RNA–Protein interactions for RNA: ENST00000546873.1

CHPT1-203, Transcript of choline phosphotransferase 1, humanhuman

TSL 3

Gene CHPT1, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-203ENST00000546873 VWA5B2Q8N398 1253 aa11.67□□□□□ -0.54
CHPT1-203ENST00000546873 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
CHPT1-203ENST00000546873 MAP7D1Q3KQU3 841 aa11.66□□□□□ -0.54
CHPT1-203ENST00000546873 TARBP1Q13395 1621 aaKnown RBP11.66□□□□□ -0.54
CHPT1-203ENST00000546873 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
CHPT1-203ENST00000546873 CNKSR1Q969H4 720 aa11.65□□□□□ -0.54
CHPT1-203ENST00000546873 ESYT1Q9BSJ8 1104 aa11.65□□□□□ -0.54
CHPT1-203ENST00000546873 RAB6BQ9NRW1 208 aa11.65□□□□□ -0.54
CHPT1-203ENST00000546873 POU4F2Q12837 409 aa11.64□□□□□ -0.55
CHPT1-203ENST00000546873 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
CHPT1-203ENST00000546873 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
CHPT1-203ENST00000546873 TSGA10IPQ3SY00 556 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 WDR44Q5JSH3 913 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 FOXR1Q6PIV2 292 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 RIPOR1Q6ZS17 1223 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 TAS1R3Q7RTX0 852 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
CHPT1-203ENST00000546873 PLPP7Q8NBV4 271 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 GMCL1Q96IK5 515 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 COL25A1Q9BXS0 654 aaPredicted RBP11.62□□□□□ -0.55
CHPT1-203ENST00000546873 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 DYRK1BQ9Y463 629 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 GAPVD1Q14C86 1478 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
CHPT1-203ENST00000546873 SPATA31C2B4DYI2 1134 aa11.61□□□□□ -0.55
CHPT1-203ENST00000546873 CENPCQ03188 943 aa11.61□□□□□ -0.55
CHPT1-203ENST00000546873 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
CHPT1-203ENST00000546873 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
CHPT1-203ENST00000546873 ZSCAN10Q96SZ4 725 aaPredicted RBP11.61□□□□□ -0.55
CHPT1-203ENST00000546873 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CHPT1-203ENST00000546873 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
CHPT1-203ENST00000546873 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
CHPT1-203ENST00000546873 H7C1W4 665 aa11.6□□□□□ -0.55
CHPT1-203ENST00000546873 WASLO00401 505 aaPredicted RBP11.6□□□□□ -0.55
CHPT1-203ENST00000546873 GNASQ5JWF2 1037 aa11.6□□□□□ -0.55
CHPT1-203ENST00000546873 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
CHPT1-203ENST00000546873 GAS2L1Q99501 681 aaPredicted RBP11.6□□□□□ -0.55
CHPT1-203ENST00000546873 TIMMDC1Q9NPL8 285 aa11.6□□□□□ -0.55
CHPT1-203ENST00000546873 IL2RAP01589 272 aa11.59□□□□□ -0.55
CHPT1-203ENST00000546873 TMEM214Q6NUQ4 689 aaKnown RBP11.59□□□□□ -0.55
CHPT1-203ENST00000546873 SYNJ1O43426 1573 aa11.58□□□□□ -0.55
CHPT1-203ENST00000546873 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CHPT1-203ENST00000546873 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
CHPT1-203ENST00000546873 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
CHPT1-203ENST00000546873 POM121Q96HA1 1249 aa11.58□□□□□ -0.56
CHPT1-203ENST00000546873 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
CHPT1-203ENST00000546873 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
CHPT1-203ENST00000546873 ALG2Q9H553 416 aa11.56□□□□□ -0.56
CHPT1-203ENST00000546873 SKIP12755 728 aa11.55□□□□□ -0.56
CHPT1-203ENST00000546873 LORP23490 312 aaPredicted RBP11.55□□□□□ -0.56
CHPT1-203ENST00000546873 EML3Q32P44 896 aa11.55□□□□□ -0.56
CHPT1-203ENST00000546873 ETNK1Q9HBU6 452 aa11.55□□□□□ -0.56
CHPT1-203ENST00000546873 LZTS3O60299 673 aaPredicted RBP11.54□□□□□ -0.56
CHPT1-203ENST00000546873 F11P03951 625 aa11.54□□□□□ -0.56
CHPT1-203ENST00000546873 TLR1Q15399 786 aa11.54□□□□□ -0.56
CHPT1-203ENST00000546873 NFATC2IPQ8NCF5 419 aa11.54□□□□□ -0.56
CHPT1-203ENST00000546873 TRERF1Q96PN7 1200 aa11.54□□□□□ -0.56
CHPT1-203ENST00000546873 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
CHPT1-203ENST00000546873 KRT76Q01546 638 aa11.53□□□□□ -0.56
CHPT1-203ENST00000546873 ZNF837Q96EG3 531 aaPredicted RBP11.53□□□□□ -0.56
CHPT1-203ENST00000546873 NOD1Q9Y239 953 aa11.53□□□□□ -0.56
CHPT1-203ENST00000546873 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
CHPT1-203ENST00000546873 A0A1B0GTH6 734 aa11.52□□□□□ -0.57
CHPT1-203ENST00000546873 PHKA2P46019 1235 aa11.52□□□□□ -0.57
CHPT1-203ENST00000546873 GDF10P55107 478 aa11.52□□□□□ -0.57
CHPT1-203ENST00000546873 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
CHPT1-203ENST00000546873 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
CHPT1-203ENST00000546873 PIK3CDO00329 1044 aa11.51□□□□□ -0.57
CHPT1-203ENST00000546873 INHAP05111 366 aa11.51□□□□□ -0.57
CHPT1-203ENST00000546873 DBN1Q16643 649 aa11.51□□□□□ -0.57
CHPT1-203ENST00000546873 RHBDD1Q8TEB9 315 aa11.51□□□□□ -0.57
CHPT1-203ENST00000546873 FHDC1Q9C0D6 1143 aaPredicted RBP11.51□□□□□ -0.57
CHPT1-203ENST00000546873 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
CHPT1-203ENST00000546873 PGBD3Q8N328 593 aa11.5□□□□□ -0.57
CHPT1-203ENST00000546873 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
CHPT1-203ENST00000546873 SOGA1O94964 1423 aa11.5□□□□□ -0.57
CHPT1-203ENST00000546873 KIF13AQ9H1H9 1805 aa11.49□□□□□ -0.57
CHPT1-203ENST00000546873 PSME1Q06323 249 aa11.49□□□□□ -0.57
CHPT1-203ENST00000546873 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
CHPT1-203ENST00000546873 SVOPQ8N4V2 548 aa11.49□□□□□ -0.57
CHPT1-203ENST00000546873 GTPBP3Q969Y2 492 aaKnown RBP11.49□□□□□ -0.57
CHPT1-203ENST00000546873 GPAMQ9HCL2 828 aa11.49□□□□□ -0.57
CHPT1-203ENST00000546873 SYNJ2O15056 1496 aa11.49□□□□□ -0.57
CHPT1-203ENST00000546873 MAGI1Q96QZ7 1491 aaPredicted RBP11.49□□□□□ -0.57
CHPT1-203ENST00000546873 STAU1O95793 577 aaKnown RBP11.48□□□□□ -0.57
CHPT1-203ENST00000546873 SRSF11Q05519 484 aaKnown RBP11.48□□□□□ -0.57
CHPT1-203ENST00000546873 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
CHPT1-203ENST00000546873 GPR25O00155 361 aa11.47□□□□□ -0.57
CHPT1-203ENST00000546873 SCNN1DP51172 638 aa11.47□□□□□ -0.57
CHPT1-203ENST00000546873 HDGFL1Q5TGJ6 251 aa11.47□□□□□ -0.57
CHPT1-203ENST00000546873 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
CHPT1-203ENST00000546873 POM121CA8CG34 1229 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 ADAMTS2O95450 1211 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 SLURP2P0DP57 97 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 SMTNP53814 917 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 TRIM50Q86XT4 487 aa11.46□□□□□ -0.57
CHPT1-203ENST00000546873 NIFKQ9BYG3 293 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms