RNA–Protein interactions for RNA: ENST00000541329.1

NPIPB4-213, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-213ENST00000541329 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 NOB1Q9ULX3 412 aaKnown RBP9.69□□□□□ -0.86
NPIPB4-213ENST00000541329 PLCH1Q4KWH8 1693 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 COL5A2P05997 1499 aaPredicted RBP9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 RLBP1P12271 317 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 EVA1CP58658 441 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 PDE3AQ14432 1141 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 ALDH1L2Q3SY69 923 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 DDRGK1Q96HY6 314 aa9.68□□□□□ -0.86
NPIPB4-213ENST00000541329 TAF7Q15545 349 aaPredicted RBP9.67□□□□□ -0.86
NPIPB4-213ENST00000541329 FTSJ3Q8IY81 847 aaKnown RBP9.67□□□□□ -0.86
NPIPB4-213ENST00000541329 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
NPIPB4-213ENST00000541329 WDR17Q8IZU2 1322 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 KIF16BQ96L93 1317 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 RNMTO43148 476 aaKnown RBP9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 TEFQ10587 303 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 DZIP1LQ8IYY4 767 aaKnown RBP9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 BACH2Q9BYV9 841 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 SPG7Q9UQ90 795 aa9.66□□□□□ -0.86
NPIPB4-213ENST00000541329 ADAMTS7Q9UKP4 1686 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 IPO8O15397 1037 aaKnown RBP9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 TRIM27P14373 513 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 PDE4AP27815 886 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 BTG4Q9NY30 223 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
NPIPB4-213ENST00000541329 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 BTBD11A6QL63 1104 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 ADAMTS2O95450 1211 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 RBM6P78332 1123 aaKnown RBP9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 ITPRIPQ8IWB1 547 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 ZNF428Q96B54 188 aa9.64□□□□□ -0.87
NPIPB4-213ENST00000541329 NRAPQ86VF7 1730 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 KCNQ3O43525 872 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 PHKG2P15735 406 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 MVPQ14764 893 aaKnown RBP9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 TMEM57Q8N5G2 664 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 C5P01031 1676 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 OVOS2A0A0G2JMS6 1433 aa9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 KDM6AO15550 1401 aaPredicted RBP9.63□□□□□ -0.87
NPIPB4-213ENST00000541329 AFF2P51816 1311 aa9.62□□□□□ -0.87
NPIPB4-213ENST00000541329 IFNL2Q8IZJ0 200 aa9.62□□□□□ -0.87
NPIPB4-213ENST00000541329 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
NPIPB4-213ENST00000541329 BABAM1Q9NWV8 329 aa9.62□□□□□ -0.87
NPIPB4-213ENST00000541329 EP400Q96L91 3159 aa9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 CACNA1FO60840 1977 aa9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 CYP27B1O15528 508 aa9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 SLC4A2P04920 1241 aa9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 IL2RBP14784 551 aa9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 ZCRB1Q8TBF4 217 aaKnown RBP9.61□□□□□ -0.87
NPIPB4-213ENST00000541329 TOGARAM1Q9Y4F4 1720 aa9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 EIF2S2P20042 333 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 EIF4A1P60842 406 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 CCDC30Q5VVM6 783 aa9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 G2E3Q7L622 706 aa9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 DDX54Q8TDD1 881 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 STK31Q9BXU1 1019 aa9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
NPIPB4-213ENST00000541329 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.6□□□□□ -0.872e-15■□□□□ 9.2
NPIPB4-213ENST00000541329 NWD2Q9ULI1 1742 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 PCDH11XQ9BZA7 1347 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 PCDH11YQ9BZA8 1340 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 IGHDP01880 384 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 HDGFL1Q5TGJ6 251 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 CENPQQ7L2Z9 268 aaPredicted RBP9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 SKAP1Q86WV1 359 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 IL27Q8NEV9 243 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 ARHGAP45Q92619 1136 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 DDX19BQ9UMR2 479 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 PCDHB15Q9Y5E8 787 aa9.59□□□□□ -0.87
NPIPB4-213ENST00000541329 ITGB4P16144 1822 aa9.59□□□□□ -0.88
NPIPB4-213ENST00000541329 ABCC4O15439 1325 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 KDM2BQ8NHM5 1336 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 CABP4P57796 275 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 GSE1Q14687 1217 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 MRC1P22897 1456 aa9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
NPIPB4-213ENST00000541329 PRAMEF22A3QJZ6 481 aa9.57□□□□□ -0.88
NPIPB4-213ENST00000541329 SLC4A10Q6U841 1118 aa9.57□□□□□ -0.88
NPIPB4-213ENST00000541329 CCDC9Q9Y3X0 531 aaKnown RBP9.57□□□□□ -0.88
NPIPB4-213ENST00000541329 PLEKHG2Q9H7P9 1386 aa9.57□□□□□ -0.88
NPIPB4-213ENST00000541329 LAMB4A4D0S4 1761 aa9.57□□□□□ -0.88
NPIPB4-213ENST00000541329 PTPRCP08575 1304 aa9.56□□□□□ -0.88
NPIPB4-213ENST00000541329 SOS1Q07889 1333 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms