RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 KCNQ3O43525 872 aa9.07□□□□□ -0.96
HMGCS2-204ENST00000544913 RARSP54136 660 aaKnown RBP9.07□□□□□ -0.96
HMGCS2-204ENST00000544913 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
HMGCS2-204ENST00000544913 USP21Q9UK80 565 aa9.07□□□□□ -0.96
HMGCS2-204ENST00000544913 VAMP4O75379 141 aa9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 BABAM1Q9NWV8 329 aa9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 UBR2Q8IWV8 1755 aa9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 EP400Q96L91 3159 aa9.06□□□□□ -0.96
HMGCS2-204ENST00000544913 BCAR3O75815 825 aa9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 LAS1LQ9Y4W2 734 aaKnown RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 CT47B1P0C2W7 299 aaPredicted RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 MARCH10Q8NA82 808 aaPredicted RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 CDCA7Q9BWT1 371 aaPredicted RBP9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 DOT1LQ8TEK3 1739 aa9.05□□□□□ -0.96
HMGCS2-204ENST00000544913 KCPQ6ZWJ8 1503 aa9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 ITGB4P16144 1822 aa9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 EIF4A1P60842 406 aaKnown RBP9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 FAM98CQ17RN3 349 aaKnown RBP9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 SSH1Q8WYL5 1049 aa9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 GJD4Q96KN9 370 aaPredicted RBP9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 TSPYL4Q9UJ04 414 aa9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 C5P01031 1676 aa9.04□□□□□ -0.96
HMGCS2-204ENST00000544913 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 RGS17Q9UGC6 210 aaPredicted RBP9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 PLIN1O60240 522 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 HSP90AB1P08238 724 aaKnown RBP9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 C20orf194Q5TEA3 1177 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 MEX3CQ5U5Q3 659 aaKnown RBP9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 BCL9O00512 1426 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 RGS12O14924 1447 aa9.03□□□□□ -0.96
HMGCS2-204ENST00000544913 ERVV-2B6SEH9 535 aa9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 ELL2O00472 640 aaPredicted RBP9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 BRPF1P55201 1214 aaPredicted RBP9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 TEFQ10587 303 aa9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 DDB1Q16531 1140 aa9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 TNNQ9UQP3 1299 aa9.02□□□□□ -0.97
HMGCS2-204ENST00000544913 PRAMEF22A3QJZ6 481 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 BTBD11A6QL63 1104 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 EXOC5O00471 708 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 TRPC5Q9UL62 973 aaPredicted RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 CCDC9Q9Y3X0 531 aaKnown RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 ALDH1L2Q3SY69 923 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 ZNF790Q6PG37 636 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 PIGBQ92521 554 aa9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 ZNF496Q96IT1 587 aaPredicted RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 RBM19Q9Y4C8 960 aaKnown RBP9.01□□□□□ -0.97
HMGCS2-204ENST00000544913 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
HMGCS2-204ENST00000544913 RLBP1P12271 317 aa9□□□□□ -0.97
HMGCS2-204ENST00000544913 CACNB1Q02641 598 aaPredicted RBP9□□□□□ -0.97
HMGCS2-204ENST00000544913 ZNF428Q96B54 188 aa9□□□□□ -0.97
HMGCS2-204ENST00000544913 BRWD3Q6RI45 1802 aa9□□□□□ -0.97
HMGCS2-204ENST00000544913 TCERG1O14776 1098 aaKnown RBP8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 PTF1AQ7RTS3 328 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 QTRT2Q9H974 415 aaKnown RBP8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 HOXB7P09629 217 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 CABP4P57796 275 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 ATG3Q9NT62 314 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 SMC4Q9NTJ3 1288 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 LAMB4A4D0S4 1761 aa8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 CICQ96RK0 1608 aaPredicted RBP8.99□□□□□ -0.97
HMGCS2-204ENST00000544913 NHSQ6T4R5 1651 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 SBF2Q86WG5 1849 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 LRP10Q7Z4F1 713 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 ASAP1Q9ULH1 1129 aa8.98□□□□□ -0.97
HMGCS2-204ENST00000544913 TRIM27P14373 513 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 PDIA6Q15084 440 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 G2E3Q7L622 706 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 TJP1Q07157 1748 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 KCNQ2O43526 872 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 PRIM1P49642 420 aaKnown RBP8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 PROSER3Q2NL68 480 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 FAM182BQ5T319 152 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 POTEAQ6S8J7 498 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 TMOD3Q9NYL9 352 aa8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 NOB1Q9ULX3 412 aaKnown RBP8.97□□□□□ -0.97
HMGCS2-204ENST00000544913 CACNA1FO60840 1977 aa8.96□□□□□ -0.97
HMGCS2-204ENST00000544913 PANK1Q8TE04 598 aa8.96□□□□□ -0.97
HMGCS2-204ENST00000544913 ABCC4O15439 1325 aa8.96□□□□□ -0.97
HMGCS2-204ENST00000544913 PDE3AQ14432 1141 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 EXOC6Q8TAG9 804 aa8.95□□□□□ -0.98
HMGCS2-204ENST00000544913 CRBNQ96SW2 442 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms