RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ADRA2BP18089 450 aa14.54□□□□□ -0.08
COPB1-207ENST00000529866 ITPK1Q13572 414 aa14.54□□□□□ -0.08
COPB1-207ENST00000529866 TRAPPC3LQ5T215 181 aa14.54□□□□□ -0.08
COPB1-207ENST00000529866 ASAP1Q9ULH1 1129 aa14.54□□□□□ -0.08
COPB1-207ENST00000529866 UBR3Q6ZT12 1888 aa14.54□□□□□ -0.08
COPB1-207ENST00000529866 NCAPD2Q15021 1401 aa14.53□□□□□ -0.08
COPB1-207ENST00000529866 A0A0G2JLW4 131 aa14.53□□□□□ -0.08
COPB1-207ENST00000529866 FSTL1Q12841 308 aa14.53□□□□□ -0.08
COPB1-207ENST00000529866 CDCA8Q53HL2 280 aa14.53□□□□□ -0.08
COPB1-207ENST00000529866 IFNL2Q8IZJ0 200 aa14.53□□□□□ -0.08
COPB1-207ENST00000529866 PPM1GO15355 546 aaPredicted RBP14.52□□□□□ -0.09
COPB1-207ENST00000529866 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
COPB1-207ENST00000529866 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.09
COPB1-207ENST00000529866 PARP3Q9Y6F1 533 aa14.52□□□□□ -0.09
COPB1-207ENST00000529866 KDM2BQ8NHM5 1336 aa14.51□□□□□ -0.09
COPB1-207ENST00000529866 DPEP1P16444 411 aa14.51□□□□□ -0.09
COPB1-207ENST00000529866 C9orf131Q5VYM1 1079 aa14.51□□□□□ -0.09
COPB1-207ENST00000529866 ATG3Q9NT62 314 aa14.51□□□□□ -0.09
COPB1-207ENST00000529866 PKD1L3Q7Z443 1732 aa14.51□□□□□ -0.09
COPB1-207ENST00000529866 PHKG2P15735 406 aa14.5□□□□□ -0.09
COPB1-207ENST00000529866 RFC4P35249 363 aa14.5□□□□□ -0.09
COPB1-207ENST00000529866 JMYQ8N9B5 988 aa14.5□□□□□ -0.09
COPB1-207ENST00000529866 KDRP35968 1356 aa14.49□□□□□ -0.09
COPB1-207ENST00000529866 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
COPB1-207ENST00000529866 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
COPB1-207ENST00000529866 GYS1P13807 737 aa14.48□□□□□ -0.09
COPB1-207ENST00000529866 RC3H1Q5TC82 1133 aaKnown RBP14.48□□□□□ -0.09
COPB1-207ENST00000529866 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
COPB1-207ENST00000529866 EYA1Q99502 592 aa14.48□□□□□ -0.09
COPB1-207ENST00000529866 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
COPB1-207ENST00000529866 PIM2Q9P1W9 311 aa14.48□□□□□ -0.09
COPB1-207ENST00000529866 MAP2P11137 1827 aaKnown RBP14.48□□□□□ -0.09
COPB1-207ENST00000529866 HSP90AB1P08238 724 aaKnown RBP14.47□□□□□ -0.09
COPB1-207ENST00000529866 DALRD3Q5D0E6 543 aaKnown RBP14.47□□□□□ -0.09
COPB1-207ENST00000529866 COL13A1Q5TAT6 717 aaPredicted RBP14.47□□□□□ -0.09
COPB1-207ENST00000529866 ITGB4P16144 1822 aa14.47□□□□□ -0.09
COPB1-207ENST00000529866 ERVV-2B6SEH9 535 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 RPS6KA4O75676 772 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 CAPN15O75808 1086 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 HTRA3P83110 453 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 TNS4Q8IZW8 715 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 SMC1BQ8NDV3 1235 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 DCAF5Q96JK2 942 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 RNF181Q9P0P0 153 aa14.46□□□□□ -0.09
COPB1-207ENST00000529866 KIF13BQ9NQT8 1826 aa14.45□□□□□ -0.1
COPB1-207ENST00000529866 KCPQ6ZWJ8 1503 aa14.45□□□□□ -0.1
COPB1-207ENST00000529866 WDR90Q96KV7 1748 aa14.44□□□□□ -0.1
COPB1-207ENST00000529866 C4AP0C0L4 1744 aa14.44□□□□□ -0.1
COPB1-207ENST00000529866 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
COPB1-207ENST00000529866 KCNA3P22001 575 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 PRELPP51888 382 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 SLC4A9Q96Q91 983 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 KIAA1551Q9HCM1 1747 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 KIF20BQ96Q89 1820 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 PCNTO95613 3336 aa14.43□□□□□ -0.1
COPB1-207ENST00000529866 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
COPB1-207ENST00000529866 RRAGCQ9HB90 399 aa14.42□□□□□ -0.1
COPB1-207ENST00000529866 N4BP2Q86UW6 1770 aaPredicted RBP14.42□□□□□ -0.1
COPB1-207ENST00000529866 CABP4P57796 275 aa14.41□□□□□ -0.1
COPB1-207ENST00000529866 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
COPB1-207ENST00000529866 EIF4A2Q14240 407 aaKnown RBP14.4□□□□□ -0.1
COPB1-207ENST00000529866 PLEKHO1Q53GL0 409 aaPredicted RBP14.4□□□□□ -0.1
COPB1-207ENST00000529866 POLKQ9UBT6 870 aa14.4□□□□□ -0.1
COPB1-207ENST00000529866 CRKLP46109 303 aaKnown RBP14.39□□□□□ -0.11
COPB1-207ENST00000529866 DDR1Q08345 913 aa14.39□□□□□ -0.11
COPB1-207ENST00000529866 FKBP8Q14318 412 aa14.39□□□□□ -0.11
COPB1-207ENST00000529866 AMOTQ4VCS5 1084 aa14.39□□□□□ -0.11
COPB1-207ENST00000529866 ZNF530Q6P9A1 599 aaPredicted RBP14.39□□□□□ -0.11
COPB1-207ENST00000529866 ZNF831Q5JPB2 1677 aa14.39□□□□□ -0.11
COPB1-207ENST00000529866 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
COPB1-207ENST00000529866 CHRNA5P30532 468 aa14.38□□□□□ -0.11
COPB1-207ENST00000529866 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
COPB1-207ENST00000529866 C1orf141Q5JVX7 400 aa14.38□□□□□ -0.11
COPB1-207ENST00000529866 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
COPB1-207ENST00000529866 ANKRD26Q9UPS8 1709 aa14.38□□□□□ -0.11
COPB1-207ENST00000529866 ZPR1O75312 459 aa14.37□□□□□ -0.11
COPB1-207ENST00000529866 HSPA1AP0DMV8 641 aaKnown RBP14.37□□□□□ -0.11
COPB1-207ENST00000529866 HSPA1BP0DMV9 641 aaKnown RBP14.37□□□□□ -0.11
COPB1-207ENST00000529866 VEGFAP15692 232 aaPredicted RBP14.37□□□□□ -0.11
COPB1-207ENST00000529866 MTHFSP49914 203 aa14.37□□□□□ -0.11
COPB1-207ENST00000529866 KDM6AO15550 1401 aaPredicted RBP14.37□□□□□ -0.11
COPB1-207ENST00000529866 GLTPD2A6NH11 291 aa14.36□□□□□ -0.11
COPB1-207ENST00000529866 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
COPB1-207ENST00000529866 LMNB1P20700 586 aa14.36□□□□□ -0.11
COPB1-207ENST00000529866 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
COPB1-207ENST00000529866 TNRC6CQ9HCJ0 1690 aaKnown RBP14.36□□□□□ -0.11
COPB1-207ENST00000529866 TNNT2P45379 298 aaPredicted RBP14.35□□□□□ -0.11
COPB1-207ENST00000529866 RASSF7Q02833 373 aa14.35□□□□□ -0.11
COPB1-207ENST00000529866 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
COPB1-207ENST00000529866 COL5A3P25940 1745 aaPredicted RBP14.34□□□□□ -0.11
COPB1-207ENST00000529866 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
COPB1-207ENST00000529866 TM4SF1P30408 202 aa14.32□□□□□ -0.12
COPB1-207ENST00000529866 TTLL6Q8N841 843 aa14.32□□□□□ -0.12
COPB1-207ENST00000529866 NFATC2IPQ8NCF5 419 aa14.32□□□□□ -0.12
COPB1-207ENST00000529866 INTS5Q6P9B9 1019 aaKnown RBP14.31□□□□□ -0.12
COPB1-207ENST00000529866 SOS1Q07889 1333 aaPredicted RBP14.31□□□□□ -0.12
COPB1-207ENST00000529866 NFIXQ14938 502 aa14.3□□□□□ -0.12
COPB1-207ENST00000529866 DPY19L2Q6NUT2 758 aa14.3□□□□□ -0.12
COPB1-207ENST00000529866 DNAJC10Q8IXB1 793 aa14.29□□□□□ -0.12
COPB1-207ENST00000529866 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms