RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 KDRP35968 1356 aa14.35□□□□□ -0.11
LMO3-230ENST00000544276 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
LMO3-230ENST00000544276 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
LMO3-230ENST00000544276 IL13P35225 146 aa14.34□□□□□ -0.11
LMO3-230ENST00000544276 KIF7Q2M1P5 1343 aa14.34□□□□□ -0.11
LMO3-230ENST00000544276 GNPATO15228 680 aa14.33□□□□□ -0.12
LMO3-230ENST00000544276 PHF14O94880 888 aa14.33□□□□□ -0.12
LMO3-230ENST00000544276 YBX3P16989 372 aaKnown RBP eCLIP14.33□□□□□ -0.12
LMO3-230ENST00000544276 RC3H1Q5TC82 1133 aaKnown RBP14.33□□□□□ -0.12
LMO3-230ENST00000544276 ZNF530Q6P9A1 599 aaPredicted RBP14.33□□□□□ -0.12
LMO3-230ENST00000544276 ITGB4P16144 1822 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 PER1O15534 1290 aaPredicted RBP14.32□□□□□ -0.12
LMO3-230ENST00000544276 MTHFSP49914 203 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 CABP4P57796 275 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 C1orf141Q5JVX7 400 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 PELP1Q8IZL8 1130 aaKnown RBP14.32□□□□□ -0.12
LMO3-230ENST00000544276 SLC4A9Q96Q91 983 aa14.32□□□□□ -0.12
LMO3-230ENST00000544276 KDM6AO15550 1401 aaPredicted RBP14.32□□□□□ -0.12
LMO3-230ENST00000544276 RTCBQ9Y3I0 505 aaKnown RBP14.31□□□□□ -0.12
LMO3-230ENST00000544276 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
LMO3-230ENST00000544276 TAF1LQ8IZX4 1826 aa14.31□□□□□ -0.12
LMO3-230ENST00000544276 TRAPPC3LQ5T215 181 aa14.3□□□□□ -0.12
LMO3-230ENST00000544276 SMIM5Q71RC9 77 aa14.3□□□□□ -0.12
LMO3-230ENST00000544276 NLGN1Q8N2Q7 840 aa14.29□□□□□ -0.12
LMO3-230ENST00000544276 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
LMO3-230ENST00000544276 ZNF831Q5JPB2 1677 aa14.29□□□□□ -0.12
LMO3-230ENST00000544276 RPS6KA4O75676 772 aa14.28□□□□□ -0.12
LMO3-230ENST00000544276 AKAP4Q5JQC9 854 aa14.28□□□□□ -0.12
LMO3-230ENST00000544276 NFATC2IPQ8NCF5 419 aa14.28□□□□□ -0.12
LMO3-230ENST00000544276 NPC1L1Q9UHC9 1359 aa14.28□□□□□ -0.12
LMO3-230ENST00000544276 UBR3Q6ZT12 1888 aa14.27□□□□□ -0.12
LMO3-230ENST00000544276 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
LMO3-230ENST00000544276 MMP10P09238 476 aa14.26□□□□□ -0.13
LMO3-230ENST00000544276 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
LMO3-230ENST00000544276 CHD4Q14839 1912 aa14.25□□□□□ -0.13
LMO3-230ENST00000544276 RFC4P35249 363 aa14.25□□□□□ -0.13
LMO3-230ENST00000544276 TGFB2P61812 414 aa14.25□□□□□ -0.13
LMO3-230ENST00000544276 DIAPH1O60610 1272 aaKnown RBP14.24□□□□□ -0.13
LMO3-230ENST00000544276 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
LMO3-230ENST00000544276 GIGYF1O75420 1035 aaPredicted RBP14.24□□□□□ -0.13
LMO3-230ENST00000544276 GYS1P13807 737 aa14.24□□□□□ -0.13
LMO3-230ENST00000544276 SLC52A2Q9HAB3 445 aa14.24□□□□□ -0.13
LMO3-230ENST00000544276 CRKLP46109 303 aaKnown RBP14.23□□□□□ -0.13
LMO3-230ENST00000544276 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
LMO3-230ENST00000544276 ADCY9O60503 1353 aa14.22□□□□□ -0.13
LMO3-230ENST00000544276 MRC1P22897 1456 aa14.21□□□□□ -0.13
LMO3-230ENST00000544276 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
LMO3-230ENST00000544276 HMOX1P09601 288 aa14.21□□□□□ -0.13
LMO3-230ENST00000544276 LGR6Q9HBX8 967 aa14.21□□□□□ -0.13
LMO3-230ENST00000544276 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
LMO3-230ENST00000544276 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
LMO3-230ENST00000544276 USP42Q9H9J4 1324 aaKnown RBP14.2□□□□□ -0.14
LMO3-230ENST00000544276 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
LMO3-230ENST00000544276 CICQ96RK0 1608 aaPredicted RBP14.2□□□□□ -0.14
LMO3-230ENST00000544276 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
LMO3-230ENST00000544276 INTS5Q6P9B9 1019 aaKnown RBP14.2□□□□□ -0.14
LMO3-230ENST00000544276 VSIG10Q8N0Z9 540 aa14.2□□□□□ -0.14
LMO3-230ENST00000544276 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
LMO3-230ENST00000544276 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
LMO3-230ENST00000544276 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
LMO3-230ENST00000544276 SENP3-EIF4A1A0A087X0R7 540 aa14.17□□□□□ -0.14
LMO3-230ENST00000544276 CYP19A1P11511 503 aaPredicted RBP14.17□□□□□ -0.14
LMO3-230ENST00000544276 FKBP8Q14318 412 aa14.17□□□□□ -0.14
LMO3-230ENST00000544276 DNAJC10Q8IXB1 793 aa14.17□□□□□ -0.14
LMO3-230ENST00000544276 GPBP1L1Q9HC44 474 aaPredicted RBP14.17□□□□□ -0.14
LMO3-230ENST00000544276 COL3A1P02461 1466 aaPredicted RBP14.17□□□□□ -0.14
LMO3-230ENST00000544276 SOS1Q07889 1333 aaPredicted RBP14.16□□□□□ -0.14
LMO3-230ENST00000544276 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
LMO3-230ENST00000544276 TM4SF1P30408 202 aa14.16□□□□□ -0.14
LMO3-230ENST00000544276 GAS2L2Q8NHY3 880 aa14.16□□□□□ -0.14
LMO3-230ENST00000544276 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
LMO3-230ENST00000544276 DPEP1P16444 411 aa14.15□□□□□ -0.14
LMO3-230ENST00000544276 KCNA3P22001 575 aa14.15□□□□□ -0.14
LMO3-230ENST00000544276 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
LMO3-230ENST00000544276 SRP68Q9UHB9 627 aaKnown RBP14.15□□□□□ -0.14
LMO3-230ENST00000544276 KIF13BQ9NQT8 1826 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
LMO3-230ENST00000544276 ZPR1O75312 459 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 DDR1Q08345 913 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 WWC3Q9ULE0 1092 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 KCPQ6ZWJ8 1503 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
LMO3-230ENST00000544276 TJP1Q07157 1748 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 GNAT3A8MTJ3 354 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
LMO3-230ENST00000544276 STARD3NLO95772 234 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 IL17REQ8NFR9 667 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 TEX13AQ9BXU3 409 aaPredicted RBP14.13□□□□□ -0.15
LMO3-230ENST00000544276 PIM2Q9P1W9 311 aa14.13□□□□□ -0.15
LMO3-230ENST00000544276 FCHSD2O94868 740 aa14.12□□□□□ -0.15
LMO3-230ENST00000544276 USPL1Q5W0Q7 1092 aa14.12□□□□□ -0.15
LMO3-230ENST00000544276 ZNF790Q6PG37 636 aa14.12□□□□□ -0.15
LMO3-230ENST00000544276 TTC5Q8N0Z6 440 aa14.12□□□□□ -0.15
LMO3-230ENST00000544276 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms