RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
C2CD3-219ENST00000542930 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
C2CD3-219ENST00000542930 CCDC87Q9NVE4 849 aa13.33□□□□□ -0.28
C2CD3-219ENST00000542930 KCNA3P22001 575 aa13.32□□□□□ -0.28
C2CD3-219ENST00000542930 TMF1P82094 1093 aa13.32□□□□□ -0.28
C2CD3-219ENST00000542930 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
C2CD3-219ENST00000542930 ITGB4P16144 1822 aa13.32□□□□□ -0.28
C2CD3-219ENST00000542930 ITPK1Q13572 414 aa13.31□□□□□ -0.28
C2CD3-219ENST00000542930 RRS1Q15050 365 aaKnown RBP13.31□□□□□ -0.28
C2CD3-219ENST00000542930 NKX1-1Q15270 411 aaPredicted RBP13.31□□□□□ -0.28
C2CD3-219ENST00000542930 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
C2CD3-219ENST00000542930 RNF181Q9P0P0 153 aa13.31□□□□□ -0.28
C2CD3-219ENST00000542930 ATP6V1AP38606 617 aa13.3□□□□□ -0.28
C2CD3-219ENST00000542930 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
C2CD3-219ENST00000542930 BRCA1P38398 1863 aaKnown RBP13.29□□□□□ -0.28
C2CD3-219ENST00000542930 TNRC6CQ9HCJ0 1690 aaKnown RBP13.29□□□□□ -0.28
C2CD3-219ENST00000542930 DCAF5Q96JK2 942 aa13.29□□□□□ -0.28
C2CD3-219ENST00000542930 ASAP1Q9ULH1 1129 aa13.29□□□□□ -0.28
C2CD3-219ENST00000542930 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
C2CD3-219ENST00000542930 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
C2CD3-219ENST00000542930 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
C2CD3-219ENST00000542930 HSP90AB2PQ58FF8 381 aa13.28□□□□□ -0.28
C2CD3-219ENST00000542930 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
C2CD3-219ENST00000542930 TMOD3Q9NYL9 352 aa13.28□□□□□ -0.28
C2CD3-219ENST00000542930 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
C2CD3-219ENST00000542930 INSRP06213 1382 aa13.28□□□□□ -0.28
C2CD3-219ENST00000542930 GYS1P13807 737 aa13.27□□□□□ -0.29
C2CD3-219ENST00000542930 ADRA2BP18089 450 aa13.27□□□□□ -0.29
C2CD3-219ENST00000542930 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
C2CD3-219ENST00000542930 CARD11Q9BXL7 1154 aa13.27□□□□□ -0.29
C2CD3-219ENST00000542930 ZC3H4Q9UPT8 1303 aaKnown RBP13.27□□□□□ -0.29
C2CD3-219ENST00000542930 C4AP0C0L4 1744 aa13.27□□□□□ -0.29
C2CD3-219ENST00000542930 VEGFAP15692 232 aaPredicted RBP13.26□□□□□ -0.29
C2CD3-219ENST00000542930 SPG7Q9UQ90 795 aa13.26□□□□□ -0.29
C2CD3-219ENST00000542930 FLT4P35916 1363 aa13.25□□□□□ -0.29
C2CD3-219ENST00000542930 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
C2CD3-219ENST00000542930 RFC4P35249 363 aa13.25□□□□□ -0.29
C2CD3-219ENST00000542930 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
C2CD3-219ENST00000542930 ATG3Q9NT62 314 aa13.25□□□□□ -0.29
C2CD3-219ENST00000542930 GLTPD2A6NH11 291 aa13.24□□□□□ -0.29
C2CD3-219ENST00000542930 FYB1O15117 783 aa13.24□□□□□ -0.29
C2CD3-219ENST00000542930 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
C2CD3-219ENST00000542930 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.29
C2CD3-219ENST00000542930 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
C2CD3-219ENST00000542930 SBF1O95248 1867 aa13.23□□□□□ -0.29
C2CD3-219ENST00000542930 KDRP35968 1356 aa13.22□□□□□ -0.29
C2CD3-219ENST00000542930 CNTNAP4Q9C0A0 1308 aa13.22□□□□□ -0.29
C2CD3-219ENST00000542930 RPS6KA4O75676 772 aa13.22□□□□□ -0.29
C2CD3-219ENST00000542930 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
C2CD3-219ENST00000542930 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
C2CD3-219ENST00000542930 LMNB1P20700 586 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
C2CD3-219ENST00000542930 PHKG2P15735 406 aa13.2□□□□□ -0.3
C2CD3-219ENST00000542930 CHRNA5P30532 468 aa13.2□□□□□ -0.3
C2CD3-219ENST00000542930 RBM42Q9BTD8 480 aaKnown RBP13.2□□□□□ -0.3
C2CD3-219ENST00000542930 TONSLQ96HA7 1378 aa13.2□□□□□ -0.3
C2CD3-219ENST00000542930 ZNF831Q5JPB2 1677 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 FOXN1O15353 648 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 RASSF7Q02833 373 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 TESK2Q96S53 571 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 CREBZFQ9NS37 354 aa13.19□□□□□ -0.3
C2CD3-219ENST00000542930 DDR1Q08345 913 aa13.18□□□□□ -0.3
C2CD3-219ENST00000542930 USP42Q9H9J4 1324 aaKnown RBP13.17□□□□□ -0.3
C2CD3-219ENST00000542930 COL5A3P25940 1745 aaPredicted RBP13.17□□□□□ -0.3
C2CD3-219ENST00000542930 POTECB2RU33 542 aa13.17□□□□□ -0.3
C2CD3-219ENST00000542930 FKBP8Q14318 412 aa13.17□□□□□ -0.3
C2CD3-219ENST00000542930 MKRN1Q9UHC7 482 aaKnown RBP13.17□□□□□ -0.3
C2CD3-219ENST00000542930 ERVV-2B6SEH9 535 aa13.16□□□□□ -0.3
C2CD3-219ENST00000542930 SRP68Q9UHB9 627 aaKnown RBP13.16□□□□□ -0.3
C2CD3-219ENST00000542930 EMILIN1Q9Y6C2 1016 aa13.16□□□□□ -0.3
C2CD3-219ENST00000542930 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.3
C2CD3-219ENST00000542930 CTCFP49711 727 aaPredicted RBP13.15□□□□□ -0.3
C2CD3-219ENST00000542930 DPY19L2Q6NUT2 758 aa13.15□□□□□ -0.3
C2CD3-219ENST00000542930 EYA1Q99502 592 aa13.15□□□□□ -0.3
C2CD3-219ENST00000542930 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
C2CD3-219ENST00000542930 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
C2CD3-219ENST00000542930 TM4SF1P30408 202 aa13.14□□□□□ -0.31
C2CD3-219ENST00000542930 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
C2CD3-219ENST00000542930 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
C2CD3-219ENST00000542930 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
C2CD3-219ENST00000542930 CNTNAP1P78357 1384 aa13.13□□□□□ -0.31
C2CD3-219ENST00000542930 PPM1GO15355 546 aaPredicted RBP13.13□□□□□ -0.31
C2CD3-219ENST00000542930 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
C2CD3-219ENST00000542930 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
C2CD3-219ENST00000542930 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
C2CD3-219ENST00000542930 TTLL6Q8N841 843 aa13.12□□□□□ -0.31
C2CD3-219ENST00000542930 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
C2CD3-219ENST00000542930 NFKBIEO00221 500 aa13.11□□□□□ -0.31
C2CD3-219ENST00000542930 ABHD8Q96I13 439 aa13.11□□□□□ -0.31
C2CD3-219ENST00000542930 PTCD1O75127 700 aaKnown RBP13.1□□□□□ -0.31
C2CD3-219ENST00000542930 ZPR1O75312 459 aa13.1□□□□□ -0.31
C2CD3-219ENST00000542930 LBX1P52954 281 aa13.1□□□□□ -0.31
C2CD3-219ENST00000542930 CABP4P57796 275 aa13.1□□□□□ -0.31
C2CD3-219ENST00000542930 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
C2CD3-219ENST00000542930 KIF20BQ96Q89 1820 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms