RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 EYA1Q99502 592 aa11.13□□□□□ -0.63
CHFR-211ENST00000535897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHFR-211ENST00000535897 RTCBQ9Y3I0 505 aaKnown RBP11.13□□□□□ -0.63
CHFR-211ENST00000535897 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 KIF3CO14782 793 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 TNNT2P45379 298 aaPredicted RBP11.12□□□□□ -0.63
CHFR-211ENST00000535897 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 RBM42Q9BTD8 480 aaKnown RBP11.12□□□□□ -0.63
CHFR-211ENST00000535897 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
CHFR-211ENST00000535897 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
CHFR-211ENST00000535897 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
CHFR-211ENST00000535897 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
CHFR-211ENST00000535897 FCHSD2O94868 740 aa11.1□□□□□ -0.63
CHFR-211ENST00000535897 RFC4P35249 363 aa11.1□□□□□ -0.63
CHFR-211ENST00000535897 APLP1P51693 650 aa11.1□□□□□ -0.63
CHFR-211ENST00000535897 TGFB2P61812 414 aa11.1□□□□□ -0.63
CHFR-211ENST00000535897 CCDC87Q9NVE4 849 aa11.1□□□□□ -0.63
CHFR-211ENST00000535897 C10orf71Q711Q0 1435 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 C4AP0C0L4 1744 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 KIAA1551Q9HCM1 1747 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 KDRP35968 1356 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 TOMM70O94826 608 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
CHFR-211ENST00000535897 C16orf71Q8IYS4 520 aaPredicted RBP11.09□□□□□ -0.63
CHFR-211ENST00000535897 POLKQ9UBT6 870 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 PARP3Q9Y6F1 533 aa11.09□□□□□ -0.63
CHFR-211ENST00000535897 COL5A3P25940 1745 aaPredicted RBP11.09□□□□□ -0.63
CHFR-211ENST00000535897 HSP90AB1P08238 724 aaKnown RBP11.08□□□□□ -0.64
CHFR-211ENST00000535897 DPEP1P16444 411 aa11.08□□□□□ -0.64
CHFR-211ENST00000535897 ADRA2BP18089 450 aa11.08□□□□□ -0.64
CHFR-211ENST00000535897 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
CHFR-211ENST00000535897 NMRK2Q9NPI5 230 aa11.08□□□□□ -0.64
CHFR-211ENST00000535897 ERVV-2B6SEH9 535 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 GYS1P13807 737 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 CABP4P57796 275 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
CHFR-211ENST00000535897 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
CHFR-211ENST00000535897 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 ZNF831Q5JPB2 1677 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 CNTNAP4Q9C0A0 1308 aa11.07□□□□□ -0.64
CHFR-211ENST00000535897 PTCD1O75127 700 aaKnown RBP11.06□□□□□ -0.64
CHFR-211ENST00000535897 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
CHFR-211ENST00000535897 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
CHFR-211ENST00000535897 RPS6KA4O75676 772 aa11.05□□□□□ -0.64
CHFR-211ENST00000535897 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
CHFR-211ENST00000535897 C9orf131Q5VYM1 1079 aa11.05□□□□□ -0.64
CHFR-211ENST00000535897 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
CHFR-211ENST00000535897 ARFGEF1Q9Y6D6 1849 aa11.05□□□□□ -0.64
CHFR-211ENST00000535897 PLEKHG2Q9H7P9 1386 aa11.04□□□□□ -0.64
CHFR-211ENST00000535897 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
CHFR-211ENST00000535897 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
CHFR-211ENST00000535897 MTHFSP49914 203 aa11.04□□□□□ -0.64
CHFR-211ENST00000535897 AMOTQ4VCS5 1084 aa11.04□□□□□ -0.64
CHFR-211ENST00000535897 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
CHFR-211ENST00000535897 KDM2BQ8NHM5 1336 aa11.04□□□□□ -0.64
CHFR-211ENST00000535897 MYH14Q7Z406 1995 aaKnown RBP11.03□□□□□ -0.64
CHFR-211ENST00000535897 CRKLP46109 303 aaKnown RBP11.03□□□□□ -0.64
CHFR-211ENST00000535897 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
CHFR-211ENST00000535897 RNF181Q9P0P0 153 aa11.03□□□□□ -0.64
CHFR-211ENST00000535897 SRP68Q9UHB9 627 aaKnown RBP11.03□□□□□ -0.64
CHFR-211ENST00000535897 KCNA3P22001 575 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 HTRA3P83110 453 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 FKBP8Q14318 412 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 AEBP1Q8IUX7 1158 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 DNAJC5GQ8N7S2 189 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 KCPQ6ZWJ8 1503 aa11.02□□□□□ -0.65
CHFR-211ENST00000535897 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
CHFR-211ENST00000535897 TJP1Q07157 1748 aa11.01□□□□□ -0.65
CHFR-211ENST00000535897 ZPR1O75312 459 aa11.01□□□□□ -0.65
CHFR-211ENST00000535897 CHRNA5P30532 468 aa11.01□□□□□ -0.65
CHFR-211ENST00000535897 DDR1Q08345 913 aa11.01□□□□□ -0.65
CHFR-211ENST00000535897 FSTL1Q12841 308 aa11□□□□□ -0.65
CHFR-211ENST00000535897 SULT6B1Q6IMI4 303 aa11□□□□□ -0.65
CHFR-211ENST00000535897 MORC1Q86VD1 984 aa11□□□□□ -0.65
CHFR-211ENST00000535897 RRAGCQ9HB90 399 aa11□□□□□ -0.65
CHFR-211ENST00000535897 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
CHFR-211ENST00000535897 KLRG1Q96E93 195 aa10.99□□□□□ -0.65
CHFR-211ENST00000535897 PANK3Q9H999 370 aa10.99□□□□□ -0.65
CHFR-211ENST00000535897 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
CHFR-211ENST00000535897 USPL1Q5W0Q7 1092 aa10.98□□□□□ -0.65
CHFR-211ENST00000535897 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
CHFR-211ENST00000535897 POLRMTO00411 1230 aaKnown RBP10.97□□□□□ -0.65
CHFR-211ENST00000535897 CAPN15O75808 1086 aa10.97□□□□□ -0.65
CHFR-211ENST00000535897 RASSF7Q02833 373 aa10.97□□□□□ -0.65
CHFR-211ENST00000535897 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
CHFR-211ENST00000535897 INTS5Q6P9B9 1019 aaKnown RBP10.97□□□□□ -0.65
CHFR-211ENST00000535897 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
CHFR-211ENST00000535897 SMC1BQ8NDV3 1235 aa10.97□□□□□ -0.65
CHFR-211ENST00000535897 SBF1O95248 1867 aa10.97□□□□□ -0.65
CHFR-211ENST00000535897 EIF4G2P78344 907 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHFR-211ENST00000535897 PCNTO95613 3336 aa10.96□□□□□ -0.66
CHFR-211ENST00000535897 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 COL15A1P39059 1388 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 SOS1Q07889 1333 aaPredicted RBP10.95□□□□□ -0.66
CHFR-211ENST00000535897 LMNB1P20700 586 aa10.95□□□□□ -0.66
CHFR-211ENST00000535897 TM4SF1P30408 202 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms