RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 ARXQ96QS3 562 aa8.85□□□□□ -0.99
LTBP3-215ENST00000529764 C5P01031 1676 aa8.85□□□□□ -0.99
LTBP3-215ENST00000529764 RBM42Q9BTD8 480 aaKnown RBP8.84□□□□□ -0.99
LTBP3-215ENST00000529764 KDRP35968 1356 aa8.84□□□□□ -0.99
LTBP3-215ENST00000529764 HMOX1P09601 288 aa8.83□□□□□ -1
LTBP3-215ENST00000529764 SSFA2P28290 1259 aa8.83□□□□□ -1
LTBP3-215ENST00000529764 KCNQ4P56696 695 aa8.83□□□□□ -1
LTBP3-215ENST00000529764 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
LTBP3-215ENST00000529764 PNNQ9H307 717 aaKnown RBP8.83□□□□□ -1
LTBP3-215ENST00000529764 TOGARAM1Q9Y4F4 1720 aa8.83□□□□□ -1
LTBP3-215ENST00000529764 PNPLA7Q6ZV29 1317 aa8.82□□□□□ -1
LTBP3-215ENST00000529764 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
LTBP3-215ENST00000529764 DSG3P32926 999 aa8.82□□□□□ -1
LTBP3-215ENST00000529764 ZEB1P37275 1124 aaPredicted RBP8.82□□□□□ -1
LTBP3-215ENST00000529764 NPM2Q86SE8 214 aaKnown RBP8.82□□□□□ -1
LTBP3-215ENST00000529764 AEBP1Q8IUX7 1158 aa8.82□□□□□ -1
LTBP3-215ENST00000529764 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
LTBP3-215ENST00000529764 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
LTBP3-215ENST00000529764 C4BP0C0L5 1744 aa8.82□□□□□ -1
LTBP3-215ENST00000529764 GNPATO15228 680 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 CAPN15O75808 1086 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 PHF14O94880 888 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 PTGER2P43116 358 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 TEFQ10587 303 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 TTC5Q8N0Z6 440 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 SYT17Q9BSW7 474 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 PDGFDQ9GZP0 370 aaPredicted RBP8.81□□□□□ -1
LTBP3-215ENST00000529764 ATG3Q9NT62 314 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 ASAP1Q9ULH1 1129 aa8.81□□□□□ -1
LTBP3-215ENST00000529764 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.8□□□□□ -1
LTBP3-215ENST00000529764 GNAT3A8MTJ3 354 aa8.8□□□□□ -1
LTBP3-215ENST00000529764 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
LTBP3-215ENST00000529764 RFC4P35249 363 aa8.8□□□□□ -1
LTBP3-215ENST00000529764 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -1
LTBP3-215ENST00000529764 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
LTBP3-215ENST00000529764 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
LTBP3-215ENST00000529764 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
LTBP3-215ENST00000529764 RTF1Q92541 710 aaKnown RBP8.8□□□□□ -1
LTBP3-215ENST00000529764 SCN11AQ9UI33 1791 aa8.8□□□□□ -1
LTBP3-215ENST00000529764 ZNF831Q5JPB2 1677 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 MAP3K5Q99683 1374 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 RNMTO43148 476 aaKnown RBP8.79□□□□□ -1
LTBP3-215ENST00000529764 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
LTBP3-215ENST00000529764 YY1P25490 414 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 GPR162Q16538 588 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 SLC52A2Q9HAB3 445 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 TUBGCP6Q96RT7 1819 aa8.79□□□□□ -1
LTBP3-215ENST00000529764 FCHSD2O94868 740 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 PPP2R1AP30153 589 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 RALBP1Q15311 655 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 MTHFSDQ2M296 383 aaKnown RBP8.78□□□□□ -1
LTBP3-215ENST00000529764 PELP1Q8IZL8 1130 aaKnown RBP8.78□□□□□ -1
LTBP3-215ENST00000529764 NLGN1Q8N2Q7 840 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 LINC00116Q8NCU8 138 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 SGIP1Q9BQI5 828 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 TEX13AQ9BXU3 409 aaPredicted RBP8.78□□□□□ -1
LTBP3-215ENST00000529764 SPINK5Q9NQ38 1064 aaPredicted RBP8.78□□□□□ -1
LTBP3-215ENST00000529764 KDM6AO15550 1401 aaPredicted RBP8.78□□□□□ -1
LTBP3-215ENST00000529764 CNTNAP4Q9C0A0 1308 aa8.78□□□□□ -1
LTBP3-215ENST00000529764 SRCAPQ6ZRS2 3230 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 UBR3Q6ZT12 1888 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 GRIN3BO60391 1043 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 STARD3NLO95772 234 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 MSL1Q68DK7 614 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 CD2APQ9Y5K6 639 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 VIRMAQ69YN4 1812 aaKnown RBP8.77□□□□□ -1.01
LTBP3-215ENST00000529764 MAPK8IP3Q9UPT6 1336 aa8.77□□□□□ -1.01
LTBP3-215ENST00000529764 ZPR1O75312 459 aa8.76□□□□□ -1.01
LTBP3-215ENST00000529764 RPS6KA4O75676 772 aa8.76□□□□□ -1.01
LTBP3-215ENST00000529764 ITPK1Q13572 414 aa8.76□□□□□ -1.01
LTBP3-215ENST00000529764 VSIG10Q8N0Z9 540 aa8.76□□□□□ -1.01
LTBP3-215ENST00000529764 PARP3Q9Y6F1 533 aa8.76□□□□□ -1.01
LTBP3-215ENST00000529764 COL24A1Q17RW2 1714 aa8.75□□□□□ -1.01
LTBP3-215ENST00000529764 HTATSF1O43719 755 aaKnown RBP8.75□□□□□ -1.01
LTBP3-215ENST00000529764 CRKLP46109 303 aaKnown RBP8.75□□□□□ -1.01
LTBP3-215ENST00000529764 POTEHQ6S545 545 aa8.75□□□□□ -1.01
LTBP3-215ENST00000529764 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
LTBP3-215ENST00000529764 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
LTBP3-215ENST00000529764 COL3A1P02461 1466 aaPredicted RBP8.75□□□□□ -1.01
LTBP3-215ENST00000529764 A0A087WZG4 1122 aa8.74□□□□□ -1.01
LTBP3-215ENST00000529764 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
LTBP3-215ENST00000529764 FMNL2Q96PY5 1086 aa8.74□□□□□ -1.01
LTBP3-215ENST00000529764 RSPH6AQ9H0K4 717 aa8.74□□□□□ -1.01
LTBP3-215ENST00000529764 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
LTBP3-215ENST00000529764 CHD4Q14839 1912 aa8.74□□□□□ -1.01
LTBP3-215ENST00000529764 MRC1P22897 1456 aa8.73□□□□□ -1.01
LTBP3-215ENST00000529764 DDX10Q13206 875 aaKnown RBP8.73□□□□□ -1.01
LTBP3-215ENST00000529764 PNISRQ8TF01 805 aaKnown RBP8.73□□□□□ -1.01
LTBP3-215ENST00000529764 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
LTBP3-215ENST00000529764 NPHP1O15259 732 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 MMP10P09238 476 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 LMOD3Q0VAK6 560 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 SLC39A6Q13433 755 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 WDR43Q15061 677 aaKnown RBP eCLIP8.72□□□□□ -1.01
LTBP3-215ENST00000529764 ZNF790Q6PG37 636 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 DNAJC10Q8IXB1 793 aa8.72□□□□□ -1.01
LTBP3-215ENST00000529764 CICQ96RK0 1608 aaPredicted RBP8.72□□□□□ -1.01
LTBP3-215ENST00000529764 TGFB2P61812 414 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms