RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TOGARAM1Q9Y4F4 1720 aa15.81■□□□□ 0.12
LTBR-214ENST00000545445 COL3A1P02461 1466 aaPredicted RBP15.8■□□□□ 0.12
LTBR-214ENST00000545445 APLP1P51693 650 aa15.8■□□□□ 0.12
LTBR-214ENST00000545445 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
LTBR-214ENST00000545445 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
LTBR-214ENST00000545445 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
LTBR-214ENST00000545445 MPRIPQ6WCQ1 1025 aa15.79■□□□□ 0.12
LTBR-214ENST00000545445 RAPGEF4Q8WZA2 1011 aa15.79■□□□□ 0.12
LTBR-214ENST00000545445 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
LTBR-214ENST00000545445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.78■□□□□ 0.12
LTBR-214ENST00000545445 MIER1Q8N108 512 aa15.78■□□□□ 0.12
LTBR-214ENST00000545445 EYA1Q99502 592 aa15.78■□□□□ 0.12
LTBR-214ENST00000545445 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
LTBR-214ENST00000545445 PCDH11XQ9BZA7 1347 aa15.77■□□□□ 0.12
LTBR-214ENST00000545445 PCDH11YQ9BZA8 1340 aa15.77■□□□□ 0.12
LTBR-214ENST00000545445 TAF1LQ8IZX4 1826 aa15.77■□□□□ 0.11
LTBR-214ENST00000545445 U2SURPO15042 1029 aaKnown RBP15.76■□□□□ 0.11
LTBR-214ENST00000545445 TATP17735 454 aaPredicted RBP15.76■□□□□ 0.11
LTBR-214ENST00000545445 DNAJC5GQ8N7S2 189 aa15.76■□□□□ 0.11
LTBR-214ENST00000545445 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
LTBR-214ENST00000545445 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
LTBR-214ENST00000545445 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
LTBR-214ENST00000545445 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
LTBR-214ENST00000545445 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
LTBR-214ENST00000545445 CYP27B1O15528 508 aa15.74■□□□□ 0.11
LTBR-214ENST00000545445 TOMM70O94826 608 aa15.74■□□□□ 0.11
LTBR-214ENST00000545445 U2AF1L5P0DN76 240 aaPredicted RBP15.74■□□□□ 0.11
LTBR-214ENST00000545445 U2AF1Q01081 240 aaKnown RBP eCLIP15.74■□□□□ 0.11
LTBR-214ENST00000545445 KDRP35968 1356 aa15.74■□□□□ 0.11
LTBR-214ENST00000545445 UBR3Q6ZT12 1888 aa15.74■□□□□ 0.11
LTBR-214ENST00000545445 FCHSD2O94868 740 aa15.73■□□□□ 0.11
LTBR-214ENST00000545445 HMGB2P26583 209 aaKnown RBP15.73■□□□□ 0.11
LTBR-214ENST00000545445 SSFA2P28290 1259 aa15.73■□□□□ 0.11
LTBR-214ENST00000545445 SULT6B1Q6IMI4 303 aa15.73■□□□□ 0.11
LTBR-214ENST00000545445 LINC00116Q8NCU8 138 aa15.73■□□□□ 0.11
LTBR-214ENST00000545445 SMARCC1Q92922 1105 aaPredicted RBP15.73■□□□□ 0.11
LTBR-214ENST00000545445 NMRK2Q9NPI5 230 aa15.73■□□□□ 0.11
LTBR-214ENST00000545445 HTRA3P83110 453 aa15.72■□□□□ 0.11
LTBR-214ENST00000545445 CCDC184Q52MB2 194 aa15.72■□□□□ 0.11
LTBR-214ENST00000545445 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
LTBR-214ENST00000545445 CAPN15O75808 1086 aa15.71■□□□□ 0.11
LTBR-214ENST00000545445 MMP10P09238 476 aa15.71■□□□□ 0.11
LTBR-214ENST00000545445 PIGBQ92521 554 aa15.71■□□□□ 0.11
LTBR-214ENST00000545445 GNPATO15228 680 aa15.7■□□□□ 0.1
LTBR-214ENST00000545445 NEFMP07197 916 aa15.7■□□□□ 0.1
LTBR-214ENST00000545445 COL13A1Q5TAT6 717 aaPredicted RBP15.7■□□□□ 0.1
LTBR-214ENST00000545445 BCS1LQ9Y276 419 aa15.7■□□□□ 0.1
LTBR-214ENST00000545445 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
LTBR-214ENST00000545445 KIAA1551Q9HCM1 1747 aa15.69■□□□□ 0.1
LTBR-214ENST00000545445 LOC102724428A0A0B4J2F2 783 aa15.69■□□□□ 0.1
LTBR-214ENST00000545445 HMOX1P09601 288 aa15.69■□□□□ 0.1
LTBR-214ENST00000545445 SIK1P57059 783 aa15.69■□□□□ 0.1
LTBR-214ENST00000545445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
LTBR-214ENST00000545445 A0A0G2JLW4 131 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 ITPK1Q13572 414 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 AMOTQ4VCS5 1084 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 AEBP1Q8IUX7 1158 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 RSPH6AQ9H0K4 717 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 ADAMTS8Q9UP79 889 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 C10orf71Q711Q0 1435 aa15.68■□□□□ 0.1
LTBR-214ENST00000545445 ITGB4P16144 1822 aa15.67■□□□□ 0.1
LTBR-214ENST00000545445 KLRG1Q96E93 195 aa15.67■□□□□ 0.1
LTBR-214ENST00000545445 PKD1L3Q7Z443 1732 aa15.66■□□□□ 0.1
LTBR-214ENST00000545445 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
LTBR-214ENST00000545445 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
LTBR-214ENST00000545445 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
LTBR-214ENST00000545445 SPG7Q9UQ90 795 aa15.66■□□□□ 0.1
LTBR-214ENST00000545445 N4BP2Q86UW6 1770 aaPredicted RBP15.65■□□□□ 0.1
LTBR-214ENST00000545445 ASAP1Q9ULH1 1129 aa15.65■□□□□ 0.1
LTBR-214ENST00000545445 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
LTBR-214ENST00000545445 DPEP1P16444 411 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 ATP6V1AP38606 617 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 TGFB2P61812 414 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
LTBR-214ENST00000545445 FAM9BQ8IZU0 186 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 JMYQ8N9B5 988 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 RUNDC1Q96C34 613 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 PLEKHF1Q96S99 279 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 KIF13BQ9NQT8 1826 aa15.64■□□□□ 0.09
LTBR-214ENST00000545445 NKX1-1Q15270 411 aaPredicted RBP15.63■□□□□ 0.09
LTBR-214ENST00000545445 TNS4Q8IZW8 715 aa15.63■□□□□ 0.09
LTBR-214ENST00000545445 GAS2L2Q8NHY3 880 aa15.63■□□□□ 0.09
LTBR-214ENST00000545445 KCPQ6ZWJ8 1503 aa15.63■□□□□ 0.09
LTBR-214ENST00000545445 FSTL1Q12841 308 aa15.61■□□□□ 0.09
LTBR-214ENST00000545445 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
LTBR-214ENST00000545445 C4AP0C0L4 1744 aa15.6■□□□□ 0.09
LTBR-214ENST00000545445 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
LTBR-214ENST00000545445 NLGN1Q8N2Q7 840 aa15.6■□□□□ 0.09
LTBR-214ENST00000545445 PHACTR3Q96KR7 559 aa15.6■□□□□ 0.09
LTBR-214ENST00000545445 ATG3Q9NT62 314 aa15.6■□□□□ 0.09
LTBR-214ENST00000545445 RTCBQ9Y3I0 505 aaKnown RBP15.6■□□□□ 0.09
LTBR-214ENST00000545445 HSP90AB1P08238 724 aaKnown RBP15.59■□□□□ 0.09
LTBR-214ENST00000545445 MTHFSDQ2M296 383 aaKnown RBP15.59■□□□□ 0.09
LTBR-214ENST00000545445 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
LTBR-214ENST00000545445 TRAPPC3LQ5T215 181 aa15.59■□□□□ 0.09
LTBR-214ENST00000545445 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
LTBR-214ENST00000545445 PCNTO95613 3336 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms