RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 EXOC8Q8IYI6 725 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 OTUD6BQ8N6M0 293 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNHG1-201ENST00000535076 TSPYL1Q9H0U9 437 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 SH3BP1Q9Y3L3 701 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 EMILIN1Q9Y6C2 1016 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 WFS1O76024 890 aa6.61□□□□□ -1.35
SNHG1-201ENST00000535076 DNTTIP2Q5QJE6 756 aaKnown RBP6.61□□□□□ -1.35
SNHG1-201ENST00000535076 L1TD1Q5T7N2 865 aaKnown RBP6.61□□□□□ -1.35
SNHG1-201ENST00000535076 Q6ZVU0 165 aa6.61□□□□□ -1.35
SNHG1-201ENST00000535076 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-201ENST00000535076 AGBL1Q96MI9 1066 aa6.61□□□□□ -1.35
SNHG1-201ENST00000535076 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
SNHG1-201ENST00000535076 ZBBXA8MT70 800 aa6.6□□□□□ -1.35
SNHG1-201ENST00000535076 ERVH48-1M5A8F1 160 aa6.6□□□□□ -1.35
SNHG1-201ENST00000535076 LILRA1O75019 489 aa6.6□□□□□ -1.35
SNHG1-201ENST00000535076 ADD1P35611 737 aaKnown RBP6.6□□□□□ -1.35
SNHG1-201ENST00000535076 TSHZ1Q6ZSZ6 1077 aa6.6□□□□□ -1.35
SNHG1-201ENST00000535076 ZNF784Q8NCA9 323 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-201ENST00000535076 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.6□□□□□ -1.351e-323■■■■□ 19.6
SNHG1-201ENST00000535076 RBM28Q9NW13 759 aaKnown RBP6.6□□□□□ -1.35
SNHG1-201ENST00000535076 DNMT3LQ9UJW3 386 aa6.6□□□□□ -1.35
SNHG1-201ENST00000535076 SOS2Q07890 1332 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 SOCS7O14512 581 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 GIGYF1O75420 1035 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 BMP2P12643 396 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 SSR1P43307 286 aaKnown RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 SCARF1Q14162 830 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 ZKSCAN8Q15776 578 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 NBPF10Q6P3W6 841 aaKnown RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 DZIP3Q86Y13 1208 aaKnown RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 TMTC2Q8N394 836 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 TERF2IPQ9NYB0 399 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 CDV3Q9UKY7 258 aaKnown RBP6.59□□□□□ -1.35
SNHG1-201ENST00000535076 TBC1D2BQ9UPU7 963 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 PCDHB9Q9Y5E1 797 aa6.59□□□□□ -1.35
SNHG1-201ENST00000535076 ERBB4Q15303 1308 aa6.58□□□□□ -1.36
SNHG1-201ENST00000535076 SATB1Q01826 763 aa6.58□□□□□ -1.36
SNHG1-201ENST00000535076 IRF5Q13568 498 aa6.58□□□□□ -1.36
SNHG1-201ENST00000535076 PNMA1Q8ND90 353 aa6.58□□□□□ -1.36
SNHG1-201ENST00000535076 ZNF526Q8TF50 670 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-201ENST00000535076 RRAGDQ9NQL2 400 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-201ENST00000535076 NDUFB9Q9Y6M9 179 aa6.58□□□□□ -1.36
SNHG1-201ENST00000535076 H3BM21 787 aa6.57□□□□□ -1.36
SNHG1-201ENST00000535076 CALRP27797 417 aaKnown RBP6.57□□□□□ -1.36
SNHG1-201ENST00000535076 MAP2K1Q02750 393 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-201ENST00000535076 NR1H3Q13133 447 aa6.57□□□□□ -1.36
SNHG1-201ENST00000535076 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
SNHG1-201ENST00000535076 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-201ENST00000535076 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
SNHG1-201ENST00000535076 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
SNHG1-201ENST00000535076 NXF1Q9UBU9 619 aaKnown RBP6.57□□□□□ -1.36
SNHG1-201ENST00000535076 SPINT1O43278 529 aa6.56□□□□□ -1.36
SNHG1-201ENST00000535076 RELBQ01201 579 aa6.56□□□□□ -1.36
SNHG1-201ENST00000535076 TSEN34Q9BSV6 310 aaKnown RBP6.56□□□□□ -1.36
SNHG1-201ENST00000535076 CYLDQ9NQC7 956 aa6.56□□□□□ -1.36
SNHG1-201ENST00000535076 PGPEP1Q9NXJ5 209 aa6.56□□□□□ -1.36
SNHG1-201ENST00000535076 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
SNHG1-201ENST00000535076 FEZ2Q9UHY8 353 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-201ENST00000535076 CFAP65Q6ZU64 1925 aaKnown RBP6.55□□□□□ -1.36
SNHG1-201ENST00000535076 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-201ENST00000535076 CTSOP43234 321 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-201ENST00000535076 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
SNHG1-201ENST00000535076 CCDC96Q2M329 555 aa6.55□□□□□ -1.36
SNHG1-201ENST00000535076 ZNF395Q9H8N7 513 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-201ENST00000535076 FIGNL2A6NMB9 653 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 MAN1A2O60476 641 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 ADH1AP07327 375 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 SCTRP47872 440 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 HDAC1Q13547 482 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-201ENST00000535076 MCM6Q14566 821 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 RINLQ6ZS11 566 aa6.54□□□□□ -1.36
SNHG1-201ENST00000535076 INSM2Q96T92 566 aaPredicted RBP6.54□□□□□ -1.36
SNHG1-201ENST00000535076 TTLL8A6PVC2 850 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 VGLL3A8MV65 326 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 GOLIM4O00461 696 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 WIPF1O43516 503 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-201ENST00000535076 GMPRP36959 345 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 FRAT1Q92837 279 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-201ENST00000535076 TSPAN18Q96SJ8 248 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 GDPD2Q9HCC8 539 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 NUB1Q9Y5A7 615 aa6.53□□□□□ -1.36
SNHG1-201ENST00000535076 EEA1Q15075 1411 aa6.52□□□□□ -1.37
SNHG1-201ENST00000535076 UPP2O95045 317 aa6.52□□□□□ -1.37
SNHG1-201ENST00000535076 SEMA3FQ13275 785 aa6.52□□□□□ -1.37
SNHG1-201ENST00000535076 MTA1Q13330 715 aa6.52□□□□□ -1.37
SNHG1-201ENST00000535076 FOXD4L5Q5VV16 416 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-201ENST00000535076 SDR16C5Q8N3Y7 309 aa6.52□□□□□ -1.37
SNHG1-201ENST00000535076 ZHX1Q9UKY1 873 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-201ENST00000535076 PPFIA3O75145 1194 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 LMOD3Q0VAK6 560 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 MYBPC2Q14324 1141 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 TSGA10IPQ3SY00 556 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-201ENST00000535076 CTR9Q6PD62 1173 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 ANKRD23Q86SG2 305 aa6.51□□□□□ -1.37
SNHG1-201ENST00000535076 SEPT12Q8IYM1 358 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms