RNA–Protein interactions for RNA: ENST00000545065.1

KNTC1-214, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-214ENST00000545065 PIM2Q9P1W9 311 aa12.15□□□□□ -0.46
KNTC1-214ENST00000545065 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
KNTC1-214ENST00000545065 PLEKHG3A1L390 1219 aa12.14□□□□□ -0.47
KNTC1-214ENST00000545065 LMNB1P20700 586 aa12.14□□□□□ -0.47
KNTC1-214ENST00000545065 RGL3Q3MIN7 710 aa12.14□□□□□ -0.47
KNTC1-214ENST00000545065 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
KNTC1-214ENST00000545065 VCANP13611 3396 aa12.14□□□□□ -0.47
KNTC1-214ENST00000545065 NFAT5O94916 1531 aa12.13□□□□□ -0.47
KNTC1-214ENST00000545065 AOC2O75106 756 aa12.13□□□□□ -0.47
KNTC1-214ENST00000545065 CYP4F22Q6NT55 531 aa12.13□□□□□ -0.47
KNTC1-214ENST00000545065 GPR101Q96P66 508 aaPredicted RBP12.13□□□□□ -0.47
KNTC1-214ENST00000545065 USP47Q96K76 1375 aa12.13□□□□□ -0.47
KNTC1-214ENST00000545065 SCN4AP35499 1836 aa12.12□□□□□ -0.47
KNTC1-214ENST00000545065 BRCA2P51587 3418 aa12.12□□□□□ -0.47
KNTC1-214ENST00000545065 MNX1P50219 401 aaPredicted RBP12.12□□□□□ -0.47
KNTC1-214ENST00000545065 NLRP6P59044 892 aa12.12□□□□□ -0.47
KNTC1-214ENST00000545065 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
KNTC1-214ENST00000545065 AK7Q96M32 723 aa12.11□□□□□ -0.47
KNTC1-214ENST00000545065 TRAK1Q9UPV9 953 aa12.11□□□□□ -0.47
KNTC1-214ENST00000545065 SSFA2P28290 1259 aa12.1□□□□□ -0.47
KNTC1-214ENST00000545065 CHRNA5P30532 468 aa12.1□□□□□ -0.47
KNTC1-214ENST00000545065 ABT1Q9ULW3 272 aaKnown RBP12.09□□□□□ -0.47
KNTC1-214ENST00000545065 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
KNTC1-214ENST00000545065 SPTBN5Q9NRC6 3674 aaKnown RBP12.09□□□□□ -0.47
KNTC1-214ENST00000545065 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 NFKBIEO00221 500 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 GRM1Q13255 1194 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 CCDC87Q9NVE4 849 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 NLRP2Q9NX02 1062 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 CACNA1AO00555 2505 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 TRPM7Q96QT4 1865 aa12.08□□□□□ -0.48
KNTC1-214ENST00000545065 DLEC1Q9Y238 1755 aa12.07□□□□□ -0.48
KNTC1-214ENST00000545065 DDNO94850 711 aaPredicted RBP12.07□□□□□ -0.48
KNTC1-214ENST00000545065 FMR1Q06787 632 aaKnown RBP eCLIP12.07□□□□□ -0.48
KNTC1-214ENST00000545065 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
KNTC1-214ENST00000545065 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
KNTC1-214ENST00000545065 CA12O43570 354 aa12.06□□□□□ -0.48
KNTC1-214ENST00000545065 LINC00116Q8NCU8 138 aa12.06□□□□□ -0.48
KNTC1-214ENST00000545065 CDK19Q9BWU1 502 aa12.06□□□□□ -0.48
KNTC1-214ENST00000545065 TAF1DQ9H5J8 278 aaPredicted RBP12.06□□□□□ -0.48
KNTC1-214ENST00000545065 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
KNTC1-214ENST00000545065 ITGB4P16144 1822 aa12.05□□□□□ -0.48
KNTC1-214ENST00000545065 MAP2K2P36507 400 aa12.05□□□□□ -0.48
KNTC1-214ENST00000545065 DPY19L2Q6NUT2 758 aa12.05□□□□□ -0.48
KNTC1-214ENST00000545065 SOX12O15370 315 aa12.04□□□□□ -0.48
KNTC1-214ENST00000545065 ECE1P42892 770 aa12.04□□□□□ -0.48
KNTC1-214ENST00000545065 LTN1O94822 1766 aa12.04□□□□□ -0.48
KNTC1-214ENST00000545065 FAM208AQ9UK61 1670 aaKnown RBP12.03□□□□□ -0.48
KNTC1-214ENST00000545065 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
KNTC1-214ENST00000545065 PAXIP1Q6ZW49 1069 aaPredicted RBP12.03□□□□□ -0.48
KNTC1-214ENST00000545065 LAMA3Q16787 3333 aa12.03□□□□□ -0.48
KNTC1-214ENST00000545065 SCN11AQ9UI33 1791 aa12.02□□□□□ -0.48
KNTC1-214ENST00000545065 CNTROBQ8N137 903 aa12.02□□□□□ -0.49
KNTC1-214ENST00000545065 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
KNTC1-214ENST00000545065 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.49
KNTC1-214ENST00000545065 ZIC5Q96T25 663 aa12.01□□□□□ -0.49
KNTC1-214ENST00000545065 DDX21Q9NR30 783 aaKnown RBP eCLIP12.01□□□□□ -0.49
KNTC1-214ENST00000545065 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 GNPATO15228 680 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 GYS1P13807 737 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 BRPF1P55201 1214 aaPredicted RBP12□□□□□ -0.49
KNTC1-214ENST00000545065 TMF1P82094 1093 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 CIAPIN1Q6FI81 312 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
KNTC1-214ENST00000545065 HTTP42858 3142 aa12□□□□□ -0.49
KNTC1-214ENST00000545065 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
KNTC1-214ENST00000545065 EAPPQ56P03 285 aaPredicted RBP11.99□□□□□ -0.49
KNTC1-214ENST00000545065 CST9Q5W186 159 aa11.99□□□□□ -0.49
KNTC1-214ENST00000545065 NLGN1Q8N2Q7 840 aa11.99□□□□□ -0.49
KNTC1-214ENST00000545065 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
KNTC1-214ENST00000545065 DDR1Q08345 913 aa11.98□□□□□ -0.49
KNTC1-214ENST00000545065 ITPK1Q13572 414 aa11.98□□□□□ -0.49
KNTC1-214ENST00000545065 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
KNTC1-214ENST00000545065 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
KNTC1-214ENST00000545065 CENPFP49454 3210 aa11.98□□□□□ -0.49
KNTC1-214ENST00000545065 KCNH5Q8NCM2 988 aa11.97□□□□□ -0.49
KNTC1-214ENST00000545065 ANKRD24Q8TF21 1146 aa11.97□□□□□ -0.49
KNTC1-214ENST00000545065 PARP3Q9Y6F1 533 aa11.97□□□□□ -0.49
KNTC1-214ENST00000545065 AFDNP55196 1824 aaKnown RBP11.97□□□□□ -0.49
KNTC1-214ENST00000545065 TTC28Q96AY4 2481 aa11.97□□□□□ -0.49
KNTC1-214ENST00000545065 IQCA1LA6NCM1 817 aa11.96□□□□□ -0.49
KNTC1-214ENST00000545065 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
KNTC1-214ENST00000545065 PRDM6Q9NQX0 595 aa11.96□□□□□ -0.49
KNTC1-214ENST00000545065 MYH14Q7Z406 1995 aaKnown RBP11.96□□□□□ -0.5
KNTC1-214ENST00000545065 RAPGEFL1Q9UHV5 662 aa11.95□□□□□ -0.5
KNTC1-214ENST00000545065 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
KNTC1-214ENST00000545065 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
KNTC1-214ENST00000545065 CTU1Q7Z7A3 348 aaKnown RBP11.94□□□□□ -0.5
KNTC1-214ENST00000545065 RBBP6Q7Z6E9 1792 aaKnown RBP11.93□□□□□ -0.5
KNTC1-214ENST00000545065 HMGB2P26583 209 aaKnown RBP11.93□□□□□ -0.5
KNTC1-214ENST00000545065 ZCRB1Q8TBF4 217 aaKnown RBP11.93□□□□□ -0.5
KNTC1-214ENST00000545065 MUC3AQ02505 3323 aa11.93□□□□□ -0.5
KNTC1-214ENST00000545065 AKAP11Q9UKA4 1901 aa11.93□□□□□ -0.5
KNTC1-214ENST00000545065 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
KNTC1-214ENST00000545065 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
KNTC1-214ENST00000545065 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
KNTC1-214ENST00000545065 LOC102724428A0A0B4J2F2 783 aa11.91□□□□□ -0.5
KNTC1-214ENST00000545065 TRAF5O00463 557 aa11.91□□□□□ -0.5
KNTC1-214ENST00000545065 COL9A1P20849 921 aa11.91□□□□□ -0.5
KNTC1-214ENST00000545065 EPHX2P34913 555 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms