RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 KLRG1Q96E93 195 aa25.01■■□□□ 1.59
LTBP3-211ENST00000528966 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
LTBP3-211ENST00000528966 NCAPD2Q15021 1401 aa25.01■■□□□ 1.59
LTBP3-211ENST00000528966 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
LTBP3-211ENST00000528966 JMYQ8N9B5 988 aa25■■□□□ 1.59
LTBP3-211ENST00000528966 KIF24Q5T7B8 1368 aa25■■□□□ 1.59
LTBP3-211ENST00000528966 ATP6V1AP38606 617 aa24.98■■□□□ 1.59
LTBP3-211ENST00000528966 ARFGEF1Q9Y6D6 1849 aa24.98■■□□□ 1.59
LTBP3-211ENST00000528966 DPEP1P16444 411 aa24.97■■□□□ 1.59
LTBP3-211ENST00000528966 TMOD3Q9NYL9 352 aa24.97■■□□□ 1.59
LTBP3-211ENST00000528966 C4AP0C0L4 1744 aa24.97■■□□□ 1.59
LTBP3-211ENST00000528966 CAPN15O75808 1086 aa24.95■■□□□ 1.58
LTBP3-211ENST00000528966 FCHSD2O94868 740 aa24.95■■□□□ 1.58
LTBP3-211ENST00000528966 C9orf131Q5VYM1 1079 aa24.94■■□□□ 1.58
LTBP3-211ENST00000528966 NLGN1Q8N2Q7 840 aa24.94■■□□□ 1.58
LTBP3-211ENST00000528966 SPG7Q9UQ90 795 aa24.94■■□□□ 1.58
LTBP3-211ENST00000528966 EMILIN1Q9Y6C2 1016 aa24.94■■□□□ 1.58
LTBP3-211ENST00000528966 KDRP35968 1356 aa24.93■■□□□ 1.58
LTBP3-211ENST00000528966 PLEKHG2Q9H7P9 1386 aa24.93■■□□□ 1.58
LTBP3-211ENST00000528966 TMF1P82094 1093 aa24.93■■□□□ 1.58
LTBP3-211ENST00000528966 FSTL1Q12841 308 aa24.93■■□□□ 1.58
LTBP3-211ENST00000528966 ATG3Q9NT62 314 aa24.93■■□□□ 1.58
LTBP3-211ENST00000528966 KCPQ6ZWJ8 1503 aa24.92■■□□□ 1.58
LTBP3-211ENST00000528966 KCNA3P22001 575 aa24.92■■□□□ 1.58
LTBP3-211ENST00000528966 C16orf71Q8IYS4 520 aaPredicted RBP24.92■■□□□ 1.58
LTBP3-211ENST00000528966 ANKRD26Q9UPS8 1709 aa24.92■■□□□ 1.58
LTBP3-211ENST00000528966 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
LTBP3-211ENST00000528966 CCDC87Q9NVE4 849 aa24.91■■□□□ 1.58
LTBP3-211ENST00000528966 RTCBQ9Y3I0 505 aaKnown RBP24.91■■□□□ 1.58
LTBP3-211ENST00000528966 COL5A3P25940 1745 aaPredicted RBP24.91■■□□□ 1.58
LTBP3-211ENST00000528966 ZNF831Q5JPB2 1677 aa24.91■■□□□ 1.58
LTBP3-211ENST00000528966 SLC4A9Q96Q91 983 aa24.9■■□□□ 1.58
LTBP3-211ENST00000528966 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
LTBP3-211ENST00000528966 SLC24A1O60721 1099 aa24.89■■□□□ 1.58
LTBP3-211ENST00000528966 GYS1P13807 737 aa24.89■■□□□ 1.58
LTBP3-211ENST00000528966 PHKG2P15735 406 aa24.89■■□□□ 1.58
LTBP3-211ENST00000528966 TNS4Q8IZW8 715 aa24.89■■□□□ 1.58
LTBP3-211ENST00000528966 ARHGEF1Q92888 912 aaKnown RBP24.89■■□□□ 1.58
LTBP3-211ENST00000528966 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.58
LTBP3-211ENST00000528966 TNRC6CQ9HCJ0 1690 aaKnown RBP24.88■■□□□ 1.57
LTBP3-211ENST00000528966 SBF1O95248 1867 aa24.88■■□□□ 1.57
LTBP3-211ENST00000528966 MYH14Q7Z406 1995 aaKnown RBP24.88■■□□□ 1.57
LTBP3-211ENST00000528966 KDM2BQ8NHM5 1336 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 ADRA2BP18089 450 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 PRELPP51888 382 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 IFNL2Q8IZJ0 200 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 EYA1Q99502 592 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 PARP3Q9Y6F1 533 aa24.86■■□□□ 1.57
LTBP3-211ENST00000528966 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
LTBP3-211ENST00000528966 PPM1GO15355 546 aaPredicted RBP24.84■■□□□ 1.57
LTBP3-211ENST00000528966 RC3H1Q5TC82 1133 aaKnown RBP24.84■■□□□ 1.57
LTBP3-211ENST00000528966 RRAGCQ9HB90 399 aa24.84■■□□□ 1.57
LTBP3-211ENST00000528966 RNF181Q9P0P0 153 aa24.84■■□□□ 1.57
LTBP3-211ENST00000528966 PIM2Q9P1W9 311 aa24.84■■□□□ 1.57
LTBP3-211ENST00000528966 CNTNAP4Q9C0A0 1308 aa24.84■■□□□ 1.57
LTBP3-211ENST00000528966 RFC4P35249 363 aa24.83■■□□□ 1.57
LTBP3-211ENST00000528966 RPS6KA4O75676 772 aa24.82■■□□□ 1.56
LTBP3-211ENST00000528966 RBM42Q9BTD8 480 aaKnown RBP24.82■■□□□ 1.56
LTBP3-211ENST00000528966 CARD14Q9BXL6 1004 aa24.82■■□□□ 1.56
LTBP3-211ENST00000528966 WASHC2AQ641Q2 1341 aa24.82■■□□□ 1.56
LTBP3-211ENST00000528966 DALRD3Q5D0E6 543 aaKnown RBP24.8■■□□□ 1.56
LTBP3-211ENST00000528966 SMC1BQ8NDV3 1235 aa24.79■■□□□ 1.56
LTBP3-211ENST00000528966 DDR1Q08345 913 aa24.77■■□□□ 1.56
LTBP3-211ENST00000528966 ERVV-2B6SEH9 535 aa24.76■■□□□ 1.55
LTBP3-211ENST00000528966 CHRNA5P30532 468 aa24.76■■□□□ 1.55
LTBP3-211ENST00000528966 SRP68Q9UHB9 627 aaKnown RBP24.76■■□□□ 1.55
LTBP3-211ENST00000528966 FKBP8Q14318 412 aa24.75■■□□□ 1.55
LTBP3-211ENST00000528966 HSPA1AP0DMV8 641 aaKnown RBP24.74■■□□□ 1.55
LTBP3-211ENST00000528966 HSPA1BP0DMV9 641 aaKnown RBP24.74■■□□□ 1.55
LTBP3-211ENST00000528966 KDM6AO15550 1401 aaPredicted RBP24.73■■□□□ 1.55
LTBP3-211ENST00000528966 USP42Q9H9J4 1324 aaKnown RBP24.73■■□□□ 1.55
LTBP3-211ENST00000528966 ADAMTS7Q9UKP4 1686 aa24.72■■□□□ 1.55
LTBP3-211ENST00000528966 POLKQ9UBT6 870 aa24.72■■□□□ 1.55
LTBP3-211ENST00000528966 CRKLP46109 303 aaKnown RBP24.71■■□□□ 1.55
LTBP3-211ENST00000528966 RASSF7Q02833 373 aa24.71■■□□□ 1.55
LTBP3-211ENST00000528966 EIF4A2Q14240 407 aaKnown RBP24.71■■□□□ 1.55
LTBP3-211ENST00000528966 TJP1Q07157 1748 aa24.71■■□□□ 1.55
LTBP3-211ENST00000528966 ZC3H4Q9UPT8 1303 aaKnown RBP24.7■■□□□ 1.54
LTBP3-211ENST00000528966 CCDC88AQ3V6T2 1871 aa24.68■■□□□ 1.54
LTBP3-211ENST00000528966 POLRMTO00411 1230 aaKnown RBP24.68■■□□□ 1.54
LTBP3-211ENST00000528966 PTCD1O75127 700 aaKnown RBP24.68■■□□□ 1.54
LTBP3-211ENST00000528966 CDCA8Q53HL2 280 aa24.68■■□□□ 1.54
LTBP3-211ENST00000528966 TIAM2Q8IVF5 1701 aa24.67■■□□□ 1.54
LTBP3-211ENST00000528966 HSP90AB1P08238 724 aaKnown RBP24.67■■□□□ 1.54
LTBP3-211ENST00000528966 CABP4P57796 275 aa24.67■■□□□ 1.54
LTBP3-211ENST00000528966 AFDNP55196 1824 aaKnown RBP24.67■■□□□ 1.54
LTBP3-211ENST00000528966 GLTPD2A6NH11 291 aa24.66■■□□□ 1.54
LTBP3-211ENST00000528966 VEGFAP15692 232 aaPredicted RBP24.66■■□□□ 1.54
LTBP3-211ENST00000528966 TM4SF1P30408 202 aa24.66■■□□□ 1.54
LTBP3-211ENST00000528966 DLEC1Q9Y238 1755 aa24.66■■□□□ 1.54
LTBP3-211ENST00000528966 LMNB1P20700 586 aa24.64■■□□□ 1.54
LTBP3-211ENST00000528966 ZNF530Q6P9A1 599 aaPredicted RBP24.63■■□□□ 1.53
LTBP3-211ENST00000528966 INTS5Q6P9B9 1019 aaKnown RBP24.63■■□□□ 1.53
LTBP3-211ENST00000528966 NRXN2Q9P2S2 1712 aa24.63■■□□□ 1.53
LTBP3-211ENST00000528966 PLEKHO1Q53GL0 409 aaPredicted RBP24.61■■□□□ 1.53
LTBP3-211ENST00000528966 POTECB2RU33 542 aa24.6■■□□□ 1.53
LTBP3-211ENST00000528966 NFATC2IPQ8NCF5 419 aa24.6■■□□□ 1.53
LTBP3-211ENST00000528966 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
LTBP3-211ENST00000528966 MTHFSP49914 203 aa24.59■■□□□ 1.53
LTBP3-211ENST00000528966 USPL1Q5W0Q7 1092 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms