RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 ITGB4P16144 1822 aa26.79■■□□□ 1.88
COLCA2-203ENST00000528846 IL13P35225 146 aa26.79■■□□□ 1.88
COLCA2-203ENST00000528846 MTHFSP49914 203 aa26.77■■□□□ 1.88
COLCA2-203ENST00000528846 CABP4P57796 275 aa26.77■■□□□ 1.88
COLCA2-203ENST00000528846 C4BP0C0L5 1744 aa26.76■■□□□ 1.88
COLCA2-203ENST00000528846 COL24A1Q17RW2 1714 aa26.76■■□□□ 1.88
COLCA2-203ENST00000528846 SSFA2P28290 1259 aa26.76■■□□□ 1.87
COLCA2-203ENST00000528846 C1orf141Q5JVX7 400 aa26.76■■□□□ 1.87
COLCA2-203ENST00000528846 UTRNP46939 3433 aa26.76■■□□□ 1.87
COLCA2-203ENST00000528846 GNPATO15228 680 aa26.75■■□□□ 1.87
COLCA2-203ENST00000528846 PER1O15534 1290 aaPredicted RBP26.75■■□□□ 1.87
COLCA2-203ENST00000528846 RBM42Q9BTD8 480 aaKnown RBP26.75■■□□□ 1.87
COLCA2-203ENST00000528846 CC2D1BQ5T0F9 858 aaKnown RBP26.74■■□□□ 1.87
COLCA2-203ENST00000528846 ZNF784Q8NCA9 323 aaPredicted RBP26.74■■□□□ 1.87
COLCA2-203ENST00000528846 SLC4A9Q96Q91 983 aa26.72■■□□□ 1.87
COLCA2-203ENST00000528846 CD2APQ9Y5K6 639 aa26.72■■□□□ 1.87
COLCA2-203ENST00000528846 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
COLCA2-203ENST00000528846 KDM6AO15550 1401 aaPredicted RBP26.71■■□□□ 1.87
COLCA2-203ENST00000528846 KDRP35968 1356 aa26.7■■□□□ 1.86
COLCA2-203ENST00000528846 NFATC2IPQ8NCF5 419 aa26.69■■□□□ 1.86
COLCA2-203ENST00000528846 YBX3P16989 372 aaKnown RBP eCLIP26.68■■□□□ 1.86
COLCA2-203ENST00000528846 CNGB1Q14028 1251 aaPredicted RBP26.68■■□□□ 1.86
COLCA2-203ENST00000528846 RTCBQ9Y3I0 505 aaKnown RBP26.68■■□□□ 1.86
COLCA2-203ENST00000528846 HMOX1P09601 288 aa26.67■■□□□ 1.86
COLCA2-203ENST00000528846 TRAPPC3LQ5T215 181 aa26.67■■□□□ 1.86
COLCA2-203ENST00000528846 GRIN3BO60391 1043 aa26.66■■□□□ 1.86
COLCA2-203ENST00000528846 PTCD1O75127 700 aaKnown RBP26.66■■□□□ 1.86
COLCA2-203ENST00000528846 DIAPH1O60610 1272 aaKnown RBP26.65■■□□□ 1.86
COLCA2-203ENST00000528846 AKAP4Q5JQC9 854 aa26.65■■□□□ 1.86
COLCA2-203ENST00000528846 RC3H1Q5TC82 1133 aaKnown RBP26.65■■□□□ 1.86
COLCA2-203ENST00000528846 UBR3Q6ZT12 1888 aa26.62■■□□□ 1.85
COLCA2-203ENST00000528846 GOLGB1Q14789 3259 aaKnown RBP26.62■■□□□ 1.85
COLCA2-203ENST00000528846 CNTNAP4Q9C0A0 1308 aa26.62■■□□□ 1.85
COLCA2-203ENST00000528846 ARHGEF1Q92888 912 aaKnown RBP26.61■■□□□ 1.85
COLCA2-203ENST00000528846 LGR6Q9HBX8 967 aa26.61■■□□□ 1.85
COLCA2-203ENST00000528846 RPS6KA4O75676 772 aa26.6■■□□□ 1.85
COLCA2-203ENST00000528846 MMP10P09238 476 aa26.6■■□□□ 1.85
COLCA2-203ENST00000528846 ADRA2BP18089 450 aa26.59■■□□□ 1.85
COLCA2-203ENST00000528846 RFC4P35249 363 aa26.59■■□□□ 1.85
COLCA2-203ENST00000528846 NLGN1Q8N2Q7 840 aa26.58■■□□□ 1.85
COLCA2-203ENST00000528846 SLC52A2Q9HAB3 445 aa26.58■■□□□ 1.85
COLCA2-203ENST00000528846 NPC1L1Q9UHC9 1359 aa26.58■■□□□ 1.84
COLCA2-203ENST00000528846 RNMTO43148 476 aaKnown RBP26.57■■□□□ 1.84
COLCA2-203ENST00000528846 MTHFSDQ2M296 383 aaKnown RBP26.57■■□□□ 1.84
COLCA2-203ENST00000528846 WWC3Q9ULE0 1092 aa26.57■■□□□ 1.84
COLCA2-203ENST00000528846 CRKLP46109 303 aaKnown RBP26.56■■□□□ 1.84
COLCA2-203ENST00000528846 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
COLCA2-203ENST00000528846 GYS1P13807 737 aa26.54■■□□□ 1.84
COLCA2-203ENST00000528846 CHD4Q14839 1912 aa26.53■■□□□ 1.84
COLCA2-203ENST00000528846 SLC39A6Q13433 755 aa26.52■■□□□ 1.84
COLCA2-203ENST00000528846 ZNF831Q5JPB2 1677 aa26.51■■□□□ 1.83
COLCA2-203ENST00000528846 DNAJC10Q8IXB1 793 aa26.5■■□□□ 1.83
COLCA2-203ENST00000528846 INTS5Q6P9B9 1019 aaKnown RBP26.49■■□□□ 1.83
COLCA2-203ENST00000528846 PARP3Q9Y6F1 533 aa26.49■■□□□ 1.83
COLCA2-203ENST00000528846 SRP68Q9UHB9 627 aaKnown RBP26.48■■□□□ 1.83
COLCA2-203ENST00000528846 CCDC87Q9NVE4 849 aa26.47■■□□□ 1.83
COLCA2-203ENST00000528846 C1QTNF8P60827 252 aa26.46■■□□□ 1.83
COLCA2-203ENST00000528846 TGFB2P61812 414 aa26.46■■□□□ 1.83
COLCA2-203ENST00000528846 COL3A1P02461 1466 aaPredicted RBP26.46■■□□□ 1.83
COLCA2-203ENST00000528846 COL5A3P25940 1745 aaPredicted RBP26.45■■□□□ 1.83
COLCA2-203ENST00000528846 CFAP53Q96M91 514 aa26.45■■□□□ 1.82
COLCA2-203ENST00000528846 USP42Q9H9J4 1324 aaKnown RBP26.44■■□□□ 1.82
COLCA2-203ENST00000528846 A0A0G2JLW4 131 aa26.44■■□□□ 1.82
COLCA2-203ENST00000528846 GIGYF1O75420 1035 aaPredicted RBP26.44■■□□□ 1.82
COLCA2-203ENST00000528846 CYP19A1P11511 503 aaPredicted RBP26.44■■□□□ 1.82
COLCA2-203ENST00000528846 FKBP8Q14318 412 aa26.44■■□□□ 1.82
COLCA2-203ENST00000528846 GAS2L2Q8NHY3 880 aa26.44■■□□□ 1.82
COLCA2-203ENST00000528846 SCN11AQ9UI33 1791 aa26.43■■□□□ 1.82
COLCA2-203ENST00000528846 CICQ96RK0 1608 aaPredicted RBP26.43■■□□□ 1.82
COLCA2-203ENST00000528846 MRC1P22897 1456 aa26.42■■□□□ 1.82
COLCA2-203ENST00000528846 GNAT3A8MTJ3 354 aa26.42■■□□□ 1.82
COLCA2-203ENST00000528846 ZNF316A6NFI3 1004 aaPredicted RBP26.41■■□□□ 1.82
COLCA2-203ENST00000528846 ZPR1O75312 459 aa26.41■■□□□ 1.82
COLCA2-203ENST00000528846 IL17REQ8NFR9 667 aa26.41■■□□□ 1.82
COLCA2-203ENST00000528846 PXDNLA1KZ92 1463 aa26.41■■□□□ 1.82
COLCA2-203ENST00000528846 DPEP1P16444 411 aa26.4■■□□□ 1.82
COLCA2-203ENST00000528846 TEFQ10587 303 aa26.4■■□□□ 1.82
COLCA2-203ENST00000528846 TTC5Q8N0Z6 440 aa26.4■■□□□ 1.82
COLCA2-203ENST00000528846 VSIG10Q8N0Z9 540 aa26.4■■□□□ 1.82
COLCA2-203ENST00000528846 BCS1LQ9Y276 419 aa26.4■■□□□ 1.82
COLCA2-203ENST00000528846 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
COLCA2-203ENST00000528846 SOS1Q07889 1333 aaPredicted RBP26.39■■□□□ 1.82
COLCA2-203ENST00000528846 C10orf71Q711Q0 1435 aa26.39■■□□□ 1.82
COLCA2-203ENST00000528846 USPL1Q5W0Q7 1092 aa26.39■■□□□ 1.82
COLCA2-203ENST00000528846 NUDCQ9Y266 331 aa26.39■■□□□ 1.82
COLCA2-203ENST00000528846 ATP10DQ9P241 1426 aa26.39■■□□□ 1.81
COLCA2-203ENST00000528846 PPP2R1AP30153 589 aa26.38■■□□□ 1.81
COLCA2-203ENST00000528846 PRKAR2BP31323 418 aa26.38■■□□□ 1.81
COLCA2-203ENST00000528846 DDR1Q08345 913 aa26.38■■□□□ 1.81
COLCA2-203ENST00000528846 PHACTR3Q96KR7 559 aa26.38■■□□□ 1.81
COLCA2-203ENST00000528846 TJP1Q07157 1748 aa26.38■■□□□ 1.81
COLCA2-203ENST00000528846 ZBTB1Q9Y2K1 713 aa26.37■■□□□ 1.81
COLCA2-203ENST00000528846 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
COLCA2-203ENST00000528846 TM4SF1P30408 202 aa26.36■■□□□ 1.81
COLCA2-203ENST00000528846 RSPH6AQ9H0K4 717 aa26.36■■□□□ 1.81
COLCA2-203ENST00000528846 SENP3-EIF4A1A0A087X0R7 540 aa26.35■■□□□ 1.81
COLCA2-203ENST00000528846 STARD3NLO95772 234 aa26.35■■□□□ 1.81
COLCA2-203ENST00000528846 U2AF1L5P0DN76 240 aaPredicted RBP26.35■■□□□ 1.81
COLCA2-203ENST00000528846 U2AF1Q01081 240 aaKnown RBP eCLIP26.35■■□□□ 1.81
COLCA2-203ENST00000528846 ZNF526Q8TF50 670 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms