RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 EIF4A1P60842 406 aaKnown RBP13.91□□□□□ -0.18
SRPRA-205ENST00000531104 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
SRPRA-205ENST00000531104 TCERG1O14776 1098 aaKnown RBP13.9□□□□□ -0.18
SRPRA-205ENST00000531104 ZBTB7BO15156 539 aaPredicted RBP13.89□□□□□ -0.19
SRPRA-205ENST00000531104 INTS3Q68E01 1043 aaKnown RBP13.89□□□□□ -0.19
SRPRA-205ENST00000531104 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
SRPRA-205ENST00000531104 PHLPP1O60346 1717 aa13.89□□□□□ -0.19
SRPRA-205ENST00000531104 TEFQ10587 303 aa13.88□□□□□ -0.19
SRPRA-205ENST00000531104 HDAC1Q13547 482 aaPredicted RBP13.88□□□□□ -0.19
SRPRA-205ENST00000531104 CCDC30Q5VVM6 783 aa13.88□□□□□ -0.19
SRPRA-205ENST00000531104 IFNL2Q8IZJ0 200 aa13.88□□□□□ -0.19
SRPRA-205ENST00000531104 CHMP4BQ9H444 224 aaKnown RBP13.88□□□□□ -0.19
SRPRA-205ENST00000531104 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
SRPRA-205ENST00000531104 SHANK3Q9BYB0 1731 aa13.87□□□□□ -0.19
SRPRA-205ENST00000531104 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
SRPRA-205ENST00000531104 CYP27B1O15528 508 aa13.87□□□□□ -0.19
SRPRA-205ENST00000531104 KCNQ3O43525 872 aa13.87□□□□□ -0.19
SRPRA-205ENST00000531104 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
SRPRA-205ENST00000531104 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
SRPRA-205ENST00000531104 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
SRPRA-205ENST00000531104 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
SRPRA-205ENST00000531104 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
SRPRA-205ENST00000531104 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
SRPRA-205ENST00000531104 TOM1O60784 492 aa13.85□□□□□ -0.19
SRPRA-205ENST00000531104 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
SRPRA-205ENST00000531104 G2E3Q7L622 706 aa13.85□□□□□ -0.19
SRPRA-205ENST00000531104 DCAF5Q96JK2 942 aa13.85□□□□□ -0.19
SRPRA-205ENST00000531104 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
SRPRA-205ENST00000531104 N4BP2Q86UW6 1770 aaPredicted RBP13.85□□□□□ -0.19
SRPRA-205ENST00000531104 DISP2A7MBM2 1401 aa13.84□□□□□ -0.19
SRPRA-205ENST00000531104 IL2RBP14784 551 aa13.84□□□□□ -0.19
SRPRA-205ENST00000531104 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
SRPRA-205ENST00000531104 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
SRPRA-205ENST00000531104 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
SRPRA-205ENST00000531104 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
SRPRA-205ENST00000531104 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.2
SRPRA-205ENST00000531104 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
SRPRA-205ENST00000531104 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
SRPRA-205ENST00000531104 NRAPQ86VF7 1730 aa13.82□□□□□ -0.2
SRPRA-205ENST00000531104 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
SRPRA-205ENST00000531104 EVA1CP58658 441 aa13.82□□□□□ -0.2
SRPRA-205ENST00000531104 FLIIQ13045 1269 aa13.82□□□□□ -0.2
SRPRA-205ENST00000531104 HDGFL1Q5TGJ6 251 aa13.82□□□□□ -0.2
SRPRA-205ENST00000531104 RBM19Q9Y4C8 960 aaKnown RBP13.82□□□□□ -0.2
SRPRA-205ENST00000531104 GLI3P10071 1580 aa13.81□□□□□ -0.2
SRPRA-205ENST00000531104 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
SRPRA-205ENST00000531104 SMC5Q8IY18 1101 aa13.81□□□□□ -0.2
SRPRA-205ENST00000531104 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
SRPRA-205ENST00000531104 PAPPAQ13219 1627 aa13.8□□□□□ -0.2
SRPRA-205ENST00000531104 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
SRPRA-205ENST00000531104 ZNF790Q6PG37 636 aa13.8□□□□□ -0.2
SRPRA-205ENST00000531104 STRN4Q9NRL3 753 aa13.8□□□□□ -0.2
SRPRA-205ENST00000531104 WNK3Q9BYP7 1800 aa13.8□□□□□ -0.2
SRPRA-205ENST00000531104 C5P01031 1676 aa13.79□□□□□ -0.2
SRPRA-205ENST00000531104 ERVV-2B6SEH9 535 aa13.79□□□□□ -0.2
SRPRA-205ENST00000531104 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
SRPRA-205ENST00000531104 SIRT2Q8IXJ6 389 aa13.78□□□□□ -0.2
SRPRA-205ENST00000531104 PDZRN3Q9UPQ7 1066 aa13.78□□□□□ -0.2
SRPRA-205ENST00000531104 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
SRPRA-205ENST00000531104 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
SRPRA-205ENST00000531104 UBR2Q8IWV8 1755 aa13.78□□□□□ -0.2
SRPRA-205ENST00000531104 F6X3S4 739 aa13.77□□□□□ -0.21
SRPRA-205ENST00000531104 NECTIN2Q92692 538 aa13.77□□□□□ -0.21
SRPRA-205ENST00000531104 PHAXQ9H814 394 aaKnown RBP13.77□□□□□ -0.21
SRPRA-205ENST00000531104 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
SRPRA-205ENST00000531104 DBF4Q9UBU7 674 aaPredicted RBP13.77□□□□□ -0.21
SRPRA-205ENST00000531104 TOGARAM1Q9Y4F4 1720 aa13.77□□□□□ -0.21
SRPRA-205ENST00000531104 LRP6O75581 1613 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 SLIT2O94813 1529 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 TNS2Q63HR2 1409 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 EIF2S2P20042 333 aaKnown RBP13.76□□□□□ -0.21
SRPRA-205ENST00000531104 CABP4P57796 275 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 SLC39A6Q13433 755 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 FKBP5Q13451 457 aaPredicted RBP13.76□□□□□ -0.21
SRPRA-205ENST00000531104 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 BACH2Q9BYV9 841 aa13.76□□□□□ -0.21
SRPRA-205ENST00000531104 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 PDE4AP27815 886 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 PDIA6Q15084 440 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-205ENST00000531104 ANKRD44Q8N8A2 993 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
SRPRA-205ENST00000531104 MEIS3Q99687 375 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
SRPRA-205ENST00000531104 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
SRPRA-205ENST00000531104 ADCY9O60503 1353 aa13.74□□□□□ -0.21
SRPRA-205ENST00000531104 IBTKQ9P2D0 1353 aaPredicted RBP13.74□□□□□ -0.21
SRPRA-205ENST00000531104 GCC1Q96CN9 775 aa13.74□□□□□ -0.21
SRPRA-205ENST00000531104 C1orf115Q9H7X2 142 aa13.74□□□□□ -0.21
SRPRA-205ENST00000531104 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
SRPRA-205ENST00000531104 THRAP3Q9Y2W1 955 aaKnown RBP13.74□□□□□ -0.21
SRPRA-205ENST00000531104 SNRPA1P09661 255 aaKnown RBP13.73□□□□□ -0.21
SRPRA-205ENST00000531104 NUCB1Q02818 461 aa13.73□□□□□ -0.21
SRPRA-205ENST00000531104 PROSER3Q2NL68 480 aa13.73□□□□□ -0.21
SRPRA-205ENST00000531104 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms