RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 TAF4BQ92750 862 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 CENPHQ9H3R5 247 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 C11orf95C9JLR9 678 aaPredicted RBP15.33■□□□□ 0.04
TNC-212ENST00000542877 FAM193AP78312 1265 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 LIMCH1Q9UPQ0 1083 aa15.33■□□□□ 0.04
TNC-212ENST00000542877 NEMFO60524 1076 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 ZNF397Q8NF99 534 aaPredicted RBP15.32■□□□□ 0.04
TNC-212ENST00000542877 ATP2B2Q01814 1243 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 STRN4Q9NRL3 753 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 WWC2Q6AWC2 1192 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 TOM1L2Q6ZVM7 507 aa15.32■□□□□ 0.04
TNC-212ENST00000542877 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
TNC-212ENST00000542877 CRACR2AQ9BSW2 395 aa15.31■□□□□ 0.04
TNC-212ENST00000542877 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
TNC-212ENST00000542877 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
TNC-212ENST00000542877 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
TNC-212ENST00000542877 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
TNC-212ENST00000542877 CLIP2Q9UDT6 1046 aa15.31■□□□□ 0.04
TNC-212ENST00000542877 NCOA1Q15788 1441 aa15.31■□□□□ 0.04
TNC-212ENST00000542877 EPRSP07814 1512 aaKnown RBP15.31■□□□□ 0.04
TNC-212ENST00000542877 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
TNC-212ENST00000542877 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
TNC-212ENST00000542877 LARP1Q6PKG0 1096 aaKnown RBP15.3■□□□□ 0.04
TNC-212ENST00000542877 RAI14Q9P0K7 980 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 KIF5CO60282 957 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
TNC-212ENST00000542877 MCM10Q7L590 875 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 DDX54Q8TDD1 881 aaKnown RBP15.3■□□□□ 0.04
TNC-212ENST00000542877 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 SSBP05455 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNC-212ENST00000542877 MAP9Q49MG5 647 aa15.3■□□□□ 0.04
TNC-212ENST00000542877 ERICH4A6NGS2 130 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 MCM3P25205 808 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 XPCQ01831 940 aaPredicted RBP15.29■□□□□ 0.04
TNC-212ENST00000542877 TOP1P11387 765 aaKnown RBP15.29■□□□□ 0.04
TNC-212ENST00000542877 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 SKAP1Q86WV1 359 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 JAKMIP3Q5VZ66 844 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 CCDC196A0A1B0GTZ2 297 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
TNC-212ENST00000542877 CASQ1P31415 396 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
TNC-212ENST00000542877 PTPRCP08575 1304 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 TRIM27P14373 513 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 SPA17Q15506 151 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
TNC-212ENST00000542877 MIS18AQ9NYP9 233 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 KCNH5Q8NCM2 988 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
TNC-212ENST00000542877 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.04
TNC-212ENST00000542877 GSDMDP57764 484 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 UVSSAQ2YD98 709 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 TNNT1P13805 278 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 IGHMBP2P38935 993 aaKnown RBP15.27■□□□□ 0.04
TNC-212ENST00000542877 TBC1D32Q96NH3 1257 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 PLCD4Q9BRC7 762 aa15.27■□□□□ 0.04
TNC-212ENST00000542877 SEPT11Q9NVA2 429 aaKnown RBP15.27■□□□□ 0.04
TNC-212ENST00000542877 KLHL40Q2TBA0 621 aa15.27■□□□□ 0.03
TNC-212ENST00000542877 PHF23Q9BUL5 403 aaPredicted RBP15.26■□□□□ 0.03
TNC-212ENST00000542877 KIF4BQ2VIQ3 1234 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 SHTN1A0MZ66 631 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 ANKRD62A6NC57 917 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
TNC-212ENST00000542877 CBX1P83916 185 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 METTL24Q5JXM2 366 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
TNC-212ENST00000542877 CAVIN2O95810 425 aa15.25■□□□□ 0.03
TNC-212ENST00000542877 IFIT1P09914 478 aaKnown RBP15.25■□□□□ 0.03
TNC-212ENST00000542877 MAP3K1Q13233 1512 aa15.25■□□□□ 0.03
TNC-212ENST00000542877 CDK13Q14004 1512 aaKnown RBP15.25■□□□□ 0.03
TNC-212ENST00000542877 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
TNC-212ENST00000542877 DCAF8L1A6NGE4 600 aa15.25■□□□□ 0.03
TNC-212ENST00000542877 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
TNC-212ENST00000542877 NSD2O96028 1365 aa15.25■□□□□ 0.03
TNC-212ENST00000542877 STX6O43752 255 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 ZNF287Q9HBT7 754 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
TNC-212ENST00000542877 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 EVI5LQ96CN4 794 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 STX1AQ16623 288 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 ADCY5O95622 1261 aa15.24■□□□□ 0.03
TNC-212ENST00000542877 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 GBP2P32456 591 aaPredicted RBP15.23■□□□□ 0.03
TNC-212ENST00000542877 AMOTQ4VCS5 1084 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 STARD3NLO95772 234 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 NAPBQ9H115 298 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 PRDM11Q9NQV5 511 aa15.23■□□□□ 0.03
TNC-212ENST00000542877 PCF11O94913 1555 aaKnown RBP15.23■□□□□ 0.03
TNC-212ENST00000542877 IL16Q14005 1332 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms