RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 BEND7Q8N7W2 519 aaPredicted RBP10.21□□□□□ -0.77
CCDC38-204ENST00000546816 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
CCDC38-204ENST00000546816 NSFL1CQ9UNZ2 370 aaKnown RBP10.21□□□□□ -0.77
CCDC38-204ENST00000546816 OIP5O43482 229 aa10.2□□□□□ -0.78
CCDC38-204ENST00000546816 UBAP2LQ14157 1087 aaKnown RBP10.2□□□□□ -0.78
CCDC38-204ENST00000546816 PHTF2Q8N3S3 785 aa10.2□□□□□ -0.78
CCDC38-204ENST00000546816 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
CCDC38-204ENST00000546816 ZSCAN10Q96SZ4 725 aaPredicted RBP10.2□□□□□ -0.78
CCDC38-204ENST00000546816 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 ITGB2P05107 769 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 PHKA2P46019 1235 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 MAP2K3P46734 347 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 TBC1D2BQ9UPU7 963 aa10.19□□□□□ -0.78
CCDC38-204ENST00000546816 PLA2G4EQ3MJ16 856 aa10.18□□□□□ -0.78
CCDC38-204ENST00000546816 C4orf17Q53FE4 359 aa10.17□□□□□ -0.78
CCDC38-204ENST00000546816 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
CCDC38-204ENST00000546816 OXCT2Q9BYC2 517 aaPredicted RBP10.17□□□□□ -0.78
CCDC38-204ENST00000546816 IRF5Q13568 498 aa10.16□□□□□ -0.78
CCDC38-204ENST00000546816 LBRQ14739 615 aaKnown RBP10.16□□□□□ -0.78
CCDC38-204ENST00000546816 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
CCDC38-204ENST00000546816 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
CCDC38-204ENST00000546816 GNASQ5JWF2 1037 aa10.16□□□□□ -0.78
CCDC38-204ENST00000546816 CHIC2Q9UKJ5 165 aa10.16□□□□□ -0.78
CCDC38-204ENST00000546816 TMEM214Q6NUQ4 689 aaKnown RBP10.15□□□□□ -0.78
CCDC38-204ENST00000546816 KLRG1Q96E93 195 aa10.15□□□□□ -0.78
CCDC38-204ENST00000546816 ETNK1Q9HBU6 452 aa10.15□□□□□ -0.78
CCDC38-204ENST00000546816 STAU1O95793 577 aaKnown RBP10.14□□□□□ -0.79
CCDC38-204ENST00000546816 MSX1P28360 303 aa10.14□□□□□ -0.79
CCDC38-204ENST00000546816 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC38-204ENST00000546816 USP4Q13107 963 aa10.14□□□□□ -0.79
CCDC38-204ENST00000546816 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
CCDC38-204ENST00000546816 DOLKQ9UPQ8 538 aa10.14□□□□□ -0.79
CCDC38-204ENST00000546816 PHF24Q9UPV7 400 aa10.14□□□□□ -0.79
CCDC38-204ENST00000546816 SHISA8B8ZZ34 492 aa10.13□□□□□ -0.79
CCDC38-204ENST00000546816 PPARGC1BQ86YN6 1023 aaKnown RBP10.13□□□□□ -0.79
CCDC38-204ENST00000546816 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
CCDC38-204ENST00000546816 RUBCNLQ9H714 662 aa10.13□□□□□ -0.79
CCDC38-204ENST00000546816 MSTNO14793 375 aa10.12□□□□□ -0.79
CCDC38-204ENST00000546816 GTF2E1P29083 439 aaPredicted RBP10.12□□□□□ -0.79
CCDC38-204ENST00000546816 SNRPNP63162 240 aaKnown RBP10.12□□□□□ -0.79
CCDC38-204ENST00000546816 RHBDD1Q8TEB9 315 aa10.12□□□□□ -0.79
CCDC38-204ENST00000546816 NDFIP2Q9NV92 336 aa10.12□□□□□ -0.79
CCDC38-204ENST00000546816 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
CCDC38-204ENST00000546816 RNF135Q8IUD6 432 aa10.11□□□□□ -0.79
CCDC38-204ENST00000546816 ATXN7L1Q9ULK2 861 aaPredicted RBP10.11□□□□□ -0.79
CCDC38-204ENST00000546816 C2CD2LO14523 706 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 PROCP04070 461 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 CSB-PGBD3P0DP91 1061 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 GALNT6Q8NCL4 622 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
CCDC38-204ENST00000546816 GDF2Q9UK05 429 aaPredicted RBP10.1□□□□□ -0.79
CCDC38-204ENST00000546816 SCNN1DP51172 638 aa10.09□□□□□ -0.79
CCDC38-204ENST00000546816 TLR1Q15399 786 aa10.09□□□□□ -0.79
CCDC38-204ENST00000546816 EFHC2Q5JST6 749 aa10.09□□□□□ -0.79
CCDC38-204ENST00000546816 PRM3Q9NNZ6 103 aa10.09□□□□□ -0.79
CCDC38-204ENST00000546816 BNIP3LO60238 219 aa10.08□□□□□ -0.8
CCDC38-204ENST00000546816 OXLD1Q5BKU9 147 aa10.08□□□□□ -0.8
CCDC38-204ENST00000546816 EDARADDQ8WWZ3 215 aa10.08□□□□□ -0.8
CCDC38-204ENST00000546816 ABHD17AQ96GS6 310 aa10.08□□□□□ -0.8
CCDC38-204ENST00000546816 VAC14Q08AM6 782 aa10.07□□□□□ -0.8
CCDC38-204ENST00000546816 GOLGA6L1Q8N7Z2 621 aa10.07□□□□□ -0.8
CCDC38-204ENST00000546816 SIRT1Q96EB6 747 aa10.07□□□□□ -0.8
CCDC38-204ENST00000546816 INHAP05111 366 aa10.06□□□□□ -0.8
CCDC38-204ENST00000546816 HOXB4P17483 251 aaPredicted RBP10.06□□□□□ -0.8
CCDC38-204ENST00000546816 FGFR3P22607 806 aa10.06□□□□□ -0.8
CCDC38-204ENST00000546816 CTBSQ01459 385 aa10.06□□□□□ -0.8
CCDC38-204ENST00000546816 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
CCDC38-204ENST00000546816 MKL2Q9ULH7 1088 aa10.06□□□□□ -0.8
CCDC38-204ENST00000546816 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
CCDC38-204ENST00000546816 ADAM23O75077 832 aa10.05□□□□□ -0.8
CCDC38-204ENST00000546816 BMP4P12644 408 aa10.05□□□□□ -0.8
CCDC38-204ENST00000546816 GDF10P55107 478 aa10.05□□□□□ -0.8
CCDC38-204ENST00000546816 ATP4AP20648 1035 aa10.04□□□□□ -0.8
CCDC38-204ENST00000546816 COL8A1P27658 744 aa10.04□□□□□ -0.8
CCDC38-204ENST00000546816 PLA2G4AP47712 749 aa10.04□□□□□ -0.8
CCDC38-204ENST00000546816 SLCO4C1Q6ZQN7 724 aa10.04□□□□□ -0.8
CCDC38-204ENST00000546816 TBC1D9Q6ZT07 1266 aa10.04□□□□□ -0.8
CCDC38-204ENST00000546816 MAP7D1Q3KQU3 841 aa10.03□□□□□ -0.8
CCDC38-204ENST00000546816 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
CCDC38-204ENST00000546816 ALYREFQ86V81 257 aaKnown RBP10.03□□□□□ -0.8
CCDC38-204ENST00000546816 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
CCDC38-204ENST00000546816 ZCCHC2Q9C0B9 1178 aaKnown RBP10.03□□□□□ -0.8
CCDC38-204ENST00000546816 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
CCDC38-204ENST00000546816 GGA1Q9UJY5 639 aa10.03□□□□□ -0.8
CCDC38-204ENST00000546816 SMTNP53814 917 aa10.02□□□□□ -0.81
CCDC38-204ENST00000546816 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
CCDC38-204ENST00000546816 C1orf216Q8TAB5 229 aa10.02□□□□□ -0.81
CCDC38-204ENST00000546816 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 FIGNL1Q6PIW4 674 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 NLRP8Q86W28 1048 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 NIFKQ9BYG3 293 aaKnown RBP10.01□□□□□ -0.81
CCDC38-204ENST00000546816 RRAGCQ9HB90 399 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 PCDHGC4Q9Y5F7 938 aa10.01□□□□□ -0.81
CCDC38-204ENST00000546816 ARAFP10398 606 aa10□□□□□ -0.81
CCDC38-204ENST00000546816 ABL2P42684 1182 aa10□□□□□ -0.81
CCDC38-204ENST00000546816 SLC4A9Q96Q91 983 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms