RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SLC10A4Q96EP9 437 aa6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 BCL2L13Q9BXK5 485 aa6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 SLAIN2Q9P270 581 aa6.15□□□□□ -1.42
SFSWAP-211ENST00000542813 ZC3H4Q9UPT8 1303 aaKnown RBP6.15□□□□□ -1.43
SFSWAP-211ENST00000542813 SPINT1O43278 529 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 SERPINB4P48594 390 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 MARSP56192 900 aaKnown RBP6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 PTSQ03393 145 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 CBLBQ13191 982 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 ZBTB33Q86T24 672 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 KCTD15Q96SI1 283 aaPredicted RBP6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 MKRN1Q9UHC7 482 aaKnown RBP6.14□□□□□ -1.43
SFSWAP-211ENST00000542813 RASA1P20936 1047 aa6.13□□□□□ -1.43
SFSWAP-211ENST00000542813 PTK7Q13308 1070 aa6.13□□□□□ -1.43
SFSWAP-211ENST00000542813 NOM1Q5C9Z4 860 aaKnown RBP6.13□□□□□ -1.43
SFSWAP-211ENST00000542813 BIN2Q9UBW5 565 aaPredicted RBP6.13□□□□□ -1.43
SFSWAP-211ENST00000542813 FIGNL2A6NMB9 653 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 ATP5J2-PTCD1G3V325 749 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 HSP90B1P14625 803 aaKnown RBP6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 ATP2B4P23634 1241 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 FAM69CQ0P6D2 419 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 GIPC2Q8TF65 315 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 GPSM3Q9Y4H4 160 aa6.12□□□□□ -1.43
SFSWAP-211ENST00000542813 KRT76Q01546 638 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 PTK2Q05397 1052 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 KCNMA1Q12791 1236 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 NCOA4Q13772 614 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 SLFNL1Q499Z3 407 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 INTS6LQ5JSJ4 861 aaKnown RBP6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 ANKMY2Q8IV38 441 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 CCDC155Q8N6L0 562 aa6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 GPR161Q8N6U8 529 aaKnown RBP6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 CDCA7Q9BWT1 371 aaPredicted RBP6.11□□□□□ -1.43
SFSWAP-211ENST00000542813 SLC35F4A4IF30 521 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 TCF3P15923 654 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 SWI5Q1ZZU3 235 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 CNTNAP3BQ96NU0 1288 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 PUS7Q96PZ0 661 aaKnown RBP6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 OCSTAMPQ9BR26 566 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 CNTNAP3Q9BZ76 1288 aa6.1□□□□□ -1.43
SFSWAP-211ENST00000542813 LZTS3O60299 673 aaPredicted RBP6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 NBPF20Q3BBV1 942 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 RNF135Q8IUD6 432 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 NPAS4Q8IUM7 802 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 PLPP7Q8NBV4 271 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 ADAM32Q8TC27 787 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 ZNF592Q92610 1267 aa6.09□□□□□ -1.43
SFSWAP-211ENST00000542813 CTSOP43234 321 aaPredicted RBP6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 RELBQ01201 579 aa6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 DPYDQ12882 1025 aa6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF326Q5BKZ1 582 aaKnown RBP6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 C1orf216Q8TAB5 229 aa6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 AGBL1Q96MI9 1066 aa6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 COL25A1Q9BXS0 654 aaPredicted RBP6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 CEP126Q9P2H0 1117 aa6.08□□□□□ -1.44
SFSWAP-211ENST00000542813 RNF225M0QZC1 329 aaPredicted RBP6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 ITGA6P23229 1130 aa6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 SCNN1AP37088 669 aa6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 GSK3AP49840 483 aa6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 MCCD1P59942 119 aaPredicted RBP6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 EML3Q32P44 896 aa6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 OGFOD1Q8N543 542 aa6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 INSM2Q96T92 566 aaPredicted RBP6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 POLMQ9NP87 494 aaPredicted RBP6.07□□□□□ -1.44
SFSWAP-211ENST00000542813 NISCHQ9Y2I1 1504 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 CDK11BP21127 795 aaKnown RBP6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 VAMP1P23763 118 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 MAP7D1Q3KQU3 841 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 SV2AQ7L0J3 742 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 TRIM50Q86XT4 487 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 PHTF2Q8N3S3 785 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF784Q8NCA9 323 aaPredicted RBP6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 RNF217Q8TC41 542 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF594Q96JF6 807 aaPredicted RBP6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 TMPRSS4Q9NRS4 437 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 EGFL7Q9UHF1 273 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 ADAMTS8Q9UP79 889 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 CDK11AQ9UQ88 783 aaPredicted RBP6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 PCDHB9Q9Y5E1 797 aa6.06□□□□□ -1.44
SFSWAP-211ENST00000542813 CDC14CA4D256 554 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 H3BRB1 525 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 ABL1P00519 1130 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 ADH1AP07327 375 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 ATP1A2P50993 1020 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 CLDN10P78369 228 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 RNFT1Q5M7Z0 435 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 VWA5B2Q8N398 1253 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 SVOPQ8N4V2 548 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 C8orf37Q96NL8 207 aa6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 TUT1Q9H6E5 874 aaKnown RBP6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF395Q9H8N7 513 aaPredicted RBP6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 DNAAF2Q9NVR5 837 aaKnown RBP6.05□□□□□ -1.44
SFSWAP-211ENST00000542813 PRMT3O60678 531 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 SLURP2P0DP57 97 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 RAB15P59190 212 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 RASSF7Q02833 373 aa6.04□□□□□ -1.44
SFSWAP-211ENST00000542813 ZNF385CQ66K41 422 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms