964 FBXO38Q6PIJ6 1188 aa12.9□□□□□ -0.35
PFKM-206ENST00000546964 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.35
PFKM-206ENST00000546964 MYL1P05976 194 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 ELF1P32519 619 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.89□□□□□ -0.35
PFKM-206ENST00000546964 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 MKS1Q9NXB0 559 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 MYCLP1P12525 358 aaPredicted RBP12.89□□□□□ -0.35
PFKM-206ENST00000546964 ZSCAN23Q3MJ62 389 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 PLEKHA4Q9H4M7 779 aa12.89□□□□□ -0.35
PFKM-206ENST00000546964 RBBP5Q15291 538 aaKnown RBP12.88□□□□□ -0.35
PFKM-206ENST00000546964 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
PFKM-206ENST00000546964 LMAN1P49257 510 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 ZFYVE27Q5T4F4 411 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 PLEKHG4BQ96PX9 1271 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 N6AMT1Q9Y5N5 214 aa12.88□□□□□ -0.35
PFKM-206ENST00000546964 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
PFKM-206ENST00000546964 HOOK3Q86VS8 718 aa12.87□□□□□ -0.35
PFKM-206ENST00000546964 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
PFKM-206ENST00000546964 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
PFKM-206ENST00000546964 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
PFKM-206ENST00000546964 DRAXINQ8NBI3 349 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms