RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ARHGEF10LQ9HCE6 1279 aa5.45□□□□□ -1.54
CBX3P4-201ENST00000538909 PIK3R2O00459 728 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 C2CD2LO14523 706 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 CLN3Q13286 438 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 FOXD4L6Q3SYB3 417 aaPredicted RBP5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 CC2D2BQ6DHV5 1058 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 FOXD4L3Q6VB84 417 aaPredicted RBP5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 SLCO4C1Q6ZQN7 724 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 TRIM52Q96A61 297 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 RUBCNLQ9H714 662 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 HMX1Q9NP08 348 aaPredicted RBP5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 RAB6BQ9NRW1 208 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 NOP53Q9NZM5 478 aaKnown RBP5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 PCDHB9Q9Y5E1 797 aa5.44□□□□□ -1.54
CBX3P4-201ENST00000538909 GATA4P43694 442 aa5.43□□□□□ -1.54
CBX3P4-201ENST00000538909 WDR44Q5JSH3 913 aa5.43□□□□□ -1.54
CBX3P4-201ENST00000538909 ABHD17AQ96GS6 310 aa5.43□□□□□ -1.54
CBX3P4-201ENST00000538909 NEURL1BA8MQ27 555 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 EPXP11678 715 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 FGFR3P22607 806 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 SCTRP47872 440 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 DGKGP49619 791 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 ERVK-9P63128 1117 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 CTBSQ01459 385 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 CYP2U1Q7Z449 544 aa5.42□□□□□ -1.54
CBX3P4-201ENST00000538909 CSB-PGBD3P0DP91 1061 aa5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 UBAP2LQ14157 1087 aaKnown RBP5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 RNF135Q8IUD6 432 aa5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 PGBD3Q8N328 593 aa5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 PROCA1Q8NCQ7 364 aaPredicted RBP5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 ATXN7L1Q9ULK2 861 aaPredicted RBP5.41□□□□□ -1.54
CBX3P4-201ENST00000538909 A0A1B0GTH6 734 aa5.4□□□□□ -1.54
CBX3P4-201ENST00000538909 USP17L8P0C7I0 530 aa5.4□□□□□ -1.54
CBX3P4-201ENST00000538909 RSPO4Q2I0M5 234 aaPredicted RBP5.4□□□□□ -1.54
CBX3P4-201ENST00000538909 ESF1Q9H501 851 aaKnown RBP5.4□□□□□ -1.54
CBX3P4-201ENST00000538909 ZFP64Q9NPA5 681 aa5.4□□□□□ -1.54
CBX3P4-201ENST00000538909 BNIP3LO60238 219 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 MSX1P28360 303 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 EFHC2Q5JST6 749 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 CHSY3Q70JA7 882 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 NBPF11Q86T75 865 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 VSIG10Q8N0Z9 540 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 OSBPL3Q9H4L5 887 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 PCDHB11Q9Y5F2 797 aa5.39□□□□□ -1.55
CBX3P4-201ENST00000538909 CENPCQ03188 943 aa5.38□□□□□ -1.55
CBX3P4-201ENST00000538909 GNASQ5JWF2 1037 aa5.38□□□□□ -1.55
CBX3P4-201ENST00000538909 ARTNQ5T4W7 220 aa5.38□□□□□ -1.55
CBX3P4-201ENST00000538909 CNKSR1Q969H4 720 aa5.38□□□□□ -1.55
CBX3P4-201ENST00000538909 ZSCAN10Q96SZ4 725 aaPredicted RBP5.38□□□□□ -1.55
CBX3P4-201ENST00000538909 IL2RAP01589 272 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 ARAFP10398 606 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 GTF2E1P29083 439 aaPredicted RBP5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 LBRQ14739 615 aaKnown RBP5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 SKIV2LQ15477 1246 aaKnown RBP5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 C4orf17Q53FE4 359 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 TMEM214Q6NUQ4 689 aaKnown RBP5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 TRIM11Q96F44 468 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 PLVAPQ9BX97 442 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 TPSG1Q9NRR2 321 aa5.37□□□□□ -1.55
CBX3P4-201ENST00000538909 ZBBXA8MT70 800 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 DYRK3O43781 588 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 TRAK2O60296 914 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 NKAPLQ5M9Q1 402 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 RNF20Q5VTR2 975 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 ESYT1Q9BSJ8 1104 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 KRTAP4-7Q9BYR0 210 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 NDFIP2Q9NV92 336 aa5.36□□□□□ -1.55
CBX3P4-201ENST00000538909 FBXO45P0C2W1 286 aa5.35□□□□□ -1.55
CBX3P4-201ENST00000538909 SPATA31C1P0DKV0 1188 aa5.35□□□□□ -1.55
CBX3P4-201ENST00000538909 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.35□□□□□ -1.55
CBX3P4-201ENST00000538909 GNRH1P01148 92 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 PRSS36Q5K4E3 855 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 FCHSD1Q86WN1 690 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 CCDC125Q86Z20 511 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 TRIM34Q9BYJ4 488 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 SLC24A3Q9HC58 644 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 KLF15Q9UIH9 416 aa5.34□□□□□ -1.55
CBX3P4-201ENST00000538909 DCDC2BA2VCK2 349 aa5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 CD33P20138 364 aa5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 ADH6P28332 368 aa5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 SH3D19Q5HYK7 790 aa5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 ZCCHC2Q9C0B9 1178 aaKnown RBP5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 FHDC1Q9C0D6 1143 aaPredicted RBP5.33□□□□□ -1.56
CBX3P4-201ENST00000538909 FAM229AH3BQW9 127 aa5.32□□□□□ -1.56
CBX3P4-201ENST00000538909 APBA3O96018 575 aa5.32□□□□□ -1.56
CBX3P4-201ENST00000538909 PLA2G4AP47712 749 aa5.32□□□□□ -1.56
CBX3P4-201ENST00000538909 PCBP4P57723 403 aaKnown RBP5.32□□□□□ -1.56
CBX3P4-201ENST00000538909 PCDHGC4Q9Y5F7 938 aa5.32□□□□□ -1.56
CBX3P4-201ENST00000538909 STAU1O95793 577 aaKnown RBP5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 PRRT3Q5FWE3 981 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 FIGNL1Q6PIW4 674 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 XAGE2Q96GT9 111 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 CRISPLD1Q9H336 500 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 GOLGA2P5Q9HBQ8 144 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 DNAAF2Q9NVR5 837 aaKnown RBP5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 HRH3Q9Y5N1 445 aa5.31□□□□□ -1.56
CBX3P4-201ENST00000538909 ATXN7O15265 892 aaPredicted RBP5.3□□□□□ -1.56
CBX3P4-201ENST00000538909 MYCP01106 439 aaPredicted RBP5.3□□□□□ -1.56
CBX3P4-201ENST00000538909 TBC1D9Q6ZT07 1266 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms