RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 CABP4P57796 275 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 CCDC183Q5T5S1 534 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 FANCAO15360 1455 aa12.33□□□□□ -0.44
PKNOX2-202ENST00000526955 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 AIMP1Q12904 312 aaKnown RBP12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 DHX37Q8IY37 1157 aaKnown RBP12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 ANKRD44Q8N8A2 993 aa12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 RILPL2Q969X0 211 aa12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 KIF2CQ99661 725 aa12.32□□□□□ -0.44
PKNOX2-202ENST00000526955 USP32Q8NFA0 1604 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 ZFYVE16Q7Z3T8 1539 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 SDSP20132 328 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 ANAPC15P60006 121 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 TRDNQ13061 729 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 ABCC4O15439 1325 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 MYRIPQ8NFW9 859 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
PKNOX2-202ENST00000526955 FYB1O15117 783 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 IFIT2P09913 472 aaKnown RBP12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 CEP89Q96ST8 783 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 ZC3H6P61129 1189 aaKnown RBP12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 HSP90AB4PQ58FF6 505 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 GTPBP4Q9BZE4 634 aaKnown RBP12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 CCT4P50991 539 aaKnown RBP12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 SMC3Q9UQE7 1217 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 PTPRCP08575 1304 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 PTCH1Q13635 1447 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 TAF3Q5VWG9 929 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 MBIPQ9NS73 344 aa12.3□□□□□ -0.44
PKNOX2-202ENST00000526955 ARAP3Q8WWN8 1544 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 MYO3AQ8NEV4 1616 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 NOLC1Q14978 699 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 FOXD4L6Q3SYB3 417 aaPredicted RBP12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 FOXD4L3Q6VB84 417 aaPredicted RBP12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 SHPRHQ149N8 1683 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 PDCL2Q8N4E4 241 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 ZGPATQ8N5A5 531 aaKnown RBP12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 CDK19Q9BWU1 502 aa12.29□□□□□ -0.44
PKNOX2-202ENST00000526955 ADGRB2O60241 1585 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 GNAI3P08754 354 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 TMEM63CQ9P1W3 806 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 IKQ13123 557 aaPredicted RBP12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 GNAI2P04899 355 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 CEBPAP49715 358 aaPredicted RBP12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 PIBF1Q8WXW3 757 aa12.28□□□□□ -0.44
PKNOX2-202ENST00000526955 LRRCC1Q9C099 1032 aa12.27□□□□□ -0.44
PKNOX2-202ENST00000526955 ERICH2A1L162 156 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 CYP2E1P05181 493 aaPredicted RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 ZNF771Q7L3S4 317 aaPredicted RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 GNL3LQ9NVN8 582 aaKnown RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 PIK3R4Q99570 1358 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 CCDC192P0DO97 292 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 EFCAB6Q5THR3 1501 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 MED14O60244 1454 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 ADCY5O95622 1261 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 USP25Q9UHP3 1055 aa12.27□□□□□ -0.45
PKNOX2-202ENST00000526955 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
PKNOX2-202ENST00000526955 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
PKNOX2-202ENST00000526955 BRD1O95696 1058 aa12.26□□□□□ -0.45
PKNOX2-202ENST00000526955 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
PKNOX2-202ENST00000526955 SMARCA5O60264 1052 aaPredicted RBP12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 PRDM10Q9NQV6 1147 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 UBE2HP62256 183 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 CEP85Q6P2H3 762 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 CCDC61Q9Y6R9 512 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 MX1P20591 662 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 TBC1D2BQ9UPU7 963 aa12.25□□□□□ -0.45
PKNOX2-202ENST00000526955 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 TSPYL6Q8N831 410 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 KIF20AO95235 890 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 PDE1AP54750 535 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 TPM4P67936 248 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 CBX1P83916 185 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 MSH6P52701 1360 aa12.24□□□□□ -0.45
PKNOX2-202ENST00000526955 DEPDC5O75140 1603 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms